DY260652

Overview
NameDY260652
Unique NameDY260652
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.085e-29
Identity = 69/177 (38.98%), Postives = 101/177 (57.06%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+               + GVA +    + L +  +   + P YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.085e-29
Identity = 69/177 (38.98%), Postives = 101/177 (57.06%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+               + GVA +    + L +  +   + P YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP3 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae (strain 342) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.085e-29
Identity = 71/177 (40.11%), Postives = 98/177 (55.37%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T +   +W+ G A+ A+GSPF P    GK +   Q NN+YIFPG GLG++ SGA RV D+ML+AASE LAK     N  +G + P   +I+               E GVA +    + L++      + P YRNYR
Sbjct:  386 LIGVSGQPGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQNILSWTDGEALVATGSPFAPVTLKGKQYAIAQCNNSYIFPGIGLGVIASGASRVTDEMLMAASETLAKHSPLVNNGEGPVLPELKDIQTVSRAIAFAVGKVAQEQGVAVK-TSAEALLQAISDNFWLPEYRNYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SALNS (NAD-dependent malic enzyme OS=Salmonella newport (strain SL254) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.029e-29
Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+               + GVA +    + L +  +   + P YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.029e-29
Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+               + GVA +    + L +  +   + P YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SALEP (NAD-dependent malic enzyme OS=Salmonella enteritidis PT4 (strain P125109) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.029e-29
Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+               + GVA +    + L +  +   + P YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.029e-29
Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+               + GVA +    + L +  +   + P YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP7 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sfcA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.975e-29
Identity = 70/177 (39.55%), Postives = 98/177 (55.37%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T +   +W+ G A+ A+GSPF P    GK +   Q NN+YIFPG GLG++ SGA RV D+ML+AASE LA+     N  +G + P   +I+               E GVA +    + L++      + P YRNYR
Sbjct:  386 LIGVSGQPGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQNILSWTDGEALVATGSPFSPVTVKGKQYPIAQCNNSYIFPGIGLGVIASGASRVTDEMLMAASETLAQHSPLVNNGEGPVLPELKDIQTVSRAIAFAVGKVAQEQGVAVK-TSAEALLQAISDNFWLPEYRNYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ENT38 (NAD-dependent malic enzyme OS=Enterobacter sp. (strain 638) GN=sfcA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.975e-29
Identity = 68/177 (38.42%), Postives = 100/177 (56.50%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M    E+P+++ LSNPTS+ E T ++   W++G A+ A+GSPFDP  +  KV+   Q NN+YIFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I                + GVA +      L +  +   + P YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCERPIVMPLSNPTSRVEATPQDIIVWTEGNALVATGSPFDPVIWKDKVYPIAQCNNSYIFPGIGLGVIASGASRITDEMLMSASETLAQHSPLVKNGEGLVLPELKDIHIVSRAIAFAVGKMAQQQGVAVK-TSADALQQAIDENFWMPEYRSYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.923e-28
Identity = 67/155 (43.23%), Postives = 86/155 (55.48%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLP 467
            L+G S   + F KE++  +AS+ EKP I  LSNPTS+SECTAEEA  ++ G  IFASGSPFDP E+ GK     Q NN+Y FPG GLGLV S A RV  +     +  +A   T E    G I+P   N+R                + +AT+ P
Sbjct:  411 LLGLSTCPKLFNKEMLSYVASYCEKPGIFPLSNPTSRSECTAEEAVEFTDGNLIFASGSPFDPVEWKGKTIQTNQCNNSYSFPGIGLGLVSSRATRVPFETFQVCARVIASLGTPEMLATGKIFPDLDNLRAVSLEVGIEVAKMAERMNIATQFP 565          
The following BLAST results are available for this feature:
BLAST of DY260652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SALAR3.085e-2938.98NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO1_SALA43.085e-2938.98NAD-dependent malic enzyme OS=Salmonella agona (st... [more]
MAO1_KLEP33.085e-2940.11NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_SALNS4.029e-2938.42NAD-dependent malic enzyme OS=Salmonella newport (... [more]
MAO1_SALG24.029e-2938.42NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO1_SALEP4.029e-2938.42NAD-dependent malic enzyme OS=Salmonella enteritid... [more]
MAO1_SALDC4.029e-2938.42NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO1_KLEP78.975e-2939.55NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_ENT388.975e-2938.42NAD-dependent malic enzyme OS=Enterobacter sp. (st... [more]
MAOH_NEOFR9.923e-2843.23Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YD06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260652 ID=DY260652; Name=DY260652; organism=Citrus clementina; type=EST; length=979bp
TTTTGATTGGATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATC
GAGGCCATGGCCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAA
CCCAACCTCACAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTA
AGGGTCGTGCAATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATAC
AATGGAAAAGTTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCC
TGGATTTGGTTTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACG
ACATGCTTCTGGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAG
AACTTTGAGAAGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAAT
TTCAGCCAATATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCG
TGGCTACGCGTCTCCCTCGACCTCAGAATCTGGTGAAGTGCGCTGAAAGT
TGCATGTATACCCCTGTCTACCGAAACTATCGTTAAATGTTCGGCCAAAA
TTTCTGTCTCCGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTG
TTTTGGTGGGTTATGGTGGCTTTTGTACTTGTGCCAGTATTGCAGTATAT
GTGTACTTAACCAAAGGAAGTAGTGGACCCCTGATTAATAGGTTGATGCC
CTATATTTCACTTCTTCTAAGACTCTCTAATGCTCTTGCCACAGGTTGGA
ACTTGACAAAAGAGTTCTGCGTTTAACCAAGTTGTAACGAATACGGCGAC
TATCCTCCATTATTAATTTCTATATTTCTCAACTAATATTAATGTCAAAA
TAATGACGTTATACTAATAATAGAATATATCAAAATCCAACAGAAATCGA
GCTATCCCGTACCTCTCAGATTATATAATATCTTATTCCTTCCAGATGTT
TATCATTCTATTCCGTTTATCTTCTTTTT
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