DY260645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.831e-11 Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDHKWC 308 W +A ATFY YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C + +WC Sbjct: 27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWC 92
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.697e-11 Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCV 290 W A ATFY YGNLY+ GYGT+TAALST LF +G CG+CY+++CV Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCV 95
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.236e-11 Identity = 33/66 (50.00%), Postives = 37/66 (56.06%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDHKWC 308 W A ATFY YG+LY GYGT TAALSTALFN G SCG+C+ I C +WC Sbjct: 25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWC 90
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.236e-11 Identity = 32/66 (48.48%), Postives = 37/66 (56.06%), Query Frame = 3 Query: 114 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDHKWC 308 W A ATFY YGNLY+ GYG N AALS+ALFN+G CG+CY I C + WC Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWC 88
BLAST of DY260645 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.236e-11 Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 105 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDHKWCFF 314 G W A ATFY YGN+Y GYG T ALSTALFN G +CG C+++KCV+ C++ Sbjct: 28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYY 96 The following BLAST results are available for this feature:
BLAST of DY260645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260645 ID=DY260645; Name=DY260645; organism=Citrus clementina; type=EST; length=964bpback to top |