DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.401e-21
Identity = 70/221 (31.67%), Postives = 109/221 (49.32%), Query Frame = 1
Query:   40 FRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYS-TVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF--KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWK 693
            F  + +  N   L I   L +FQQ TG  ++++YA  + +T GF  +A     +VI G   +L T V++  VD +GRR LL+           V  I L + +         GF ++ V  +  ++  +  S+GP+ WL+ SE FPL TR  G S+ V  N     ++  AF S L  F     +FL F G  L+   FV  ++PETK + +EE+  ++ K
Sbjct:  348 FLEVFQGPNLKALTIGGGLVLFQQITGQPSVLYYAGSILQTAGFSAAADATRVSVIIGVFKLLMTWVAVAKVDDLGRRPLLIGG---------VSGIALSLFLLSAYYKFLGGFPLVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAF-SPLKEFLGAENLFLLFGGIALVSLLFVILVVPETKGLSLEEIESKILK 558          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.401e-21
Identity = 67/226 (29.65%), Postives = 117/226 (51.77%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYS-TVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSC-FVFFLLPETKNVPIEEM 675
            E S + ++ +  F  L + +    L IA  L +FQQ TG  ++++YAP + +T GF  +A     +++ G + ++ T VS+  +D+VGRR LLL     M +S      +LG          +     + V  +  ++  +  S+GP+GWL+ SE FPL+ R  G S+ V VN     ++  AF  +      GI     G + ++S  F+++++PETK + +EE+
Sbjct:  282 ELSLVGEDKEATFGELFRGKCLKALTIAGGLVLFQQITGQPSVLYYAPSILQTAGFSAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVIS----LFLLGSYYM-----FYKNVPAVAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKELLGAGILFCAFGVICVVSLFFIYYIVPETKGLTLEEI 498          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: RGT2_YEAST (High-affinity glucose transporter RGT2 OS=Saccharomyces cerevisiae GN=RGT2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.401e-21
Identity = 69/222 (31.08%), Postives = 116/222 (52.25%), Query Frame = 1
Query:   64 NRPQLVI----AVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTF---VIAQAFLSMLCHFKF---GIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPP 699
            NRP+ ++     +A+Q FQQ +GIN I +Y    F   G   S  +  + I+ AVNV  ++  +Y VD++GRR +LL  G+ M ++  VIAI+ G+     SE      + +++  IC FI+AF+ +WG + W++ +E +PL  RS   ++    N L  F   +I    + +  H       IF  + G  ++    V+F + ET+ + +EE+ E   K P
Sbjct:  350 NRPKQILRIFTGIAIQAFQQASGINFIFYYGVNFFNNTGVDNSYLV--SFISYAVNVAFSIPGMYLVDRIGRRPVLLAGGVIMAIANLVIAIV-GV-----SEGKTVVASKIMIAFICLFIAAFSATWGGVVWVVSAELYPLGVRSKCTAICAAANWLVNFTCALITPYIVDVGSHTSSMGPKIFFIWGGLNVVAVIVVYFAVYETRGLTLEEIDELFRKAP 563          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR3_MOUSE (Solute carrier family 2, facilitated glucose transporter member 3 OS=Mus musculus GN=Slc2a3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.401e-21
Identity = 64/225 (28.44%), Postives = 115/225 (51.11%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRNRPQ-LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            E+ R+++E +     L +  N  Q L+I++ LQ+ QQ +GINA+ +Y+  +FK  G      +Y+T+  G VN + T+VS++ V++ GRR L +     M +    + I L +K      D +   + + ++ I  +++ F    GP+ W I +E F    R A  +V  C N    F++   F S   +    +F+ F+ +++    F FF +PETK    E++
Sbjct:  245 ESVRMSQEKQVTVLELFRSPNYVQPLLISIVLQLSQQLSGINAVFYYSTGIFKDAGV--QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMTISLLLK------DDYEAMSFVCIVAILIYVAFFEIGPGPIPWFIVAELFSQGPRPAAIAVAGCCNWTSNFLVGMLFPSAAAYLGAYVFIIFAAFLIFFLIFTFFKVPETKGRTFEDI 461          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR2_RAT (Solute carrier family 2, facilitated glucose transporter member 2 OS=Rattus norvegicus GN=Slc2a2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.401e-21
Identity = 64/203 (31.53%), Postives = 104/203 (51.23%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            R  +V+A+ L + QQ +GIN I +Y+  +F+T G   S  +Y+T+  GA+N++ T VS+  V+K GRR L L   I MF     +++ L +       D  T  + + +  I  F+S F    GP+ W + +E F    R    ++    N +  F+IA  F  +       +F  F+G VL+ + F FF +PETK    +E+
Sbjct:  299 RQPIVVALMLHLAQQFSGINGIFYYSTSIFQTAGI--SQPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLAGMIGMFFCAVFMSLGLVLL------DKFTWMSYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFIIALCFQYIADFLGPYVFFLFAGVVLVFTLFTFFKVPETKGKSFDEI 493          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT9_YEAST (Hexose transporter HXT9 OS=Saccharomyces cerevisiae GN=HXT9 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.136e-21
Identity = 62/220 (28.18%), Postives = 112/220 (50.91%), Query Frame = 1
Query:   73 QLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV----KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWLWKN 714
