DY260690

Overview
NameDY260690
Unique NameDY260690
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length874
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.619e-39
Identity = 100/204 (49.02%), Postives = 124/204 (60.78%), Query Frame = 3
Query:   90 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKP------GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFI 683
            DP  LQD CVA  DP   V VNG  CKDP    A+DFFFSG+G+P      G TA+R     T  +V+ IPGLNTLG SA R+D AP G  PPH HPRASE  +VL G +Y GFVTS   ++ ++AKVL +GDVF  PQGL+HF  N G   AA Y++L+SQ PG V +AD +  A   +  D + K    D   V  ++  FI
Sbjct:   30 DPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRR-YGFTARSVD-IPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTS-YPDSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAA--PLPVDLVAKTLLTDEATVDKIRANFI 226          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.115e-39
Identity = 91/203 (44.83%), Postives = 123/203 (60.59%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 689
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +   +FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 228          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.712e-39
Identity = 90/203 (44.33%), Postives = 122/203 (60.10%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 689
            TD   LQD CVA  D    V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +   +FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   27 TDADPLQDFCVA--DLNSEVTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.338e-38
Identity = 88/204 (43.14%), Postives = 120/204 (58.82%), Query Frame = 3
Query:   90 DPGHLQDVCVAINDPKDGVFVN-------GKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            DP  +QD CVA+  P+ G           G  CK      ++DFFF+GL    +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E+  V+ G +  GFV++        +KVL +G+ FV P+G+IHFQ+N+G   A   +A NSQ PG V     +FG++P I    L K+FQ+D KI+K L++KF
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.804e-38
Identity = 90/201 (44.78%), Postives = 120/201 (59.70%), Query Frame = 3
Query:   90 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 689
            DP  LQD CVA  D +  V +NG  CK    A  E  F S L   G+  AN  G + T  +V   PG+NTLG+S  RID+AP G  PPH+HPRA+E+ +VL G L VG + S    N   ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +   +FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.585e-37
Identity = 84/201 (41.79%), Postives = 119/201 (59.20%), Query Frame = 3
Query:   90 DPGHLQDVCVAINDPKDGVFVNGKF----CKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            DP  +QD CVA+  P+ G   +  +    CK      ++DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G  P H HPRA+E+  V+ G + VGFV++        +KV+ +G+ F  P+GL+HFQ+N G  +A A +  NSQ PG V  A  +FGA+P I    L K+FQ+D +I+K L++KF
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.784e-34
Identity = 82/197 (41.62%), Postives = 114/197 (57.87%), Query Frame = 3
Query:   90 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            D   LQD+CVA  D +    V+G  CK      ++DFF   + +  +T+N  GV+ T A V   PGLNTLG+S  R D AP G  PPH HPRASE+ LVL G + VGF T+    N L +KV+ + ++FV P+GL HFQ N+G  NA+  +  +SQ PG VT    +F   P++  + L K F +    V  +++KF
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTA---ANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKF 221          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.504e-32
Identity = 78/192 (40.62%), Postives = 110/192 (57.29%), Query Frame = 3
Query:  105 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            QD CVA  D +     +G  CK      +EDFF+SGL  P NT+N  G+    AN+   PGLNTLGIS + +  AP G   PH HP  +E  +V+EG++ VGF+T+   N TL +KV+  GD+FV P GLIH++ N+GKT     + +    P EV +   +    P+I  + L  AF+ D K +  L++KF
Sbjct:   41 QDFCVA--DLQATPTNSGYPCKSQ--VTSEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.271e-32
Identity = 83/201 (41.29%), Postives = 108/201 (53.73%), Query Frame = 3
Query:   87 TDPGHLQDVCVA--INDP-KDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 680
            +DP  +QD C+   +  P  D  F     CK+      EDF FSGL   GN     G        E  PGLNTLGIS  R D  P    PPH HPRA+E+  +++G +Y GFV S   NN + AKV+ +G++ V+P+GL+HFQ N+G   A     LNSQ PG   I   VFG+   IN + L KAF L  K +  L+ +F
Sbjct:   25 SDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGS--GINEELLMKAFGLSLKQIGTLKKRF 219          
BLAST of DY260690 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.769e-31
Identity = 75/190 (39.47%), Postives = 111/190 (58.42%), Query Frame = 3
Query:   87 TDPGHLQDVCVAINDPK-DGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAA-AYSALNSQFPGEVTIADPVFGANPSINPDFLGKAFQLD 647
            +DP  LQD CV+        +F+NGK CKDP  A   DF  S L +PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH+HPRASE+ + L+G L VGFV +   +  +  + L+ G+ FVFP+GLIHF +NI   ++A A S L+SQ PG   ++   F + P    + L  A+ ++
Sbjct:   18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDIN 204          
The following BLAST results are available for this feature:
BLAST of DY260690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL51_ORYSJ1.619e-3949.02Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL36_ORYSJ2.115e-3944.83Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ4.712e-3944.33Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL38_ORYSJ2.338e-3843.14Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ6.804e-3844.78Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ2.585e-3741.79Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL12_ORYSJ7.784e-3441.62Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GLT3_ARATH2.504e-3240.63Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL32_ARATH4.271e-3241.29Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL11_ARATH2.769e-3139.47Germin-like protein subfamily 1 member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YF02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260690 ID=DY260690; Name=DY260690; organism=Citrus clementina; type=EST; length=874bp
CATCCTGTGACTTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTT
GCCCTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCA
TCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTG
TGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTC
TTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGT
TGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTG
GCATATCAGCATTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCT
CACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCT
TTATGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTCATCGCAA
AAGTTCTAAATAAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCAC
TTCCAATTCAACATTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAA
CAGCCAATTCCCGGGTGAAGTTACCATAGCCGACCCAGTCTTTGGAGCCA
ATCCTTCAATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCA
AAGATAGTGAAAGATCTTCAAAATAAGTTCATTAATGGCAATTAGGAGAA
GGAATTAATGAGCTTTAATATAAATGGCCTCCTCCACAGTGGCTGTATTA
ACTTATCTCCCAGATTTACCTATCTTAATTAATGTAATAAAAAAAGGTCC
CTCATGAACCCCTCCTCCAGGCGAATGGGGGCCATGTAATAAACCTAAAT
TGTTATTGTTTTTATTATACCGCC
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