DY260645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.391e-18 Identity = 44/74 (59.46%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 93 HANGG--GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWC 308 H GG G WINA ATFY YGNLYSQGYG TAALSTALF+ GLSCG+C+E+ CVND +WC Sbjct: 29 HHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWC 102
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.078e-18 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 3 Query: 102 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC 287 GGGGW +A ATFY YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C Sbjct: 60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 121
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.643e-17 Identity = 42/70 (60.00%), Postives = 46/70 (65.71%), Query Frame = 3 Query: 96 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKW 305 A GGG W +A ATFY YGNLYSQGYG N AALSTALFN+G SCG+C+EIKCVN W Sbjct: 30 AYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGW 99
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 3.452e-17 Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 3 Query: 108 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWC 308 G W +A ATFY YGNLYS GYGTNTAALST LFN+G +CGSCYE++C ND +WC Sbjct: 27 GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWC 93
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.889e-17 Identity = 42/71 (59.15%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 96 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWC 308 A G GGW +A ATFY YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N C Sbjct: 18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSC 88
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.889e-17 Identity = 42/71 (59.15%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 96 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWC 308 A G GGW +A ATFY YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N C Sbjct: 18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSC 88
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.238e-16 Identity = 40/67 (59.70%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 102 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHK 302 G G W ATFY YGNLYSQGYGT+TAALSTALFN GLSCGSCYE++C DH+ Sbjct: 24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHR 90
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 8.504e-16 Identity = 40/77 (51.95%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWCFFFFSKDTPTLF 344 W +ARATFY YG+L+ QGYG TAALSTALFN G +CG+CY+I CVND +WC K T T F Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNF 124
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.474e-15 Identity = 40/77 (51.95%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWCFFFFSKDTPTLF 344 W +ARATFY YGNL+ QGYG TAALSTALFN+G +CG+CYEI C D +WC K T T F Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNF 134
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.474e-15 Identity = 40/77 (51.95%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWCFFFFSKDTPTLF 344 W +ARATFY YGNL+ QGYG TAALSTALFN+G +CG+CYEI C D +WC K T T F Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNF 128 The following BLAST results are available for this feature:
BLAST of DY260645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260645 ID=DY260645; Name=DY260645; organism=Citrus clementina; type=EST; length=964bpback to top |