DY260645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.800e-13 Identity = 35/67 (52.24%), Postives = 40/67 (59.70%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDH--KWC 308 W+ A ATFY YG+LYSQGYGT AALSTALFN+G SCG CY+I C +WC Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWC 118
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.960e-12 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 117 INARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDHKWC 308 ++ ATFY YGNLYS GYGTNTAALS+ALFN+G +CG CY+I C ++ KWC Sbjct: 25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWC 89
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.560e-12 Identity = 36/68 (52.94%), Postives = 39/68 (57.35%), Query Frame = 3 Query: 111 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDHKWC 308 G N ATFY YG+LYS GYGT TAALSTALFN+G SCG CY I C D +WC Sbjct: 25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWC 92
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.344e-12 Identity = 36/68 (52.94%), Postives = 40/68 (58.82%), Query Frame = 3 Query: 111 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDHKWC 308 GW A ATFY YG+LYS GYGTNTAALST LFN+G SCG CY I C D ++C Sbjct: 33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFC 100
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.344e-12 Identity = 35/67 (52.24%), Postives = 39/67 (58.21%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDH--KWC 308 W A ATFY YG+LYSQGYGT AALSTALFN+G SCG CY+I C +WC Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWC 100
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.704e-12 Identity = 35/67 (52.24%), Postives = 38/67 (56.72%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDH--KWC 308 WI A ATFY YGNLY QGYG AALSTALFN+G +CG CY I C D +WC Sbjct: 27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWC 93
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.704e-12 Identity = 34/62 (54.84%), Postives = 35/62 (56.45%), Query Frame = 3 Query: 111 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND 296 GW+ ATFY YGNLY QGYG N AALST LFNNG SCG CY I C D Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYD 83
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.450e-12 Identity = 31/64 (48.44%), Postives = 39/64 (60.94%), Query Frame = 3 Query: 96 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC 287 A G W +A ATFY YGN Y QGYGT+TAALS +F +GLSCG+C+E++C Sbjct: 24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRC 87
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.729e-12 Identity = 34/67 (50.75%), Postives = 39/67 (58.21%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDH--KWC 308 W+ A ATFY Y +LYSQGYGT AALSTALFN+G SCG CY+I C +WC Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWC 116
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.660e-11 Identity = 34/68 (50.00%), Postives = 38/68 (55.88%), Query Frame = 3 Query: 111 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDHKWC 308 GW ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C +WC Sbjct: 26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWC 93 The following BLAST results are available for this feature:
BLAST of DY260645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260645 ID=DY260645; Name=DY260645; organism=Citrus clementina; type=EST; length=964bpback to top |