DY260652

Overview
NameDY260652
Unique NameDY260652
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.111e-26
Identity = 62/174 (35.63%), Postives = 101/174 (58.05%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYR 524
            LIG+SGV   FT+E+++ MAS  ++P+I+ +SNPT  +E   E+ + W+ G+ + A+GSPFD  EYNG  +  GQ+NNA+ FPG GLG +++ A  +   M  A ++A+A+ V  E    GL+ P    ++               + GVA R  +P+++ +     M+TP Y+
Sbjct:  407 LIGTSGVSGAFTEEIVKEMASHVDRPVIMPMSNPTHLAEAVPEDLFKWTDGKVLIATGSPFDNVEYNGVSYEIGQSNNAFAFPGLGLGSIVAEARIITPAMFAATADAIAEMVDLETPGAGLL-PSIDKLQEVSIQVAIAVAEAAIKDGVANR--QPEDVKQAVLDAMWTPEYK 577          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.111e-26
Identity = 68/178 (38.20%), Postives = 102/178 (57.30%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I+AM S  ++P++  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   NG+ F   Q NN++IFPG GLG++  GA RV D+ML+A+S ALA+         G + P   +I+               + G+A  LP    L+ +  E+  + P YR Y+
Sbjct:  383 LIGVSGSPGLFTEEIIKAMHSHCKRPIVFPLSNPTSRVEATPKDILNWTSGQALVATGSPFEPVIVNGETFEIAQCNNSFIFPGIGLGVLSCGARRVSDEMLMASSRALAECSPLGKDGVGSLLPRLEDIQTVSKYIAFAVAKAAIDQGLA--LPCTDELLQQSIEANFWEPEYRRYK 558          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.111e-26
Identity = 66/177 (37.29%), Postives = 96/177 (54.24%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            L G SG    FT+EV+E++ +  + P++L LSNPTS+ E T ++  TWS G+AI A+GSPF P  Y  +     Q NN+YIFPG GLG++ + A  + D+ML+AAS+ALA    +    KG + PP   IR                 G+A  +   + + +      + P YR YR
Sbjct:  381 LFGVSGQPGLFTQEVVESLCANVDHPIVLPLSNPTSRVEATPKDITTWSHGQAIVATGSPFPPTLYENEYIEVSQCNNSYIFPGIGLGVLAARATAISDNMLMAASQALADASMQYEKVKGALLPPLGEIRPISKSIAYAVAKQAIADGLALPVSE-ETMQRRLVDNFWAPKYRTYR 556          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.213e-25
Identity = 67/177 (37.85%), Postives = 95/177 (53.67%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            +IG SG    F++E++  M     +P+I+ LSNPTS+ E T ++   W+ G A+ A+GSPF P  +  K +   Q NN+YIFPG GLG++ SGA RV D ML+AAS ALA      N  +G + P  ++I+                 GVA  +     L K   +  + P YRNYR
Sbjct:  386 MIGVSGQPGLFSEEIVREMHKHCTRPIIMPLSNPTSRVEATPQDIMAWTDGCALVATGSPFSPVSWKDKTYPIAQCNNSYIFPGIGLGVIASGASRVTDSMLMAASRALADCSPLVNDGEGPVLPEVNDIQGVSKIIAMAVGKAAQLAGVAV-VTSEDVLSKAIAANFWLPQYRNYR 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.584e-25
Identity = 66/133 (49.62%), Postives = 85/133 (63.91%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMA-SFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIR 395
            L+G S  G  F+KEV+EA+  S + +P I  +SNPT  +ECT EEA++      IFASGSPF   +  NG V    QANN ++FPG GLG ++SG+  V D ML AA+E LA  +TEE   KG+IYP  S IR
Sbjct:  434 LLGLSACGGLFSKEVLEALKHSTSTRPAIFPMSNPTRNAECTPEEAFSILGENIIFASGSPFKDVDLGNGHVGHCNQANNMFLFPGIGLGTLLSGSRIVSDGMLQAAAECLAAYITEEEVLKGIIYPSISRIR 566          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_YERE8 (NAD-dependent malic enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sfcA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.069e-25
Identity = 68/177 (38.42%), Postives = 94/177 (53.11%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT+E+I  M     +P+++ LSNPTS+ E   E+   W+ G A+ A+GSPF P  Y  K++   Q NN+YIFPG GLG++ SGA RV D ML+AAS ALA+        +G + P   +I+                 GVA  +   + L K  E   + P YR Y+
Sbjct:  386 LIGVSGQPGLFTEELIREMHKHCARPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFSPVSYKEKLYPIAQCNNSYIFPGIGLGVLASGAKRVTDGMLMAASRALAQCSPLAQNGEGALLPNIDDIQAVSKTIAMQVGKAAQLQGVAI-VTSEEALAKAIEHNYWQPQYRTYK 561          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SHELP (NAD-dependent malic enzyme OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.702e-25
Identity = 68/178 (38.20%), Postives = 100/178 (56.18%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQN-LVKCAESCMYTPVYRNYR 533
            LIG SG    F++E+I+AM +  E+P+I  LSNPTS+ E T ++   W+KG+A+ A+GSPF+P     + +   Q NN+YIFPG GLG++ SGA RV ++ML+A+S ALA+        +G + P   +I                E G A  LP     L++  E   +T  YR Y+
Sbjct:  383 LIGVSGAPGLFSEEIIKAMHTHCERPIIFPLSNPTSRVEATPKDILHWTKGQALVATGSPFEPVVIEEQTYEIAQCNNSYIFPGIGLGVLASGAKRVSNEMLMASSRALAECSPLAKDGEGSLLPALEDIHSVSKHIAFAVGKVAIEQGHA--LPASDELLMQAIEDNFWTAEYRRYK 558          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.702e-25
