DY260645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.231e-15 Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWCFFFFSKDTPTLF 344 W +ARATFY YG+L+ QGYG TAALSTALFN G +CG+CY+I CV+D +WC K T T F Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNF 131
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 93 HANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWC 308 +++ GGW ATFY YGNL+SQGYG TAALSTALFN+G CG+C+E++C +D +WC Sbjct: 25 NSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWC 96
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 5.512e-15 Identity = 37/68 (54.41%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 111 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDHKWC 308 GW+ A ATFY YGNLY+QGYGT TAALSTALFN+GL+CG CY++ C D WC Sbjct: 33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWC 100
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.604e-14 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 96 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC 287 A G GW + ATFY YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C Sbjct: 21 AGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRC 84
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.666e-14 Identity = 39/78 (50.00%), Postives = 45/78 (57.69%), Query Frame = 3 Query: 111 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWCFFFFSKDTPTLF 344 GW + RATFY YG+L+ QGYG TAALSTALFNNG CG+CYEI C + +WC K T T F Sbjct: 89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNF 166
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.024e-13 Identity = 36/68 (52.94%), Postives = 41/68 (60.29%), Query Frame = 3 Query: 111 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDHKWC 308 GW+ A ATFY YGNLY+ GY TNTAALSTALFN+G SCG CY+I C +WC Sbjct: 27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWC 94
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.950e-13 Identity = 37/70 (52.86%), Postives = 42/70 (60.00%), Query Frame = 3 Query: 111 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDH----KWC 308 GW + ATFY YGNLY GYGTNTAALS+ALFN+G SCG CY+I C DH +WC Sbjct: 31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIAC--DHQAEPRWC 98
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.800e-13 Identity = 36/73 (49.32%), Postives = 41/73 (56.16%), Query Frame = 3 Query: 96 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDHKWC 308 A GW ATFY YGNLY+QGYGT TAALSTALF++G SCG CY + C D +WC Sbjct: 28 AFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWC 100
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.800e-13 Identity = 36/73 (49.32%), Postives = 40/73 (54.79%), Query Frame = 3 Query: 96 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDHKWC 308 A GGW++ ATFY YGNLY+QGYG AALSTALFN G SCG CY I C +WC Sbjct: 21 AAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWC 93
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.800e-13 Identity = 36/67 (53.73%), Postives = 39/67 (58.21%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDH--KWC 308 W A ATFY YGNLYSQGYGT AALSTALFN+G SCG CY+I C +WC Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWC 105 The following BLAST results are available for this feature:
BLAST of DY260645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260645 ID=DY260645; Name=DY260645; organism=Citrus clementina; type=EST; length=964bpback to top |