DY260576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y444_PSEFS (UPF0061 protein PFLU_0444 OS=Pseudomonas fluorescens (strain SBW25) GN=PFLU_0444 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.391e-34 Identity = 92/202 (45.54%), Postives = 114/202 (56.44%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +KAL++L +D+ F R GD + + E L A P+LV S + L+LDP E P F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LKGAG TPYSR DG AVLRSSIREFL SEA+H LGIP++RALC+ G+ + K+E GA V R+A S Sbjct: 1 MKALDELTFDNRFARL--GDAFSTHVLPEPLDA-------------PRLVVASPAAMALLDLDPSVAETPVFAELFGGHKLWAEAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNEAGEHWDLHLKGAGMTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRALCV-----IGSDTPVW--REKQERGAMVLRMAHS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y5028_PSESM (UPF0061 protein PSPTO_5028 OS=Pseudomonas syringae pv. tomato GN=PSPTO_5028 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.554e-34 Identity = 93/202 (46.04%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +KAL++L +D+ F R GD A T V P ++ P+LV SES L+L P++ E P F FSG A A P A Y GHQFG + +LGDGR + LGE+ N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIP++RA C+ ++ TP K+E A V R+A S Sbjct: 1 MKALDELVFDNRFARL--GD------------AFSTHVLPEP-IDAPRLVVASESALALLDLAPEQSELPLFAEIFSGHKLWAEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVYNDAGEHWDLHLKGAGRTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRAACVVSS---NTPVW----REKQEYAAMVLRLAQS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y5068_PSEPK (UPF0061 protein PP_5068 OS=Pseudomonas putida (strain KT2440) GN=PP_5068 PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.683e-33 Identity = 85/171 (49.71%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCL 765 +KAL+ L +D+ F R GD A T+V P + +P+LV SES L+LDP + E P F FSG A P A Y GHQFG + +LGDGR + L E+LN E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGI T+RALC+ Sbjct: 1 MKALDQLTFDNRFARL--GD------------AFSTQVLPEP-IADPRLVVASESAMALLDLDPAQAELPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVLNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIATSRALCV 156
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y4941_PSEP1 (UPF0061 protein Pput_4941 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_4941 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.198e-33 Identity = 85/171 (49.71%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCL 765 +KAL+ L +D+ F R GD A T+V P + +P+LV SES L+LDP + E P F FSG A P A Y GHQFG + +LGDGR + L E+LN E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGI T+RALC+ Sbjct: 1 MKALDQLTFDNRFARL--GD------------AFSTQVLPEP-IADPRLVVASESAMALLDLDPAQAELPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVLNDVGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIATSRALCV 156
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y444_PSEPF (UPF0061 protein Pfl01_0444 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_0444 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.871e-33 Identity = 86/202 (42.57%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +KAL++L +D+ F R D+ VL ++NP+LV S + L+LDP + +F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LKGAG+TP+SR DG AVLRSSIREFL SEA+H L IP++RA C+ G+ + K+E A V R+APS Sbjct: 1 MKALDELTFDNRFAR------LGDAFSAHVL---------PEPIDNPRLVVASPAALALLDLDPAMADTQEFAELFGGHKLWADAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNAAGEHWDLHLKGAGQTPFSRMGDGRAVLRSSIREFLASEALHALNIPSSRAACV-----IGSDTPVW--REKQERAAMVLRLAPS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y398_PSEPW (UPF0061 protein PputW619_0398 OS=Pseudomonas putida (strain W619) GN=PputW619_0398 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.871e-33 Identity = 83/171 (48.54%), Postives = 105/171 (61.40%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCL 765 +KAL+ L +D+ F R GD A T+V P + +P+LV S+S L+LDP + + P F FSG GA P A Y GHQFG + +LGDGR + L E++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGI T+RALC+ Sbjct: 1 MKALDQLTFDNRFARL--GD------------AFSTQVLPEP-IADPRLVIASKSAMALLDLDPAQADTPVFAELFSGHKLWEGADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVVNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIATSRALCV 156
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y2581_POLSJ (UPF0061 protein Bpro_2581 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=Bpro_2581 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.897e-33 Identity = 91/198 (45.96%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 271 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCL-GTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 L W +SF R PG YT++ P+ + +P V S+++A L L+ E + +G AG+ P A Y GHQFG+WAGQLGDGRAI LG+ L + E+QLKGAG+TPYSR DG AVLRSSIREFL SEAMH LGIPTTRALC+ G+ D+ E A V R +PSF Sbjct: 19 LKWGNSFARLGPG--------------FYTELQPTP-LPSPYWVGRSQALARELGLEDHWLESAEALEVLTGNRSTAGSRPLASVYSGHQFGVWAGQLGDGRAILLGD-LQTPAGPQEIQLKGAGRTPYSRMGDGRAVLRSSIREFLASEAMHGLGIPTTRALCVTGSDAPVRREDI--------ETAAVVTRTSPSF 192
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y369_PSEE4 (UPF0061 protein PSEEN0369 OS=Pseudomonas entomophila (strain L48) GN=PSEEN0369 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.395e-33 Identity = 82/171 (47.95%), Postives = 106/171 (61.99%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCL 765 +K+L+ L +D+ F R GD A T+V P + +P+LV SE+ L+LDP + + P F FSG A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIP++RALC+ Sbjct: 1 MKSLDQLVFDNRFARL--GD------------AFSTQVLPDP-IADPRLVVASEAAMALLDLDPAQADLPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLGEVVNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRALCV 156
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y863_MYXXD (UPF0061 protein MXAN_0863 OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_0863 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 8.352e-33 Identity = 85/202 (42.08%), Postives = 115/202 (56.93%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 + LE L +D+++ R LP +V PS + +LV+ + + L+L P+E +RP+F GA PL G P+A Y GHQFG++ +LGDGRA+ LGE+ + +W+L LKG G TP+SR DG AVLRS+IRE+LC EAMH LGIPTTR L G G+ Y E GA + R+APS Sbjct: 1 MATLEQLRFDNTYAR-LPA-------------GFGARVHPSP-FPDAKLVSVNPAALKLLDLTPEEAQRPEFVAAMGGAKPLPGMEPFAMVYAGHQFGVYVPRLGDGRALLLGEVRDAAGAKWDLHLKGGGPTPFSRGGDGRAVLRSTIREYLCGEAMHGLGIPTTRGL-----GILGSQAPVY--REAVETGAMLVRMAPS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1192_THISH (UPF0061 protein Tgr7_1192 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=Tgr7_1192 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.425e-32 Identity = 88/199 (44.22%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 262 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 LEDL + +S+ R LP A + + P A P VA++E A + L P+E R +F F+G PL G P + Y GHQFG++ QLGDGRA+ LGE+ + RWELQLKG+G T +SR ADG AVLRS+IRE+L SEAMH LG+PTTRAL + G+ Y + E A + R+APS Sbjct: 4 LEDLKFINSYAR-LP-------------EAFHDRPMP-APFPQPYRVAFNEKAAALIGLHPEEASRAEFVNAFTGQIPLTGMEPVSMIYAGHQFGVYVPQLGDGRALVLGEVQTPEGARWELQLKGSGPTRFSRGADGRAVLRSTIREYLASEAMHALGVPTTRALTI-----LGSDMPVY--RERVETAAILVRMAPS 180 The following BLAST results are available for this feature:
BLAST of DY260576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260576 ID=DY260576; Name=DY260576; organism=Citrus clementina; type=EST; length=1241bpback to top |