            ++++ V +Q  QQ TG N   +Y   +FK++G     S  +++I G VN  S+ +++Y++++ GRR  LL     M     V A +   K+      H +    G    +++    FI +FA +W    ++I SETFPL  +S G ++    N ++ F+I+    F++   +F +G    F G ++    +VFF +PETK + +EE+     +    WK+
Sbjct:  320 RVLMGVMIQSLQQLTGDNYFFYYGTTIFKSVGL--KDSFQTSIIIGVVNFFSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQGAGNCMIVFTMFFIFSFATTWAGGCYVIVSETFPLRVKSRGMAIATAANWMWGFLISFFTPFITGAINFYYG--YVFLGCLVFAYFYVFFFVPETKGLTLEEVNTMWLEGVPAWKS 535          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT11_YEAST (Hexose transporter HXT11 OS=Saccharomyces cerevisiae GN=HXT11 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.136e-21
Identity = 62/220 (28.18%), Postives = 112/220 (50.91%), Query Frame = 1
Query:   73 QLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV----KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWLWKN 714
            ++++ V +Q  QQ TG N   +Y   +FK++G     S  +++I G VN  S+ +++Y++++ GRR  LL     M     V A +   K+      H +    G    +++    FI +FA +W    ++I SETFPL  +S G ++    N ++ F+I+    F++   +F +G    F G ++    +VFF +PETK + +EE+     +    WK+
Sbjct:  320 RVLMGVMIQSLQQLTGDNYFFYYGTTIFKSVGL--KDSFQTSIIIGVVNFFSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQGAGNCMIVFTMFFIFSFATTWAGGCYVIVSETFPLRVKSRGMAIATAANWMWGFLISFFTPFITGAINFYYG--YVFLGCLVFAYFYVFFFVPETKGLTLEEVNTMWLEGVPAWKS 535          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: YIR0_YEAST (Putative transporter-like protein YIL170W OS=Saccharomyces cerevisiae GN=YIL170W PE=5 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.096e-21
Identity = 62/220 (28.18%), Postives = 112/220 (50.91%), Query Frame = 1
Query:   73 QLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV----KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWLWKN 714
            ++++ V +Q  QQ TG N   +Y   +FK++G     S  +++I G VN  S+ +++Y++++ GRR  LL     M     V A +   K+      H +    G    +++    FI +FA +W    ++I SETFPL  +S G ++    N ++ F+I+    F++   +F +G    F G ++    +VFF +PETK + +EE+     +    WK+
Sbjct:  210 RVLMGVIIQSLQQLTGDNYFFYYGTTIFKSVGL--KDSFQTSIIIGVVNFFSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQGAGNCMIVFTMFFIFSFATTWAGGCFVIVSETFPLRAKSRGMAIATAANWMWGFLISFFTPFITGAINFYYG--YVFLGCLVFAYFYVFFFVPETKGLTLEEVNTMWLEGVPAWKS 425          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.350e-21
Identity = 69/227 (30.40%), Postives = 120/227 (52.86%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFG--GSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMS-CFVFFLLPETKNVPIEEM 675
            E + + ++ +  F  L + +    L+I   L +FQQ TG  ++++YAP + +T GF   G A+  S ++ G + ++ T V++  +D++GRR LLL     M +S      +LG      S        V+ V+ +  ++  +  S+GP+GWL+ SE FPL+ R  G S+ V VN     ++  AF  +      GI     G + ++S  F+FF++PETK + +EE+
Sbjct:  282 ELTFVGEDKEVTFGELFQGKCLKALIIGGGLVLFQQITGQPSVLYYAPSILQTAGFSAAGDATRVS-ILLGLLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVS----LFLLGSYYLFFSAS-----PVVAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKELLGAGILFCGFGVICVLSLVFIFFIVPETKGLTLEEI 498          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR2_MOUSE (Solute carrier family 2, facilitated glucose transporter member 2 OS=Mus musculus GN=Slc2a2 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 9.126e-21
Identity = 64/203 (31.53%), Postives = 103/203 (50.74%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            R  +++A+ L + QQ +GIN I +Y+  +F+T G   S  +Y+T+  GA+N++ T VS+  V+K GRR L L   I MF     +++ L +       D     + + +  I  F+S F    GP+ W + +E F    R    ++    N +  FVIA  F  +       +F  F+G VL+ + F FF +PETK    EE+
Sbjct:  300 RQPILVALMLHMAQQFSGINGIFYYSTSIFQTAGI--SQPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLTGMIGMFFCTIFMSVGLVLL------DKFAWMSYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFVIALCFQYIADFLGPYVFFLFAGVVLVFTLFTFFKVPETKGKSFEEI 494          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
XYLL3_ARATH2.401e-2131.67D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
XYLL1_ARATH2.401e-2129.65D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
RGT2_YEAST2.401e-2131.08High-affinity glucose transporter RGT2 OS=Saccharo... [more]
GTR3_MOUSE2.401e-2128.44Solute carrier family 2, facilitated glucose trans... [more]
GTR2_RAT2.401e-2131.53Solute carrier family 2, facilitated glucose trans... [more]
HXT9_YEAST3.136e-2128.18Hexose transporter HXT9 OS=Saccharomyces cerevisia... [more]
HXT11_YEAST3.136e-2128.18Hexose transporter HXT11 OS=Saccharomyces cerevisi... [more]
YIR0_YEAST4.096e-2128.18Putative transporter-like protein YIL170W OS=Sacch... [more]
XYLL2_ARATH5.350e-2130.40D-xylose-proton symporter-like 2 OS=Arabidopsis th... [more]
GTR2_MOUSE9.126e-2131.53Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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