DY260652

Overview
NameDY260652
Unique NameDY260652
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SODGM (NAD-dependent malic enzyme OS=Sodalis glossinidius (strain morsitans) GN=sfcA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.887e-27
Identity = 70/177 (39.55%), Postives = 98/177 (55.37%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M    E+P+++ LSNPTS+ E T E+   W+ G A+ A+GSPF P ++ GK +   Q NNAYIFPG GLG++ SGA ++ D ML+AAS ALA      N + G + P  ++I+                 GVA  +   + L    E   + P YR+YR
Sbjct:  386 LIGVSGQPGLFTEEIIRDMHQHCERPIVMPLSNPTSRVEATPEDLLRWTDGAALVATGSPFAPVQFEGKTYPIAQCNNAYIFPGIGLGVLASGAGQITDAMLIAASRALADCSPLANGDGGALLPDINDIQSVSRVIAMAVAKAAQVHGVAL-VTSEETLSLAIEHNFWQPQYRDYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.771e-27
Identity = 70/177 (39.55%), Postives = 99/177 (55.93%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            L G SG    FT+EV+EA+ +  E P++L LSNPTS+ E T +E   WS+G+AI A+GSPF    + G+ +   Q NN+YIFPG GLG++ + A  + D+ML AAS+ALA    E     G I PP   IR               E  +A  +   +NL +  ++  + P YR+YR
Sbjct:  381 LFGVSGQKGLFTQEVVEALCANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDNMLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPV-TAENLERRLKANFWLPKYRDYR 556          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.925e-27
Identity = 66/177 (37.29%), Postives = 99/177 (55.93%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFAPVAWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKYSPLVLNGEGLVLPELKDIQTVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDENFWQAEYRDYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_AERHH (NAD-dependent malic enzyme OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sfcA PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.925e-27
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+EV++ M     +P+I  LSNPTS+ E T  +   W+ G+A+ A+GSPF P EY GK +V  Q NN++IFPG GLG++ +GA RV D ML++AS ALA+       E+G + P  ++I                  G A + P  + + +  E+  + P YR YR
Sbjct:  385 LIGVSGQPGLFTEEVVKTMHKHCARPIIFPLSNPTSRVEATPADLIRWTDGQALVATGSPFAPVEYKGKRYVIAQCNNSFIFPGIGLGVIAAGATRVTDAMLMSASRALAECSPLVKGEEGSLLPDLADIHQVSRYIAKMVAKTAMLQGKAVQTP-DEVIDQSIEANFWRPEYRRYR 560          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_VIBF1 (NAD-dependent malic enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sfcA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.400e-27
Identity = 68/177 (38.42%), Postives = 96/177 (54.24%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    F+KEVI+ M    E+P++  LSNPTS+ E T  +   W+ G+A+ A+GSPFDP  +NG+ +   Q NN++IFPG GLG++   A RV D+ML+ +S ALA+         G + PP   I                E G A  +   + L +  ES  + PVYR Y+
Sbjct:  383 LIGVSGAPGLFSKEVIQEMHKHCERPIVFPLSNPTSRVEATPNDIIRWTDGQALVATGSPFDPVAHNGQTYPIAQCNNSFIFPGIGLGVLAIKATRVTDEMLMESSRALAECSPLAIHGTGALLPPLEEIHSVSKRIAFAVAKKAIEQGHALEI-TDEALQQKIESYFWKPVYRRYK 558          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ERWCT (NAD-dependent malic enzyme OS=Erwinia carotovora subsp. atroseptica GN=sfcA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.400e-27
Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            +IG SG    FT+E+I  M     +P+++ LSNPTS+ E   E+   W++G A+ A+GSPF P  Y  KVF   Q NN+YIFPG GLG++ SGA R+ D ML+AAS ALA      N  +G + P  S+I+                 GVA  +     L K  +   + P YR+Y+
Sbjct:  386 MIGVSGQPGLFTEEIIREMYKHCARPIVMPLSNPTSRVEARPEDIIRWTEGSALVATGSPFSPVHYQDKVFPIAQCNNSYIFPGIGLGVLASGANRITDGMLMAASRALADCSPLANNGEGALLPDLSDIQQVSKRIALDVGKAAQLQGVAV-VTSADALQKAIDHNFWQPQYRSYK 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.400e-27
Identity = 69/177 (38.98%), Postives = 98/177 (55.37%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+EV++ M     +P+I  LSNPTS+ E T  +   W+ G+A+ A+GSPF P EY GK +V  Q NN++IFPG GLG++ SGA RV D ML++AS ALA+        +G + P  ++I                  G A + P  + + +  E+  + P YR YR
Sbjct:  385 LIGVSGQPGLFTEEVVKTMHKHCTRPIIFPLSNPTSRVEATPADLIRWTDGQALVATGSPFAPVEYKGKRYVIAQCNNSFIFPGIGLGVIASGATRVTDAMLMSASRALAECSPLVKGAEGSLLPDLADIHQVSRYIAKMVAKTAMLQGKAVQTP-DEVIDQAIEANFWRPEYRRYR 560          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.097e-26
