DY260690

Overview
NameDY260690
Unique NameDY260690
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length874
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.725e-44
Identity = 100/197 (50.76%), Postives = 127/197 (64.47%), Query Frame = 3
Query:   90 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            D   LQDVCVA  D    V VNG  CK      A DF    + KPG T N+ G   T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+HFQ N G+  AA  SA NSQ PG  +I   +FGA+P +  D L + FQ++ + V+ +++KF
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKF 223          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.849e-43
Identity = 99/197 (50.25%), Postives = 122/197 (61.93%), Query Frame = 3
Query:   90 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            D   LQD+CVA  D    + VNG  CK      AEDFF + L K G T N  G   T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+ FVFP+GL+HFQ N G   A   +  NSQ PG V I   +F A P +  + L KAFQ+  K V+ +++KF
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKF 213          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.849e-43
Identity = 94/198 (47.47%), Postives = 126/198 (63.64%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            +D   LQD CV   D K    +NG  CK      A DFFFSGLG P NT+   GV  + ANV   PGLNTLG+S   +++AP G  PPH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++FV P+GL+HFQ+N+GK  A   ++ NSQ PG   +   +FG+NP+I    L K F+ D   V  L++KF
Sbjct:   28 SDSDPLQDFCVG--DLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.849e-43
Identity = 93/198 (46.97%), Postives = 127/198 (64.14%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            +D   LQD CV   D K    +NG  CK      A DFF+SGLG P +T+N  GV    ANV   PGLNTLGIS   ++ AP G  PPH+HPRA+E+  V+EG+++VGF+++   NNTL +KVLN G+ FV P+GL+HFQ+N+G+  A   +A NSQ PG V +   +FG+ P I    L +AF+ D   V++L++KF
Sbjct:   28 SDSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKF 218          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.766e-42
Identity = 94/202 (46.53%), Postives = 128/202 (63.37%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 689
            TDP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +   +FG+NP I    L KA +++ ++V+ L++KF  G
Sbjct:   24 TDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAG 223          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.014e-41
Identity = 91/169 (53.85%), Postives = 109/169 (64.50%), Query Frame = 3
Query:   90 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFG 596
            DP  LQD+CVA  D   G+ +NG  CKD     + DFF  GL KPG T N  G   T ANV  IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDVF FP+GL+HFQ N G   A+  +A NSQ PG  ++   +FG
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT---ANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.034e-41
Identity = 93/203 (45.81%), Postives = 126/203 (62.07%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 692
            ++P  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+     NSQ P  V +   +FG+NP I    L KA +++  +V+ L++KF  G+
Sbjct:   24 SNPHPLQDFCVADLDGK-AVSVNGHMCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKSKFAGGS 224          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.465e-40
Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 689
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +   +FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:   24 SDPDPLQDFCVADLDGK-AVSVNGHPCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAG 223          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.913e-40
Identity = 93/203 (45.81%), Postives = 127/203 (62.56%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 692
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +   +FG++P I    L KA +++  +V+ L++KF  G+
Sbjct:    1 SDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.494e-40
Identity = 91/203 (44.83%), Postives = 124/203 (61.08%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 689
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +  + N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +   +FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKFTGG 228          
The following BLAST results are available for this feature:
BLAST of DY260690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
NEC1_NICLS3.725e-4450.76Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
RHRE_PEA1.849e-4350.25Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GLT2_ARATH1.849e-4347.47Germin-like protein subfamily T member 2 OS=Arabid... [more]
GLT1_ARATH1.849e-4346.97Germin-like protein subfamily T member 1 OS=Arabid... [more]
GER2_WHEAT7.766e-4246.53Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GL21_ARATH1.014e-4153.85Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GER3_WHEAT5.034e-4145.81Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU1.465e-4045.54Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU1.913e-4045.81Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL34_ORYSJ9.494e-4044.83Putative germin-like protein 3-4 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YF02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260690 ID=DY260690; Name=DY260690; organism=Citrus clementina; type=EST; length=874bp
CATCCTGTGACTTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTT
GCCCTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCA
TCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTG
TGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTC
TTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGT
TGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTG
GCATATCAGCATTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCT
CACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCT
TTATGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTCATCGCAA
AAGTTCTAAATAAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCAC
TTCCAATTCAACATTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAA
CAGCCAATTCCCGGGTGAAGTTACCATAGCCGACCCAGTCTTTGGAGCCA
ATCCTTCAATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCA
AAGATAGTGAAAGATCTTCAAAATAAGTTCATTAATGGCAATTAGGAGAA
GGAATTAATGAGCTTTAATATAAATGGCCTCCTCCACAGTGGCTGTATTA
ACTTATCTCCCAGATTTACCTATCTTAATTAATGTAATAAAAAAAGGTCC
CTCATGAACCCCTCCTCCAGGCGAATGGGGGCCATGTAATAAACCTAAAT
TGTTATTGTTTTTATTATACCGCC
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