Identity = 69/177 (38.98%), Postives = 92/177 (51.98%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 533
            LIG SG    FT++VI  +     KPL++ LSNPTS+ E T EE   W+ G A+ A+GSPF P E NG+     Q NN+YIFPG GLG+V   A R+ D ML+AAS ALA+       +   + PP   I+                 G+A      + L++  E   + P YR YR
Sbjct:  384 LIGVSGQRGLFTEQVIRELHKHCAKPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRMLMAASNALAECSPMVTGQGDAVLPPLKEIQQVSRKIALAVAKEAQAEGLALETSE-EALLEAIERNFWLPGYRAYR 559          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.529e-25
Identity = 68/178 (38.20%), Postives = 98/178 (55.06%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 533
            LIG SGV   FT+E+I AM S   +P+I  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   +G+ F   Q NN++IFPG GLG++ SGA  V D ML+A+S ALA+         G + P   +I                E G+   LP    ++ +  E   ++P YR Y+
Sbjct:  383 LIGVSGVPGLFTEEIIRAMHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETFEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLT--LPMSDEILQQSIEGNFWSPEYRRYK 558          
BLAST of DY260652 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.529e-25
Identity = 68/178 (38.20%), Postives = 98/178 (55.06%), Query Frame = 3
Query:    3 LIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 533
            LIG SGV   FT+E+I AM S   +P+I  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   +G+ F   Q NN++IFPG GLG++ SGA  V D ML+A+S ALA+         G + P   +I                E G+   LP    ++ +  E   ++P YR Y+
Sbjct:  383 LIGVSGVPGLFTEEIIRAMHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETFEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLT--LPMSDEILQQSIEGNFWSPEYRRYK 558          
The following BLAST results are available for this feature:
BLAST of DY260652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO2_BACSU7.111e-2635.63Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAO1_SHEFN7.111e-2638.20NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_PSYIN7.111e-2637.29NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO1_ERWT91.213e-2537.85NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]
MAOM_SOLTU1.584e-2549.62NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAO1_YERE82.069e-2538.42NAD-dependent malic enzyme OS=Yersinia enterocolit... [more]
MAO1_SHELP2.702e-2538.20NAD-dependent malic enzyme OS=Shewanella loihica (... [more]
MAO1_PSE142.702e-2538.98NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_SHEB83.529e-2538.20NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB23.529e-2538.20NAD-dependent malic enzyme OS=Shewanella baltica (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YD06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260652 ID=DY260652; Name=DY260652; organism=Citrus clementina; type=EST; length=979bp
TTTTGATTGGATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATC
GAGGCCATGGCCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAA
CCCAACCTCACAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTA
AGGGTCGTGCAATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATAC
AATGGAAAAGTTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCC
TGGATTTGGTTTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACG
ACATGCTTCTGGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAG
AACTTTGAGAAGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAAT
TTCAGCCAATATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCG
TGGCTACGCGTCTCCCTCGACCTCAGAATCTGGTGAAGTGCGCTGAAAGT
TGCATGTATACCCCTGTCTACCGAAACTATCGTTAAATGTTCGGCCAAAA
TTTCTGTCTCCGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTG
TTTTGGTGGGTTATGGTGGCTTTTGTACTTGTGCCAGTATTGCAGTATAT
GTGTACTTAACCAAAGGAAGTAGTGGACCCCTGATTAATAGGTTGATGCC
CTATATTTCACTTCTTCTAAGACTCTCTAATGCTCTTGCCACAGGTTGGA
ACTTGACAAAAGAGTTCTGCGTTTAACCAAGTTGTAACGAATACGGCGAC
TATCCTCCATTATTAATTTCTATATTTCTCAACTAATATTAATGTCAAAA
TAATGACGTTATACTAATAATAGAATATATCAAAATCCAACAGAAATCGA
GCTATCCCGTACCTCTCAGATTATATAATATCTTATTCCTTCCAGATGTT
TATCATTCTATTCCGTTTATCTTCTTTTT
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