DY260652

Overview
NameDY260652
Unique NameDY260652
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.928e-39
Identity = 76/177 (42.94%), Postives = 115/177 (64.97%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNY 530
            LIG + +G  FTKE+++ MA+FN++P+I ALSNPTS++ECTAE+ Y +++GR IFASGSPFDP    NGK   PGQ NN+Y+FPG  LG++  G   + +D+ L  +E +A+QV+EEN ++G +YPP   I+              Y    A+  P+P++L    +S +Y+  Y ++
Sbjct:  365 LIGVAAIGGAFTKEILQDMAAFNKRPIIFALSNPTSKAECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFPGVALGVIACGLKHIGEDVFLTTAEVIAEQVSEENLQEGRLYPPLVTIQHVSLKIAVRIAEEAYRNNTASTYPQPKDLEAFIQSQIYSTDYNSF 541          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.632e-38
Identity = 77/174 (44.25%), Postives = 114/174 (65.52%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVY 521
            LIG + +G  FT+++++ MA+FNE+P+I ALSNPTS++EC+AEE Y  +KGRAIFASGSPFDP    +G+   PGQ NN+Y+FPG  LG+V  G   ++D + L  +E +++QV++++ E+G +YPP + IR              Y+  +AT  P PQN  +   S MY+  Y
Sbjct:  376 LIGVAAIGGAFTEQILKDMAAFNERPIIFALSNPTSKAECSAEECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHINDSVFLTTAEVISQQVSDKHLEEGRLYPPLNTIRDVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNY 549          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.635e-38
Identity = 77/174 (44.25%), Postives = 113/174 (64.94%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVY 521
            LIG + +G  F++++++ MA+FNE+P+I ALSNPTS++EC+AE+ Y  +KGRAIFASGSPFDP    NG+   PGQ NN+Y+FPG  LG+V  G  ++ D++ L  +E +A+QV++++ E+G +YPP + IR              Y+   AT  P PQN      S MY+  Y
Sbjct:  376 LIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY 549          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.201e-38
Identity = 77/163 (47.24%), Postives = 106/163 (65.03%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVK 488
            +IG +G GR FT +VI AMAS NE+P+I ALSNPT+Q+ECTAEEAYT ++GR +FASGSPF P +  +G+VF PGQ NN YIFPG  L +++     + D + L A++AL  Q+T+E   +G +YPP +NI+              Y   +A R P P++  K
Sbjct:  389 IIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAK 551          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.356e-37
Identity = 79/173 (45.66%), Postives = 107/173 (61.85%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVY 521
            LIG+S V   F +EVI AMA  NE+P+I ALSNPTS++ECTAEEAYT++ G A++ASGSPF  FE NG  + PGQ NNAYIFPG  LG ++     V +D+ L A++ +A  VTE++ + G +YP    IR              Y+ G A   P+P++L K   + +Y   Y
Sbjct:  440 LIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEY 612          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.856e-37
Identity = 72/174 (41.38%), Postives = 112/174 (64.37%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVY 521
            LIG + +G  FT+++++ MA+FN++P+I ALSNPTS++ECTAE+ Y +++GR IFASGSPFDP    +G+   PGQ NN+Y+FPG  LG++  G   + DD+ L  +E +A++V+EEN ++G +YPP   I+              Y    A+  P+P++L     S +Y+  Y
Sbjct:  365 LIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDY 538          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.169e-36
Identity = 74/174 (42.53%), Postives = 112/174 (64.37%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVY 521
            LIG + +G  FT+++++ MA+FNE+P+I ALS+PTS++EC+A+E Y  +KGRAIFASGSPFDP    +G+   PGQ NN+Y+FPG  LG+V  G   + D + L   E +++QV++++ ++G +YPP + IR              Y+  +AT  P PQN  +   S MY+  Y
Sbjct:  376 LIGVAAIGGAFTEQILKDMAAFNERPIIFALSSPTSKAECSADECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTREVISQQVSDKHLQEGRLYPPLNTIRGVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNY 549          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.527e-36
Identity = 75/174 (43.10%), Postives = 109/174 (62.64%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVY 521
            LIG + +G  F++++++ MA+FNE+P+I ALSNPTS++ECTAE  YT ++GRAIFASGSPFDP    +G+   PGQ NN+Y+FPG  L +V  G   + D + L  +E +A+QV++++ E+G +YPP + IR              Y+   AT  P P N      S MY+  Y
Sbjct:  362 LIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAERGYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALAVVACGLRHITDKIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDY 535          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.605e-36
Identity = 72/177 (40.68%), Postives = 112/177 (63.28%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNY 530
            +IG + +   FT++++  MASF+E+P+I ALSNPTS++ECTAE+ Y  ++GR IFASGSPF      +GK F+PGQ NNAY+FPG  LG++  G   + D++ L  +E +A++V+E++  +G +YPP S IR              Y+  +A+  P P++      S +YTP Y ++
Sbjct:  411 IIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSF 587          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.293e-35
Identity = 70/177 (39.55%), Postives = 112/177 (63.28%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNY 530
            +IG + +   FT++++  MASF+E+P++ ALSNPTS++ECTAE+ Y  ++GR IFASGSPF      +G+ F PGQ NNAY+FPG  LG++  G   + D++ L  +E +A++V+E++  +G +YPP S IR              Y+  +A+  P P++     +S +YTP Y ++
Sbjct:  411 IIGVAAIAGAFTEQILRDMASFHERPIVFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFTPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAVKVLDYAYKHNLASYYPEPKDKEAFVKSLIYTPDYDSF 587          
The following BLAST results are available for this feature:
BLAST of DY260652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_ANAPL1.928e-3942.94NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_RAT1.632e-3844.25NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOX_HUMAN3.635e-3844.25NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOM_HUMAN6.201e-3847.24NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAOM_ASCSU2.356e-3745.66NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]
MAOX_COLLI6.856e-3741.38NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOX_MOUSE1.169e-3642.53NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOX_PIG1.527e-3643.10NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAON_HUMAN2.605e-3640.68NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAON_MOUSE1.293e-3539.55NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YD06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260652 ID=DY260652; Name=DY260652; organism=Citrus clementina; type=EST; length=979bp
TTTTGATTGGATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATC
GAGGCCATGGCCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAA
CCCAACCTCACAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTA
AGGGTCGTGCAATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATAC
AATGGAAAAGTTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCC
TGGATTTGGTTTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACG
ACATGCTTCTGGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAG
AACTTTGAGAAGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAAT
TTCAGCCAATATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCG
TGGCTACGCGTCTCCCTCGACCTCAGAATCTGGTGAAGTGCGCTGAAAGT
TGCATGTATACCCCTGTCTACCGAAACTATCGTTAAATGTTCGGCCAAAA
TTTCTGTCTCCGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTG
TTTTGGTGGGTTATGGTGGCTTTTGTACTTGTGCCAGTATTGCAGTATAT
GTGTACTTAACCAAAGGAAGTAGTGGACCCCTGATTAATAGGTTGATGCC
CTATATTTCACTTCTTCTAAGACTCTCTAATGCTCTTGCCACAGGTTGGA
ACTTGACAAAAGAGTTCTGCGTTTAACCAAGTTGTAACGAATACGGCGAC
TATCCTCCATTATTAATTTCTATATTTCTCAACTAATATTAATGTCAAAA
TAATGACGTTATACTAATAATAGAATATATCAAAATCCAACAGAAATCGA
GCTATCCCGTACCTCTCAGATTATATAATATCTTATTCCTTCCAGATGTT
TATCATTCTATTCCGTTTATCTTCTTTTT
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