DY260573

Overview
NameDY260573
Unique NameDY260573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ERDL2_ARATH (Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.834e-19
Identity = 67/225 (29.78%), Postives = 111/225 (49.33%), Query Frame = 1
Query:    1 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            VE SR  KE +   R+L    N   L+I + L + QQ  G  AI  YA  +F   GF    S   T I   + +  ++V + +VD+ GRR LL+ + I M +    I +   ++     + L    +V++++ +  ++S+F    G L W+I SE FP+  +    S+    N  F ++I  +F  M+     G +  FSG  L+   F++ L+PETK   +EE+
Sbjct:  238 VEISR--KESQSGIRDLFHIGNAHSLIIGLGLMLLQQFCGSAAISAYAARIFDKAGF---PSDIGTTILAVILIPQSIVVMLTVDRWGRRPLLMISSIGMCICSFFIGLSYYLQKNGEFQKL---CSVMLIVGLVGYVSSFGIGLGGLPWVIMSEIFPVNVKITAGSLVTMSNWFFNWIIIYSFNFMIQWSASGTYFIFSGVSLVTIVFIWTLVPETKGRTLEEI 454          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.834e-19
Identity = 71/210 (33.81%), Postives = 105/210 (50.00%), Query Frame = 1
Query:   49 LLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETR-SAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            L +RR    L+I V L   QQ  G + + +YA  LF     GG  S   T +   + V   +++   VDK+GRR LL+ +   M LS  ++++  G +      +L   F  + V+     I +FA   G L W+I +E FP+  + SAG  VTV  N LF ++I   F  ML     G+FL FS        F++FL+PETK   +EE+
Sbjct:  285 LFQRRYAYPLIIGVGLMFLQQLCGSSGVTYYASSLFNK---GGFPSAIGTSVIATIMVPKAMLATVLVDKMGRRTLLMASCSAMGLSALLLSVSYGFQSFGILPELTPIFTCIGVL---GHIVSFAMGMGGLPWIIMAEIFPMNVKVSAGTLVTV-TNWLFGWIITYTFNFMLEWNASGMFLIFSMVSASSIVFIYFLVPETKGRSLEEI 487          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.007e-19
Identity = 62/214 (28.97%), Postives = 109/214 (50.93%), Query Frame = 1
Query:   52 LKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGS-ASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERV 687
            + R  R  + + + LQ  QQ TG+N IM+YAP +FK  GF  +   + +T++ G   + +T +++++VDK GR+  L      M +   V+   L   ++  +    +G + L V M    I+ +A S  P+ W++ SE  PL+ R  G + +   N +   +I   FL++L      G F  ++   +      F+L+PETKNV +E +  R+
Sbjct:  251 VNRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMVATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMAIGTLVLGYCL---MQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDAIGAAGTFWLYTALNVAFIGVTFWLIPETKNVTLEHIERRL 461          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.541e-19
Identity = 66/220 (30.00%), Postives = 108/220 (49.09%), Query Frame = 1
Query:   31 KHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGI--KVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFG-IFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTE 681
            K  F++L     R  + I + + I QQ TG+N+IM+Y   + +  GF   A+L   +  G ++VL+T V I+ + +VGRR +L+       +  T   +++GI   V + S  L      +V+ +  TF++    +  P+ WL+ SE FPL  R  G  VTV    +  F ++  F  +L        F  F G  +    FV   LPETK + +E++ E
Sbjct:  242 KATFKDLSVPWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTG----LIGTTTALLLIGIFSLVLEGSPAL----PYVVLSLTVTFLAFQQGAISPVTWLMLSEIFPLRLRGLGMGVTVFCLWMVNFAVSFTFPILLAAIGLSTTFFIFVGLGICSVLFVKRFLPETKGLSLEQLEE 453          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.116e-18
Identity = 67/218 (30.73%), Postives = 108/218 (49.54%), Query Frame = 1
Query:   58 RRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLL--EAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWL 705
