DY260576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_SALSV (UPF0061 protein ydiU OS=Salmonella schwarzengrund (strain CVM19633) GN=ydiU PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.509e-31 Identity = 81/175 (46.29%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + + TP +E GA + R+A S Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVAS---DTPVQ----RETQETGAMLMRLAQS 176
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_SALPC (UPF0061 protein ydiU OS=Salmonella paratyphi C (strain RKS4594) GN=ydiU PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.509e-31 Identity = 81/175 (46.29%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + + TP +E GA + R+A S Sbjct: 10 RDELPATYTALLPTL-LKNARLIWYNDKLAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVAS---DTPVQ----RETQETGAMLMRLAQS 176
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECO5E (UPF0061 protein ydiU OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.583e-31 Identity = 83/175 (47.43%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETVEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECO57 (UPF0061 protein ydiU OS=Escherichia coli O157:H7 GN=ydiU PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.583e-31 Identity = 83/175 (47.43%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETVEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECOSE (UPF0061 protein ydiU OS=Escherichia coli (strain SE11) GN=ydiU PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.986e-31 Identity = 83/175 (47.43%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNAAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETVEPGAMLIRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y5413_PSEA8 (UPF0061 protein PLES_54131 OS=Pseudomonas aeruginosa (strain LESB58) GN=PLES_54131 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.986e-31 Identity = 88/203 (43.35%), Postives = 118/203 (58.13%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC-LGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +K+L+DL++D+ F R L G T+ +P P AE P+LV S + L+L + + F F G + A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+ LGIP++RALC +G++ TP K+E A + R+APS Sbjct: 1 MKSLDDLDFDNRFAR-LGGAFSTEVLP-----------DPIAE---PRLVVASPAALALLDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVINQAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALPALGIPSSRALCVIGSS----TPVW----REKKESAATLLRLAPS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y5023_PSEAE (UPF0061 protein PA5023 OS=Pseudomonas aeruginosa GN=PA5023 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.986e-31 Identity = 88/203 (43.35%), Postives = 118/203 (58.13%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC-LGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +K+L+DL++D+ F R L G T+ +P P AE P+LV S + L+L + + F F G + A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+ LGIP++RALC +G++ TP K+E A + R+APS Sbjct: 1 MKSLDDLDFDNRFAR-LGGAFSTEVLP-----------DPIAE---PRLVVASPAALALLDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVINQAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALPALGIPSSRALCVIGSS----TPVW----REKKESAATLLRLAPS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y2105_ENTS8 (UPF0061 protein ESA_02105 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ESA_02105 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.986e-31 Identity = 85/182 (46.70%), Postives = 107/182 (58.79%), Query Frame = 1 Query: 313 PRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 PR + R+ L YT+++P+ + N +L+ + +A +LEL F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE + + LKGAG TPYSR DG AVLRS++REFL SEAMH LGIPTTRAL + T+ TP E GA + RIA S Sbjct: 5 PRFIATWRDELPGFYTELTPTP-LNNSRLLCHNAPLAQALELPETLFDYQGPAGVWGGETLLPGMAPLAQVYSGHQFGVWAGQLGDGRGILLGEQQLSDGCKLDWHLKGAGLTPYSRMGDGRAVLRSTVREFLASEAMHGLGIPTTRALTIVTS---DTPVR----RETTERGAMLMRIAES 178
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_SHIB3 (UPF0061 protein ydiU OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ydiU PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.021e-30 Identity = 83/175 (47.43%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +LV + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLVWHNTELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETAEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECOLU (UPF0061 protein ydiU OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.021e-30 Identity = 83/175 (47.43%), Postives = 106/175 (60.57%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + P + D ++ G T L G P AQ Y GHQFG+WAGQLGDGR I LGE + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPGTYTALSPTP-LNNARLIWHNTELANTLSI-PSSLFKNDAGVW-GGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQRLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETVEPGAMLMRVAPS 174 The following BLAST results are available for this feature:
BLAST of DY260576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260576 ID=DY260576; Name=DY260576; organism=Citrus clementina; type=EST; length=1241bpback to top |