DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR3_RABIT (Solute carrier family 2, facilitated glucose transporter member 3 (Fragment) OS=Oryctolagus cuniculus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.192e-20
Identity = 63/226 (27.88%), Postives = 117/226 (51.77%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            E++R+ +E +     L +  + R  ++I++ LQ+ QQ +GINA+ +Y+  +FK  G      +Y+T+  G VN + T+VS++ V++ GRR L L     M L   ++ + L +K K      +   +++ +  I  + + F    GP+ WLI +  F  + R A  +V  C N    F++   F S   +    +F+ F+ +++    F FF +PET+    E++T
Sbjct:  150 ESARMRQEKQVTVLELFRAPSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGV--REPIYATIGAGVVNTIFTIVSVFLVERAGRRTLHLIGLGGMALCSVLMTVSLLLKXK------YDTMSLVCIAAILIYAAFFEIGPGPIPWLIVTGLFSQDPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLGAYVFVIFAVFLVAFFIFTFFKVPETRGRTFEDIT 367          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR2_HUMAN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Homo sapiens GN=SLC2A2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.033e-20
Identity = 64/209 (30.62%), Postives = 106/209 (50.72%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWK 693
            R  +++A+ L + QQ +GIN I +Y+  +F+T G   S  +Y+T+  GAVN++ T VS++ V+K GRR L L     MF+    +++ L +  K       +  + + +I I  F+S F    GP+ W + +E F    R A  ++    N    F++A  F  +       +F  F+G +L  + F FF +PETK    EE+     K
Sbjct:  301 RQPILVALMLHVAQQFSGINGIFYYSTSIFQTAGI--SKPVYATIGVGAVNMVFTAVSVFLVEKAGRRSLFLIGMSGMFVCAIFMSVGLVLLNK------FSWMSYVSMIAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPAALAIAAFSNWTCNFIVALCFQYIADFCGPYVFFLFAGVLLAFTLFTFFKVPETKGKSFEEIAAEFQK 501          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ERDL1_ARATH (Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.033e-20
Identity = 65/227 (28.63%), Postives = 118/227 (51.98%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTE 681
            VE SR  +E +   ++L   +N   L+I + L + QQ  G +AI  YA  +F T GF    S   T I   + V  +++ +++VD+ GRR LL+ + I + +   +I   L   +++H  D     + ++++ +  ++ +F    G L W+I SE FP+  +    S+    N  F+++I  +F  M+    FG +  F+G  L+   FV+ L+PETK   +E++ +
Sbjct:  240 VETSR--RESRSGLKDLFNMKNAHPLIIGLGLMLLQQFCGSSAISAYAARIFDTAGF---PSDIGTSILAVILVPQSIIVMFAVDRCGRRPLLMSSSIGLCICSFLIG--LSYYLQNHG-DFQEFCSPILIVGLVGYVLSFGIGLGGLPWVIMSEVFPVNVKITAGSLVTVSNWFFSWIIIFSFNFMMQWSAFGTYFIFAGVSLMSFVFVWTLVPETKGRTLEDIQQ 458          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT4_YEAST (Low-affinity glucose transporter HXT4 OS=Saccharomyces cerevisiae GN=HXT4 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.655e-20
Identity = 74/266 (27.82%), Postives = 125/266 (46.99%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHT--GFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT----ERV--WK-PPWLWKN-----FMVDHGFDDDEP 750
            VEA ++A           K +   +L++   +Q  QQ TG N   +Y   +F  +G     S  ++++ G VN  ST V I+ V++ GRR  LL     M     V A +   ++  + +   +  G    +++  C ++  FA +W P+ +++ SETFPL  +S   ++    N ++ F+I     F+S    F +G    F G ++    +VFF +PETK + +EE+     E V  WK P W+  N     +  D    DD+P
Sbjct:  306 VEAEKLAGNASWGEIFSTKTKVFQRLIMGAMIQSLQQLTGDNYFFYYGTTVFTAVGL--EDSFETSIVLGIVNFASTFVGIFLVERYGRRRCLLWGAASMTACMVVFASVGVTRLWPNGKKNGSSKGAGNCMIVFTCFYLFCFATTWAPIPFVVNSETFPLRVKSKCMAIAQACNWIWGFLIGFFTPFISGAIDFYYG--YVFMGCLVFSYFYVFFFVPETKGLTLEEVNTLWEEGVLPWKSPSWVPPNKRGTDYNADDLMHDDQP 567          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.655e-20
Identity = 64/226 (28.32%), Postives = 115/226 (50.88%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRNRPQ-LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            E+ R+++E +     L K  +  Q L+I+V LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+  G VN + T+VS++ V++ GRR L +     M +    + I L +K      D +   + + ++ I  +++ F    GP+ W I +E F    R A  +V  C N    F++   F S   +    +F+ F+ +++    F  F +PETK    E++T
Sbjct:  245 ESIRMSQEKQVTVLELFKSPSYFQPLLISVVLQLSQQFSGINAVFYYSTGIFQDAGV--QEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMTISLLLK------DEYEAMSFVCIVAILVYVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGMFFPSAAAYLGAYVFIIFAAFLVFFLIFTSFKVPETKGRTFEDIT 462          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR3_CHICK (Solute carrier family 2, facilitated glucose transporter member 3 OS=Gallus gallus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.655e-20
Identity = 67/228 (29.39%), Postives = 116/228 (50.88%), Query Frame = 1
Query:    4 EASRIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMT 678