            R +R  L+IAV LQ+ QQ +GINA+ +Y+  +F+T G G  A  Y+T+  G VN + TLVS+  V++ GRR L L   AG+        +A++L  +V           + + ++ I  F++ F    GP+ W I +E F    R A  +V    N    F+I   F  +       +FL F+  +L    F F  +PET+    ++++    + P L
Sbjct:  282 RTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFETAGVGQPA--YATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERV--------PAMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIIGMGFQYVAEAMGPYVFLLFAVLLLGFFIFTFLRVPETRGRTFDQISAAFHRTPSL 489          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.457e-18
Identity = 65/207 (31.40%), Postives = 105/207 (50.72%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCH--FKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTE 681
            R  L I + + I  Q TG+N+IM+Y   + K  GFG  A+L + +  G ++V++ +  I+ V KV RR +LL     + L+ T  A++L I +     D       +V+ +   F++      GP+ WL+ +E FP   R  G  ++V    +  FVI  AF  +L      F  F+F +  VL +  FV+  +PETK   +EE+ E
Sbjct:  254 RRLLWIGIGVAIVNQITGVNSIMYYGTQILKESGFGTKAALIANIGNGLISVIAVIFGIWLVGKVRRRPILL-----IGLAGTTTALLL-IAIFSIVLDGSMALPYVVLSLTVLFLAFMQGCVGPVTWLVIAEIFPQRLRGLGSGISVFFLWILNFVIGFAFPILLSSVGLSFTFFIFVALGVLAIG-FVYKFMPETKGRTLEELEE 453          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: HXT14_YEAST (Hexose transporter HXT14 OS=Saccharomyces cerevisiae GN=HXT14 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.903e-18
Identity = 59/209 (28.23%), Postives = 109/209 (52.15%), Query Frame = 1
Query:   73 QLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMI-CTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKP 696
            +L+I + +  FQQ +GIN   +Y   +FK  G G      +++I  +VN LST++ IY V+K G +  LL     +       A +        +    T F+ +V+I++ C FI  FA + GP+ +++ SE FPL TR+   ++   +N +F F+I+     ++    F +   F+  +L +  F + L+PET+    +E+  ++++P
Sbjct:  341 RLIIGMMIMAFQQLSGINYFFYYGTSVFK--GVGIKDPYITSIILSSVNFLSTILGIYYVEKWGHKTCLLYGSTNLLFYMMTYATV-------GTFGRETDFSNIVLIIVTCCFIFWFAITLGPVTFVLVSELFPLRTRAISMAICTFINWMFNFLISLLTPMIVSKIDFKLGYIFAACLLALIIFSWILVPETRKKNEQEI-NKIFEP 539          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ERDL8_ARATH (Sugar transporter ERD6-like 8 OS=Arabidopsis thaliana GN=At3g05150 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.903e-18
Identity = 59/215 (27.44%), Postives = 110/215 (51.16%), Query Frame = 1
Query:   31 KHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            K    +L+ ++N   +++ V L  FQQ  GIN ++FYA  +F  +  G S +L S + +    VL+ L +   +D++GRR LL+ + + M +   +I     +K    + D+    AV  V++   +I +F+   G + W+I SE FP+  +     +   VN L +++++  F  ++     G F  + G  ++   F+  L+PETK   +EE+
Sbjct:  256 KATLMDLIDKKNIRFVIVGVGLMFFQQFVGINGVIFYAQQIF--VSAGASPTLGSILYSIEQVVLTALGATLLIDRLGRRPLLMASAVGMLIGCLLIGNSFLLKAHGLALDIIPALAVSGVLV---YIGSFSIGMGAIPWVIMSEIFPINLKGTAGGLVTVVNWLSSWLVSFTFNFLMIWSPHGTFYVYGGVCVLAIIFIAKLVPETKGRTLEEI 465          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.903e-18
Identity = 56/213 (26.29%), Postives = 109/213 (51.17%), Query Frame = 1
Query:   40 FRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK-VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEM 675
            F +L +RR    L++ + L   QQ  GIN ++FY+  +F++ G   ++S  +T   G V V++T ++ + VDK GRR+LL+ + I M +S  ++A+   +K       +++   +++ V+ +   + + +   GP+ WLI SE  P+  +    S+   +N   ++++      +L     G F  ++        FV   +PETK   +EE+
