DY260576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1826_BURA4 (UPF0061 protein BamMC406_1826 OS=Burkholderia ambifaria (strain MC40-6) GN=BamMC406_1826 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.067e-35 Identity = 77/133 (57.89%), Postives = 92/133 (69.17%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 759 P+A + P +V +S+ VA L L +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQ+KG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL Sbjct: 41 PAAPLPAPYVVGFSDEVAQLLGLPASFAAQPGFAELFAGNPTRDWPAHALPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQIKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRAL 173
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1440_BURMA (UPF0061 protein BMA1440 OS=Burkholderia mallei GN=BMA1440 PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 4.006e-35 Identity = 79/144 (54.86%), Postives = 97/144 (67.36%), Query Frame = 1 Query: 343 LHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCL 765 L A + P+A + P +V +S+ A L L+P + P F F G ++PYA Y GHQFG+WAGQLGDGRA+T+GE+ + R+ELQLKGAG+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL + Sbjct: 32 LGAAFVTRLPAAPLPAPYVVGFSDDAARMLGLEPALRDAPGFAELFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELAH-DGRRYELQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALAV 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y4038_DECAR (UPF0061 protein Daro_4038 OS=Dechloromonas aromatica (strain RCB) GN=Daro_4038 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 6.833e-35 Identity = 89/172 (51.74%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 349 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC-LGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 A YT++ P E P +V S VAD L L + P F F+G L G+ P A Y GHQFG+WAGQLGDGRA LG + N + WE+QLKGAG+TPYSR ADG AVLRSSIREFLCSEAM LG+PTTRALC +G ++ E A V R+AP F Sbjct: 24 AFYTRLEPHPLPE-PYVVGVSTEVADLLGLPAELMNSPQFAEIFAGNRLLPGSEPLAAVYSGHQFGVWAGQLGDGRAHLLGGLRNDQGH-WEIQLKGAGRTPYSRGADGRAVLRSSIREFLCSEAMAGLGVPTTRALCVIGADQPVRREEI--------ETAALVARVAPGF 185
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y2935_VARPS (UPF0061 protein Vapar_2935 OS=Variovorax paradoxus (strain S110) GN=Vapar_2935 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 6.833e-35 Identity = 91/172 (52.91%), Postives = 110/172 (63.95%), Query Frame = 1 Query: 349 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLF-FSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 A T++ P+ + P V SE+ A L L P ++ + + L +G P+AG +P+A Y GHQFG+WAGQLGDGRAI LGE E+QLKGAG+TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRALC+ G+ Y P E A V R+APSF Sbjct: 27 AFLTELRPTPLPDPPYWVGHSEAAARLLGL-PADWRQSEGTLAALTGNLPVAGTLPFATVYSGHQFGVWAGQLGDGRAIMLGET----EGGLEVQLKGAGRTPYSRGADGRAVLRSSIREFLCSEAMHGLGIPTTRALCV-----TGSDARVYREMP--ETAAVVTRVAPSF 186
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1896_BURCM (UPF0061 protein Bamb_1896 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=Bamb_1896 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 6.833e-35 Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 759 P+A + P +V S+ VA L L +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQ+KG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL Sbjct: 41 PAAPLPAPYVVGCSDEVAQLLGLPASFATQPGFAELFAGNPTRDWPAHALPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQIKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRAL 173
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y2107_BORBR (UPF0061 protein BB2107 OS=Bordetella bronchiseptica GN=BB2107 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.165e-34 Identity = 92/190 (48.42%), Postives = 111/190 (58.42%), Query Frame = 1 Query: 292 VRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 +++LP D ++P E YT++ P P+L+ + A + LDP EF F FSG PL G A Y GHQFG+WAGQLGDGRA LGE+ + WELQLKGAG TPYSR DG AVLRSS+RE+L SEAMH LGIPTTR+L L + P M E A V R+APSF Sbjct: 6 LQDLPTDNSFAALPAEF----YTRLQPRPPAA-PRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGDGRAHLLGEVRG-PAGGWELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSLALVVS---DDPVM----RETVETAAVVTRMAPSF 182
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1919_BORPA (UPF0061 protein BPP1919 OS=Bordetella parapertussis GN=BPP1919 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.165e-34 Identity = 92/190 (48.42%), Postives = 111/190 (58.42%), Query Frame = 1 Query: 292 VRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 +++LP D ++P E YT++ P P+L+ + A + LDP EF F FSG PL G A Y GHQFG+WAGQLGDGRA LGE+ + WELQLKGAG TPYSR DG AVLRSS+RE+L SEAMH LGIPTTR+L L + P M E A V R+APSF Sbjct: 6 LQDLPTDNSFAALPAEF----YTRLQPRPPAA-PRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGDGRAHLLGEVRG-PAGGWELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSLALVVS---DDPVM----RETVETAAVVTRMAPSF 182
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1840_BURVG (UPF0061 protein Bcep1808_1840 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=Bcep1808_1840 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.165e-34 Identity = 77/133 (57.89%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 370 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 759 P+A + P +V +S VA L L P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIRE+LCSEAMH LGIPTTRAL Sbjct: 41 PAAPLPAPYVVGFSAEVAQLLGLPPSLAAHAQFAELFAGNPTRDWPAHALPYASVYSGHQFGVWAGQLGDGRALTIGELPGSDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRAL 173
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y4511_AZOVD (UPF0061 protein Avin_45110 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_45110 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.988e-34 Identity = 90/202 (44.55%), Postives = 116/202 (57.43%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +K L +L +D+ F R GD + T V+P + +P+LV S + L+L+P + P + +G P GA P A Y GHQFG + QLGDGR + LGE++N ERW+L LKGAGKTPYSR DG AVLRSSIREFL SE +H LGIPT+RALC+ + TP EE A + R+APS Sbjct: 1 MKRLSELAFDNRFARL--GDTFS------------TAVTP-LPIASPRLVVASPAALALLDLEPAVADDPQLVEYCAGQCPWPGAEPRAMAYSGHQFGFYNPQLGDGRGLLLGEVINAAGERWDLHLKGAGKTPYSRMGDGRAVLRSSIREFLASEHLHALGIPTSRALCVTAS---DTPVW----RETEERAATLLRLAPS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y5118_PSEPG (UPF0061 protein PputGB1_5118 OS=Pseudomonas putida (strain GB-1) GN=PputGB1_5118 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.391e-34 Identity = 87/171 (50.88%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCL 765 +KAL+ L++D+ F R GD A T+V P E P+LV SES L+LDP E P F FSG A P A Y GHQFG + +LGDGR + L E+LN E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIPT+RALC+ Sbjct: 1 MKALDQLSFDNRFARL--GD------------AFSTQVLPEPIAE-PRLVVASESAMALLDLDPAHAELPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVLNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIPTSRALCV 156 The following BLAST results are available for this feature:
BLAST of DY260576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260576 ID=DY260576; Name=DY260576; organism=Citrus clementina; type=EST; length=1241bpback to top |