            E++++++E K     L +  N R  ++I++ LQ+ QQ +GINA+ +Y+  +F+  G   +  +Y+T+  G VN + T+VS++ V++ GRR L L     M +   V+ I L +K K            + ++    F++ F    GP+ W I +E F    R A  +V  C N    F++   F     LC     +FL F  ++LI   F +F +PETK    E+++
Sbjct:  246 ESAKMSQEKKATVLELFRSPNYRQPIIISITLQLSQQLSGINAVFYYSTGIFERAGI--TQPVYATIGAGVVNTVFTVVSLFLVERAGRRTLHLVGLGGMAVCAAVMTIALALKEK--------WIRYISIVATFGFVALFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGMLFPYAEKLCGPY--VFLIFLVFLLIFFIFTYFKVPETKGRTFEDIS 461          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ERDL7_ARATH (Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.915e-20
Identity = 58/210 (27.62%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   46 NLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            +L +RR    ++IA  L +FQQ  GIN I FY   +F+  GF     +   +I   + V+ T ++   VD+ GR+ LLL +   + +   + A+   +KV D +   H    VL V+ I  +I +F+   G + W++ SE FP+  +     +   VN    + ++  F  ++    +G FL ++    +   FV  ++PETK   +E++
Sbjct:  254 DLFQRRYIRSVLIAFGLMVFQQFGGINGICFYTSSIFEQAGFPTRLGM---IIYAVLQVVITALNAPIVDRAGRKPLLLVSATGLVIGCLIAAVSFYLKVHDMA---HEAVPVLAVVGIMVYIGSFSAGMGAMPWVVMSEIFPINIKGVAGGMATLVNWFGAWAVSYTFNFLMSWSSYGTFLIYAAINALAIVFVIAIVPETKGKTLEQI 457          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.248e-19
Identity = 62/214 (28.97%), Postives = 109/214 (50.93%), Query Frame = 1
Query:   52 LKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGS-ASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERV 687
            + R  R  + + + LQ  QQ TG+N IM+YAP +FK  GF  +   + +T++ G   + +T +++++VDK GR+  L      M L   V+   L   ++  +    +G + L V M    I+ +A S  P+ W++ SE  PL+ R  G + +   N +   +I   FL++L      G F  ++   +      F+L+PETKNV +E +  ++
Sbjct:  251 INRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCL---MQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETKNVTLEHIERKL 461          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.248e-19
Identity = 62/214 (28.97%), Postives = 109/214 (50.93%), Query Frame = 1
Query:   52 LKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGS-ASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERV 687
            + R  R  + + + LQ  QQ TG+N IM+YAP +FK  GF  +   + +T++ G   + +T +++++VDK GR+  L      M L   V+   L   ++  +    +G + L V M    I+ +A S  P+ W++ SE  PL+ R  G + +   N +   +I   FL++L      G F  ++   +      F+L+PETKNV +E +  ++
Sbjct:  251 INRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCL---MQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETKNVTLEHIERKL 461          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: RCO3_NEUCR (Probable glucose transporter rco-3 OS=Neurospora crassa GN=rco-3 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.834e-19
Identity = 70/237 (29.54%), Postives = 110/237 (46.41%), Query Frame = 1
Query:   94 LQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFG----------IFLFFSGWVLIMSCFVFFLLPETKNVPIE---EMTERV--------WKPPWLWKNFMVDHGFDD 741
            LQ+ QQ TG+N IM+Y    F   G G    +  ++I   +N  ST+  ++ V+  GRR LL+   I M + Q +IA          S +L     VL+   +  +I  FA SWGP+ W++ SE +PL+ R+   S+T   N    F IA     M  +              +F  +  + ++   FV+ ++ ET  + +E   EM ERV        ++P W ++  M D GF D
Sbjct:  288 LQMLQQLTGVNFIMYYGTTFFNNAGVGNPFKI--SLIMQVINTASTIPGLFVVESWGRRRLLMVGAIGMAICQLLIA---AFATASGSNNLSAQNKVLITF-VAIYIFFFAASWGPVVWVVTSEIYPLKVRAKSMSITTASNWFLNFGIAYGTPYMQTNSAASDESSIDLGSKVFFVWGAFCIVAVGFVWCMVYETSKISLEQIDEMYERVDHAWHSRRFEPSWSFQE-MRDLGFSD 517          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
GTR3_RABIT1.192e-2027.88Solute carrier family 2, facilitated glucose trans... [more]
GTR2_HUMAN2.033e-2030.62Solute carrier family 2, facilitated glucose trans... [more]
ERDL1_ARATH2.033e-2028.63Sugar transporter ERD6-like 1 OS=Arabidopsis thali... [more]
HXT4_YEAST2.655e-2027.82Low-affinity glucose transporter HXT4 OS=Saccharom... [more]
GTR3_RAT2.655e-2028.32Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CHICK2.655e-2029.39Solute carrier family 2, facilitated glucose trans... [more]
ERDL7_ARATH5.915e-2027.62Sugar transporter ERD6-like 7 OS=Arabidopsis thali... [more]
ARAE_ECOLI2.248e-1928.97Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO572.248e-1928.97Arabinose-proton symporter OS=Escherichia coli O15... [more]
RCO3_NEUCR3.834e-1929.54Probable glucose transporter rco-3 OS=Neurospora c... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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