Identity = 68/177 (38.42%), Postives = 96/177 (54.24%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    F+KEVI+ M    E+P++  LSNPTS+ E T  +   W+ G+A+ A+GSPFDP  +NG+ +   Q NN++IFPG GLG++   A RV D+ML+ +S ALA+         G + PP   I                E G A  +   + L +  ES  + PVYR Y+
Sbjct:  383 LIGVSGAPGLFSKEVIQEMHKHCERPIVFPLSNPTSRVEATPNDIIRWTNGQALVATGSPFDPVSHNGQTYPIAQCNNSFIFPGIGLGVLAIKATRVTDEMLMESSRALAECSPLAINGTGALLPPLEEIHSVSKRIAFAVAKKAIEQGHALEI-TDEALHQKIESYFWKPVYRRYK 558          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.097e-26
Identity = 69/177 (38.98%), Postives = 98/177 (55.37%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+EVI  +A   E+P+++ LSNPTS+ E    +   W+ GRA+ A+GSPF P  Y GK++   Q NN+YIFPG GLG++ SGA RV D+ML+A+S ALA            + P  ++I+               E GVA  +   + L++  E   + P YR Y+
Sbjct:  387 LIGVSGQPGLFTEEVIRTLAENCERPIVMPLSNPTSRVEALPSDVIQWTNGRALIATGSPFAPVNYQGKLYNISQCNNSYIFPGIGLGVIASGAKRVTDNMLMASSNALADCSPLLQNPNADLLPAIADIQDVSKRIAFKVAKAAIEDGVALNM-SDEVLLQNIEKEFWKPKYRGYK 562          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.433e-26
Identity = 69/177 (38.98%), Postives = 95/177 (53.67%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E   E+   W++G A+ A+GSPF P  Y  KVF   Q NN+YIFPG GLG++ SGA R+ D ML+AAS ALA      N  +G + P  ++I+                 G A  +     L K  E   + P YR+Y+
Sbjct:  386 LIGVSGQPGLFTEEIIREMHKHCARPIVMPLSNPTSRVEARPEDIIRWTEGAALVATGSPFSPVNYQDKVFPIAQCNNSYIFPGIGLGVLASGAKRITDGMLMAASRALADCSPLANNGEGALLPDLADIQQVSKRIALEVGKAAQLQGAAV-VTSSDALQKAIEHNFWQPQYRSYK 561          
The following BLAST results are available for this feature:
BLAST of DY260652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SODGM2.887e-2739.55NAD-dependent malic enzyme OS=Sodalis glossinidius... [more]
MAO1_PSYCK3.771e-2739.55NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_CITK84.925e-2737.29NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAO1_AERHH4.925e-2738.98NAD-dependent malic enzyme OS=Aeromonas hydrophila... [more]
MAO1_VIBF18.400e-2738.42NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_ERWCT8.400e-2738.98NAD-dependent malic enzyme OS=Erwinia carotovora s... [more]
MAO1_AERS48.400e-2738.98NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]
MAO1_VIBFM1.097e-2638.42NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_ACIAD1.097e-2638.98NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_PECCP1.433e-2638.98NAD-dependent malic enzyme OS=Pectobacterium carot... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YD06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260652 ID=DY260652; Name=DY260652; organism=Citrus clementina; type=EST; length=979bp
TTTTGATTGGATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATC
GAGGCCATGGCCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAA
CCCAACCTCACAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTA
AGGGTCGTGCAATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATAC
AATGGAAAAGTTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCC
TGGATTTGGTTTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACG
ACATGCTTCTGGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAG
AACTTTGAGAAGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAAT
TTCAGCCAATATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCG
TGGCTACGCGTCTCCCTCGACCTCAGAATCTGGTGAAGTGCGCTGAAAGT
TGCATGTATACCCCTGTCTACCGAAACTATCGTTAAATGTTCGGCCAAAA
TTTCTGTCTCCGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTG
TTTTGGTGGGTTATGGTGGCTTTTGTACTTGTGCCAGTATTGCAGTATAT
GTGTACTTAACCAAAGGAAGTAGTGGACCCCTGATTAATAGGTTGATGCC
CTATATTTCACTTCTTCTAAGACTCTCTAATGCTCTTGCCACAGGTTGGA
ACTTGACAAAAGAGTTCTGCGTTTAACCAAGTTGTAACGAATACGGCGAC
TATCCTCCATTATTAATTTCTATATTTCTCAACTAATATTAATGTCAAAA
TAATGACGTTATACTAATAATAGAATATATCAAAATCCAACAGAAATCGA
GCTATCCCGTACCTCTCAGATTATATAATATCTTATTCCTTCCAGATGTT
TATCATTCTATTCCGTTTATCTTCTTTTT
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