Sbjct:  273 FVDLKRRRYYFPLMVGIGLLALQQLGGINGVLFYSSTIFESAGV--TSSNVATFGVGVVQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSMVSVVGVVAMVISCSLGMGPIPWLIMSEILPVNIKGLAGSIATLLNWFVSWLVTMTANMLLAWSSGGTFTLYALVCGFTVVFVSLWVPETKGKTLEEI 483          
BLAST of DY260573 vs. ExPASy Swiss-Prot
Match: GHT3_SCHPO (High-affinity gluconate transporter ght3 OS=Schizosaccharomyces pombe GN=ght3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.246e-18
Identity = 63/221 (28.51%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   67 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV--KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFFLLPETKNVPIEEMTERVWKPPWLWKNF 717
            R +  +   + +F++  G N   +YA  +FK  G G +      VI GA+N  +T  ++Y++D +GRR  L+       +   + A +   K+  K+ + D   G   ++++  C F+ ++  SWGP+GW+I  ETFP+  RS   SV    N L  F+I+    F++    FK G    ++   L  S  +FFL  ETK + +EE+ +        W+++
Sbjct:  263 RYRTCLGFLVMLFRELIGNNYYFYYATQVFK--GTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSICFFIYAAVGDRKLIYKNGTSDHRAGS--VMIVFSCLFLFSYCCSWGPMGWVIVGETFPIRYRSKCASVATSGNWLGNFMISFFTPFINNAIGFKLG--YIYACINLFSSFMIFFLAKETKGLTLEEVNDLYMSNIKPWESY 477          
The following BLAST results are available for this feature:
BLAST of DY260573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
ERDL2_ARATH3.834e-1929.78Sugar transporter ERD6-like 2 OS=Arabidopsis thali... [more]
ERD6_ARATH3.834e-1933.81Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]
ARAE_KLEOX5.007e-1928.97Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
IOLT_BACSU8.541e-1930.00Major myo-inositol transporter iolT OS=Bacillus su... [more]
GTR4_HUMAN1.116e-1830.73Solute carrier family 2, facilitated glucose trans... [more]
YNCC_BACSU1.457e-1831.40Putative metabolite transport protein yncC OS=Baci... [more]
HXT14_YEAST1.903e-1828.23Hexose transporter HXT14 OS=Saccharomyces cerevisi... [more]
ERDL8_ARATH1.903e-1827.44Sugar transporter ERD6-like 8 OS=Arabidopsis thali... [more]
ERDL4_ARATH1.903e-1826.29Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
GHT3_SCHPO3.246e-1828.51High-affinity gluconate transporter ght3 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YP04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260573 ID=DY260573; Name=DY260573; organism=Citrus clementina; type=EST; length=984bp
GTTGAGGCTAGTCGTATAGCCAAAGAAGTAAAGCACCCTTTCAGAAATCT
GCTCAAGCGTAGGAACCGGCCCCAGCTTGTCATTGCTGTTGCCTTGCAGA
TCTTCCAGCAGTGTACAGGAATCAATGCGATCATGTTTTATGCCCCAGTC
CTGTTTAAAACGTTGGGATTTGGCGGCAGTGCTTCTCTTTACTCAACTGT
GATTACAGGGGCAGTTAACGTCCTCTCAACACTAGTATCAATCTACTCGG
TGGACAAAGTGGGACGTCGGATGCTATTACTCGAAGCTGGAATTCAAATG
TTCTTGTCTCAGACTGTGATAGCAATCATACTTGGAATTAAGGTTAAGGA
TCACTCGGAAGATTTACACACTGGCTTTGCCGTCCTAGTGGTTATTATGA
TTTGCACTTTCATCTCTGCCTTTGCTTGGTCTTGGGGACCTCTCGGATGG
CTGATTCCCAGCGAAACATTCCCGTTAGAGACGCGATCAGCTGGACAGAG
TGTTACTGTTTGTGTGAACTTGCTGTTCACTTTTGTGATAGCTCAGGCAT
TCCTTTCAATGCTCTGCCATTTCAAGTTCGGCATCTTCTTGTTCTTCTCC
GGTTGGGTTTTGATCATGTCATGCTTTGTGTTTTTCTTGCTCCCCGAGAC
AAAGAATGTGCCGATTGAAGAGATGACTGAAAGAGTGTGGAAACCGCCTT
GGTTGTGGAAAAATTTTATGGTGGACCATGGTTTTGATGATGATGAACCC
AAAAAAAAATGGGCCTCCCAATGGGTTTGAACCCGTTTCCCCATTGTAAA
TTTAAAAAAGGCTTTAAAAAAGGATGTTGCCAAAAAAAAAATTAAAACCT
TATTCCTTAAGGAAAAAAAAATATTGGGGGGCCGTCCCTTGGTCCCGGAA
GAAATAATTGGTCCAACCCTTTAAAAAAAAGGTTCCATCCCGGAACCTCC
CGGCCCCCCCTTTTTCCCACCAAGGGGAGTTTTC
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