DY260576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y3959_PSEA6 (UPF0061 protein Patl_3959 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=Patl_3959 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.275e-30 Identity = 68/131 (51.91%), Postives = 86/131 (65.65%), Query Frame = 1 Query: 382 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTT 774 V NPQLV + ++ D+L+L F + G T +AQ YGGHQFG W LGDGR + LGE + + W+L LKGAG TPYSRFADG AVLRS++RE+L SEA+H +GIPT+RALCL T+ Sbjct: 23 VANPQLVEVNHTLRDALQLPASWFTQSSIMSMLFGNTSSFTTHSFAQKYGGHQFGGWNPDLGDGRGVLLGEAKDKFGKSWDLHLKGAGPTPYSRFADGRAVLRSTLREYLASEALHHMGIPTSRALCLITS 153
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_SHIFL (UPF0061 protein ydiU OS=Shigella flexneri GN=ydiU PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.880e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQF +WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNAAG--VWGGETLLPGMSPLAQVYSGHQFVVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETVEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_SALCH (UPF0061 protein ydiU OS=Salmonella choleraesuis GN=ydiU PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.880e-30 Identity = 80/175 (45.71%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + + TP +E GA + R+A S Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVCSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVAS---DTPVQ----RETQETGAMLMRLAQS 176
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECO81 (UPF0061 protein ydiU OS=Escherichia coli O81 (strain ED1a) GN=ydiU PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.880e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P E GA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETVESGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y965_RHOS4 (UPF0061 protein RHOS4_09650 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=RHOS4_09650 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.880e-30 Identity = 79/163 (48.47%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 P+A V P+L+ + +A+ L LDP ER +F SG GA P AQ Y GHQFG ++ QLGDGRA+ +GEI + R +LQLKG+G+TP+SR ADG A L +RE+L EAMH LGIPTTRAL TG+ P + G E PGA + R+A S Sbjct: 21 PAAPVPAPRLLRLNRPLAEELGLDPDLLEREGAEIF-SGRRLPEGAHPLAQAYAGHQFGGFSPQLGDGRALLIGEITDRAGRRRDLQLKGSGRTPFSRGADGKAALGPVLREYLVGEAMHGLGIPTTRALAAVATGE---PLLRQEG---ERPGAILTRVAAS 176
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y687_RHOSK (UPF0061 protein RSKD131_0687 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=RSKD131_0687 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.880e-30 Identity = 79/163 (48.47%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 P+A V P+L+ + +A+ L LDP ER +F SG GA P AQ Y GHQFG ++ QLGDGRA+ +GEI + R +LQLKG+G+TP+SR ADG A L +RE+L EAMH LGIPTTRAL TG+ P + G E PGA + R+A S Sbjct: 21 PAAPVPAPRLLRLNRPLAEELGLDPDLLEREGAEIF-SGRRLPEGAHPLAQAYAGHQFGGFSPQLGDGRALLIGEITDRAGRRRDLQLKGSGRTPFSRGADGKAALGPVLREYLVGEAMHGLGIPTTRALAAVATGE---PLLRQEG---ERPGAILTRVAAS 176
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y2131_KLEP7 (UPF0061 protein KPN78578_21310 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=KPN78578_21310 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.880e-30 Identity = 82/175 (46.86%), Postives = 101/175 (57.71%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ ++N +L+ + +A L + F + G L G P AQ Y GHQFG WAGQLGDGR I LGE R++ LKGAG TPYSR DG AVLRS+IRE L SEAMH LGIPTTRAL + T+ TP + EPGA + R+A S Sbjct: 10 RDELPDFYTSLSPTP-LDNARLIWRNAPLAQQLGVPDALFAPESGAGVWGGEALLPGMSPLAQVYSGHQFGAWAGQLGDGRGILLGEQQLADGRRYDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHALGIPTTRALAMVTS---DTPVY----RERVEPGAMLMRVAES 176
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1035_RHOS1 (UPF0061 protein Rsph17029_1035 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=Rsph17029_1035 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.880e-30 Identity = 79/163 (48.47%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 P+A V P+L+ + +A+ L LDP ER +F SG GA P AQ Y GHQFG ++ QLGDGRA+ +GEI + R +LQLKG+G+TP+SR ADG A L +RE+L EAMH LGIPTTRAL TG+ P + G E PGA + R+A S Sbjct: 21 PAAPVPAPRLLRLNRPLAEELGLDPDLLEREGAEIF-SGRRLPEGAHPLAQAYAGHQFGGFSPQLGDGRALLIGEITDRAGRRRDLQLKGSGRTPFSRGADGKAALGPVLREYLVGEAMHGLGIPTTRALAAVATGE---PLLRQEG---ERPGAILTRVAAS 176
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y5402_METPB (UPF0061 protein Mpop_5402 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=Mpop_5402 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 5.067e-30 Identity = 78/168 (46.43%), Postives = 100/168 (59.52%), Query Frame = 1 Query: 355 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 + +V+P+A VE P+LV + ++A L LDP E P+ SG GA P A Y GHQFG + QLGDGRAI LGE++ R ++QLKG+G TP+SR DG A L +RE+L SEAMH LGIPTTRAL TTG+ + PGA + R+A S Sbjct: 19 FARVAPTA-VEAPRLVRLNRTLALDLGLDPDRLESPEGLDVLSGRRVAEGAEPLAAAYAGHQFGQFVPQLGDGRAILLGEVVGRDGRRRDIQLKGSGPTPFSRRGDGRAALGPVLREYLVSEAMHALGIPTTRALAAVTTGEPVIRETVL-------PGAVLTRVASS 178
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECOL5 (UPF0061 protein ydiU OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.129e-29 Identity = 81/175 (46.29%), Postives = 103/175 (58.86%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P E GA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNSAG--VWGGENLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETVESGAMLMRVAPS 174 The following BLAST results are available for this feature:
BLAST of DY260576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260576 ID=DY260576; Name=DY260576; organism=Citrus clementina; type=EST; length=1241bpback to top |