DY260652

Overview
NameDY260652
Unique NameDY260652
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ECO45 (NAD-dependent malic enzyme OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.192e-26
Identity = 64/177 (36.16%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWHAEYRDYR 561
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ECO27 (NAD-dependent malic enzyme OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.192e-26
Identity = 64/177 (36.16%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWHAEYRDYR 561
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 66/177 (37.29%), Postives = 93/177 (52.54%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    F++EVIE M    ++P++  LSNPTS+ E T  +   W+ G A+ A+GSPFDP  + G+ +   Q NN+YIFPG GLG++   A RV D+ML+ +S ALA         +G + PP   I                E GVA  +   + L    +   + PVYR Y+
Sbjct:  383 LIGVSGAPGLFSQEVIEEMHKHCKRPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFDPVVHEGRTYPIAQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGRGALLPPLEEIHLVSKKIAFAVAKKAIEQGVALEI-TDEALNDAIDQAFWQPVYRRYK 558
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLI (NAD-dependent malic enzyme OS=Escherichia coli (strain K12) GN=sfcA PE=3 SV=4)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL6 (NAD-dependent malic enzyme OS=Escherichia coli O6 GN=sfcA PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 64/177 (36.16%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASEMLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWHAEYRDYR 561
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ECOHS (NAD-dependent malic enzyme OS=Escherichia coli O9:H4 (strain HS) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ECODH (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / DH10B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ECOBW (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / BW2952) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+               + GVA +    + L +  +   +   YR+YR
Sbjct:  386 LIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 66/177 (37.29%), Postives = 95/177 (53.67%), Query Frame = 3 
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    F+KEVI+ M    E+P++  LSNPTS+ E T  +   W+ G+A+ A+GSPFDP  +NG+ +   Q NN++IFPG GLG++   A RV D+ML  +S AL++         G + PP   I                E G A  +   + L++  E   + PVYR Y+
Sbjct:  383 LIGVSGAPGLFSKEVIQEMHKHCERPIVFPLSNPTSRVEATPNDIIRWTDGQALVATGSPFDPVTHNGQTYPIAQCNNSFIFPGIGLGVLAIKATRVSDEMLRESSRALSECSPLAINGSGALLPPLEEIHTVSKKIAFAVAKKAIEQGYALEI-TDEALMQKIEQYFWKPVYRRYK 558
The following BLAST results are available for this feature:
BLAST of DY260652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECO453.192e-2636.16NAD-dependent malic enzyme OS=Escherichia coli O45... [more]
MAO1_ECO273.192e-2636.16NAD-dependent malic enzyme OS=Escherichia coli O12... [more]
MAO1_VIBPA4.169e-2637.29NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_ECOLI4.169e-2635.59NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLC4.169e-2635.59NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOL64.169e-2636.16NAD-dependent malic enzyme OS=Escherichia coli O6 ... [more]
MAO1_ECOHS4.169e-2635.59NAD-dependent malic enzyme OS=Escherichia coli O9:... [more]
MAO1_ECODH4.169e-2635.59NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOBW4.169e-2635.59NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ALISL4.169e-2637.29NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YD06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260652 ID=DY260652; Name=DY260652; organism=Citrus clementina; type=EST; length=979bp
TTTTGATTGGATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATC
GAGGCCATGGCCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAA
CCCAACCTCACAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTA
AGGGTCGTGCAATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATAC
AATGGAAAAGTTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCC
TGGATTTGGTTTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACG
ACATGCTTCTGGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAG
AACTTTGAGAAGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAAT
TTCAGCCAATATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCG
TGGCTACGCGTCTCCCTCGACCTCAGAATCTGGTGAAGTGCGCTGAAAGT
TGCATGTATACCCCTGTCTACCGAAACTATCGTTAAATGTTCGGCCAAAA
TTTCTGTCTCCGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTG
TTTTGGTGGGTTATGGTGGCTTTTGTACTTGTGCCAGTATTGCAGTATAT
GTGTACTTAACCAAAGGAAGTAGTGGACCCCTGATTAATAGGTTGATGCC
CTATATTTCACTTCTTCTAAGACTCTCTAATGCTCTTGCCACAGGTTGGA
ACTTGACAAAAGAGTTCTGCGTTTAACCAAGTTGTAACGAATACGGCGAC
TATCCTCCATTATTAATTTCTATATTTCTCAACTAATATTAATGTCAAAA
TAATGACGTTATACTAATAATAGAATATATCAAAATCCAACAGAAATCGA
GCTATCCCGTACCTCTCAGATTATATAATATCTTATTCCTTCCAGATGTT
TATCATTCTATTCCGTTTATCTTCTTTTT
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