DY260576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: SELO_HUMAN (Selenoprotein O OS=Homo sapiens GN=SELO PE=2 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 3.615e-44 Identity = 106/208 (50.96%), Postives = 125/208 (60.10%), Query Frame = 1 Query: 262 LEDLNWDHSFVRELP------GDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD--PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 L L +D+ +R LP G S PR V AC+T+V P+ + P+LVA SE L L P + LFFSG L GA P A CY GHQFG +AGQLGDG A+ LGE+ ERWELQLKGAG TP+SR ADG VLRSSIREFLCSEAM LG+PTTRA T+ D+FY+GNPK E V R+A +F Sbjct: 45 LAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVPGACFTRVQPTP-LRQPRLVALSEPALALLGLGAPPAREAEAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGPTPFSRQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDVFYDGNPKYEQCTVVLRVASTF 251
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: SELO_DANRE (Selenoprotein O OS=Danio rerio GN=selo PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 5.220e-43 Identity = 102/225 (45.33%), Postives = 141/225 (62.67%), Query Frame = 1 Query: 223 GGDESKMTKNLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE-FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSE-----------RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 G D+ ++ + +LE L +D+ +++LP DP T+ R+V +C+++V P+ ++NP+ VA S L LD +E + P P + SG+ + G+ P A CY GHQFG +AGQLGDG A LGE+ + RWE+Q+KGAG TPYSR ADG VLRSSIREFLCSEA+ LG+PTTRA + T+ D+FY+GNP+ E + V RIAPSF Sbjct: 28 GMDDMGVSLSRSSLERLEFDNVALKKLPLDPSTEPGVRQVRGSCFSRVQPTP-LKNPEFVAVSAPALALLGLDAEEVLKDPLGPEYLSGSKVMPGSEPAAHCYCGHQFGQFAGQLGDGAACYLGEVKAPAGQSPELLRENPTGRWEIQVKGAGLTPYSRQADGRKVLRSSIREFLCSEAVFALGVPTTRAGSVVTSDSRVMRDIFYDGNPRMERCSVVLRIAPSF 251
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1944_BURCJ (UPF0061 protein BceJ2315_19440 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=BceJ2315_19440 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 5.590e-37 Identity = 79/133 (59.40%), Postives = 94/133 (70.68%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 759 P+A + P +V +S+ VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL Sbjct: 41 PAAPLAAPYVVGFSDEVAQLLDLPPTLAAQPGFAELFTGNPTRDWPANAMPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRAL 173
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y6171_BURCA (UPF0061 protein Bcen_6171 OS=Burkholderia cenocepacia (strain AU 1054) GN=Bcen_6171 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.300e-37 Identity = 79/133 (59.40%), Postives = 94/133 (70.68%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 759 P+A + P +V +S+ VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL Sbjct: 41 PAAPLAAPYVVGFSDDVAQLLDLPPSIAAQPGFAELFAGNPTRDWPAHAMPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRAL 173
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1908_BURCH (UPF0061 protein Bcen2424_1908 OS=Burkholderia cenocepacia (strain HI2424) GN=Bcen2424_1908 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.300e-37 Identity = 79/133 (59.40%), Postives = 94/133 (70.68%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 759 P+A + P +V +S+ VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL Sbjct: 41 PAAPLAAPYVVGFSDDVAQLLDLPPSIAAQPGFAELFAGNPTRDWPAHAMPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRAL 173
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y486_PSEF5 (UPF0061 protein PFL_0486 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_0486 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.534e-37 Identity = 96/202 (47.52%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +KAL++L +D+ F R GD A T V P ++NP+LVA S L+LDP E P F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIP++RALC+ G+ + K+E GA V R+APS Sbjct: 1 MKALDELTFDNRFARL--GD------------AFSTHVLPEP-LDNPRLVAASPGAMALLDLDPAVAETPVFAELFGGHKLWAEAEPRAMVYSGHQFGSYNPQLGDGRGLLLGEVYNQAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRALCV-----IGSDTPVW--REKQERGAMVLRLAPS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1931_BURCC (UPF0061 protein Bcenmc03_1931 OS=Burkholderia cenocepacia (strain MC0-3) GN=Bcenmc03_1931 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.534e-37 Identity = 79/133 (59.40%), Postives = 94/133 (70.68%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 759 P+A + P +V +S+ VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL Sbjct: 41 PAAPLAAPYVVGFSDDVAQLLDLPPAIAAQPGFAELFAGNPTRDWPAHAMPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRAL 173
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1924_BURPP (UPF0061 protein Bphyt_1924 OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=Bphyt_1924 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.626e-36 Identity = 90/167 (53.89%), Postives = 106/167 (63.47%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 P+A + P LV +S A L L+P P F FSG A A+PYA Y GHQFG+WAGQLGDGRA+ LGE+ + +R+ELQLKGAG+TPYSR DG AVLRSSIRE+LCSEAMH LGIPTTRALC+ G+ E A V R+APSF Sbjct: 41 PAAPLSAPYLVGFSAETAALLGLEPGLENDPGFAELFSGNLTREWPAEALPYASVYSGHQFGVWAGQLGDGRALGLGEVEH-NGQRFELQLKGAGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALCV-----IGSDQPV--RRETVETAAVVTRVAPSF 199
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y5209_BURS3 (UPF0061 protein Bcep18194_A5209 OS=Burkholderia sp. (strain 383) GN=Bcep18194_A5209 PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 2.124e-36 Identity = 79/133 (59.40%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 759 P+A + P +V +S VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE R+ELQLKG+G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL Sbjct: 41 PAAPLAAPYVVGFSGEVAQLLDLPPSIAAQPGFAELFAGNPTRDWPANAMPYASVYSGHQFGVWAGQLGDGRALTIGERTGTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRAL 173
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y3881_PSEU5 (UPF0061 protein PST_3881 OS=Pseudomonas stutzeri (strain A1501) GN=PST_3881 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.774e-36 Identity = 95/202 (47.03%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +K L L++D+ F R GD + T+VSP +E P+LV SE+ L+LDP E E+ F FSG + A P A Y GHQFG + QLGDGR + LGE++N E W+L LKGAGKTPYSR DG AVLRSSIREFL SE +H LGIP++RALC+ G+ + Y P E GA + R+APS Sbjct: 1 MKTLTQLHFDNRFARL--GDTFS------------TQVSPQP-LEAPRLVVASEAAMALLDLDPAEAEQALFAELFSGHKIWSTAEPRAMVYSGHQFGSYNPQLGDGRGLLLGEVVNEAGEYWDLHLKGAGKTPYSRMGDGRAVLRSSIREFLASEHLHALGIPSSRALCV-----TGSDTLVYRERP--ERGAMLLRLAPS 180 The following BLAST results are available for this feature:
BLAST of DY260576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260576 ID=DY260576; Name=DY260576; organism=Citrus clementina; type=EST; length=1241bpback to top |