DY260576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y1090_BORPE (UPF0061 protein BP1090 OS=Bordetella pertussis GN=BP1090 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.021e-30 Identity = 87/190 (45.79%), Postives = 105/190 (55.26%), Query Frame = 1 Query: 292 VRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPSF 861 +++LP D ++P E YT++ P P+L+ + A + LDP EF F FSG PL G A Y GHQFG+WAGQLG+ R G WELQLKGAG TPYSR DG AVLRSS+RE+L SEAMH LGIPTTR+L L + P M E A V R+APSF Sbjct: 6 LQDLPTDNSFAALPAEF----YTRLQPRPPAA-PRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGEVRGPAGG---------WELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSLALVVS---DDPVM----RETVETAAVVTRMAPSF 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_SHISS (UPF0061 protein ydiU OS=Shigella sonnei (strain Ss046) GN=ydiU PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.333e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETAEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECOLI (UPF0061 protein ydiU OS=Escherichia coli (strain K12) GN=ydiU PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.333e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETAEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECOLC (UPF0061 protein ydiU OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ydiU PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.333e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETAEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECOHS (UPF0061 protein ydiU OS=Escherichia coli O9:H4 (strain HS) GN=ydiU PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.333e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETAEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECODH (UPF0061 protein ydiU OS=Escherichia coli (strain K12 / DH10B) GN=ydiU PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.333e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETAEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_ECOBW (UPF0061 protein ydiU OS=Escherichia coli (strain K12 / BW2952) GN=ydiU PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.333e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETAEPGAMLMRVAPS 174
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y6641_PSEAB (UPF0061 protein PA14_66410 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=PA14_66410 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.333e-30 Identity = 88/203 (43.35%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 253 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC-LGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 +K+L+DL++D+ F R D+ EVL P AE P+LV S + L+L + + F F G + A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+ LGIP++RALC +G++ TP K+E A + R+APS Sbjct: 1 MKSLDDLDFDNRFAR------LGDAFSTEVLP------DPIAE---PRLVVASPAALALLDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVINQAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALPALGIPSSRALCVIGSS----TPVW----REKKESAATLLRLAPS 180
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: Y185_AERS4 (UPF0061 protein ASA_0185 OS=Aeromonas salmonicida (strain A449) GN=ASA_0185 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.742e-30 Identity = 73/122 (59.84%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 493 PLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 PL G P AQ Y GHQFG ++ +LGDGRA+ LGE L +RW+L LKGAGKTP+SRF DG AVLRSSIRE+L SEA+H LGIPTTRAL L G+ + Y +EE GA V R APS Sbjct: 58 PLPGMQPVAQVYAGHQFGGYSPRLGDGRALLLGEQLATDGQRWDLHLKGAGKTPFSRFGDGRAVLRSSIREYLASEALHALGIPTTRALVL-----VGSKEPVY--REQEETGATVLRTAPS 172
BLAST of DY260576 vs. ExPASy Swiss-Prot
Match: YDIU_SHIBS (UPF0061 protein ydiU OS=Shigella boydii serotype 4 (strain Sb227) GN=ydiU PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.275e-30 Identity = 82/175 (46.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 334 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLGTTGKFGTPDMFYNGNPKEEPGAFVWRIAPS 858 R+ L YT +SP+ + N +L+ + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL + T+ +P EPGA + R+APS Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNIELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTS---DSPVY----RETAEPGAMLMRVAPS 174 The following BLAST results are available for this feature:
BLAST of DY260576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260576 ID=DY260576; Name=DY260576; organism=Citrus clementina; type=EST; length=1241bpback to top |