DY260712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: R51A2_MAIZE (DNA repair protein RAD51 homolog B OS=Zea mays GN=RAD51B PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.660e-55 Identity = 90/168 (53.57%), Postives = 112/168 (66.67%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLSNPK 920 GIETG+ITE +GEFRSGKTQL HTLCV QLP + GG GK YID EGTFRP RI+ IA+RFG++ VL+N+ YARAY +HQ LLL A+ M E F L++VDS AL+R DF+GRGE + RQ + K QK+++ VAV TNQ A G + P+ Sbjct: 117 GIETGSITEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRILQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMVVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGAAMFAGPQ 284 HSP 2 Score: 62.3882 bits (150), Expect = 2.660e-55 Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 202 IDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGS 399 I++L + GI A DVKKL+DAG+ T + +K L IKG+SEAKV+KI EAA K+V G+ + S Sbjct: 26 IEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIKGISEAKVDKIIEAASKLVPLGFTSAS 91
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: R51A1_MAIZE (DNA repair protein RAD51 homolog A OS=Zea mays GN=RAD51A PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 4.521e-55 Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLSNPK 920 GIETG+ITE +GEFRSGKTQL HT CV QLP + GG GK YID EGTFRP R++ IA+RFG++ VL+N+ YARAY +HQ LLL A+ M E F L++VDS AL+R DF+GRGE + RQ + K QK+++ VAV TNQ A G + P+ Sbjct: 117 GIETGSITEIYGEFRSGKTQLCHTPCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALMVVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAMFAGPQ 284 HSP 2 Score: 64.6994 bits (156), Expect = 4.521e-55 Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 130 AEEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGS 399 A++Q + E+E++ E F I++L + GI A DVKKL+D+G++T + +K L IKG+SEAK +KI EAA KIV G+ + S Sbjct: 5 AQQQQKAAAAEQEEV--EHGPFP-IEQLQASGIAALDVKKLKDSGLHTVEAVAYTPRKDLLQIKGISEAKADKIIEAASKIVPLGFTSAS 91
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RA51B_XENLA (DNA repair protein RAD51 homolog B OS=Xenopus laevis GN=rad51-B PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.522e-55 Identity = 88/171 (51.46%), Postives = 115/171 (67.25%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGG-FLSNPKKP 926 GIETG+ITE FGEFR+GKTQL HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+ VLDN+ YARA+ +HQ LL +A M+E + LLIVDS AL+R D++GRGE + RQ + + ++++ VAV TNQ A G F ++PKKP Sbjct: 113 GIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKP 283 HSP 2 Score: 67.0106 bits (162), Expect = 4.522e-55 Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 181 EEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 402 EE+ F +AI +L GINA DVKKL+DAG +T + KK L IKG+SEAK EKI A K+V G+ T ++ Sbjct: 13 EEENFGPQAITRLEQCGINANDVKKLEDAGFHTVEAVAYAPKKELLNIKGISEAKAEKILAEAAKLVPMGFTTATE 88
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RAD51_SOLLC (DNA repair protein RAD51 homolog OS=Solanum lycopersicum GN=RAD51 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 5.893e-55 Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGGFLSNPK 920 GIETG+ITE +GEFR GKTQL HTLCV QLP + GG GK YID EGTFRP R++ IA+R+G++ VL+N+ YARAY +HQ LLL A+ M E F L+IVDS AL+R DF+GRGE + RQ + K QK+++ VAV TNQ A G + P+ Sbjct: 119 GIETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAVFAGPQ 286 HSP 2 Score: 65.855 bits (159), Expect = 5.893e-55 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 133 EEQSQLQLVEREDIDDEEDLFEA---IDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGS 399 E+Q + Q ++ D+ ED+ +++L + GI A DVKKL+DAG+ T ++ +K L IKG+SEAKV+KI EAA K+V G+ + S Sbjct: 2 EQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPRKELLQIKGISEAKVDKIIEAASKLVPLGFTSAS 93
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RAD51_HUMAN (DNA repair protein RAD51 homolog 1 OS=Homo sapiens GN=RAD51 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.894e-55 Identity = 87/171 (50.88%), Postives = 114/171 (66.67%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGG-FLSNPKKP 926 GIETG+ITE FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+ VLDN+ YARA+ +HQ LL +A M E + LLIVDS AL+R D++GRGE + RQ + + ++++ VAV TNQ A G F ++PKKP Sbjct: 116 GIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKP 286 HSP 2 Score: 68.5514 bits (166), Expect = 5.894e-55 Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 145 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 402 Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L IKG+SEAK +KI A K+V G+ T ++ Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTATE 91
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RA51A_XENLA (DNA repair protein RAD51 homolog A OS=Xenopus laevis GN=rad51-A PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 7.684e-55 Identity = 87/171 (50.88%), Postives = 115/171 (67.25%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGG-FLSNPKKP 926 G+ETG+ITE FGEFR+GKTQL HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+ VLDN+ YARA+ +HQ LL +A M+E + LLIVDS AL+R D++GRGE + RQ + + ++++ VAV TNQ A G F ++PKKP Sbjct: 113 GVETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKP 283 HSP 2 Score: 66.6254 bits (161), Expect = 7.684e-55 Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 1 Query: 160 EREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 402 E E ++E +AI +L GINA DVKKL++AG +T + KK L IKG+SEAK EKI A K+V G+ T ++ Sbjct: 8 EAEATEEEHFGPQAISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELLNIKGISEAKAEKILAEAAKLVPMGFTTATE 88
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RAD51_CHICK (DNA repair protein RAD51 homolog 1 OS=Gallus gallus GN=RAD51A PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.306e-54 Identity = 87/171 (50.88%), Postives = 114/171 (66.67%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGG-FLSNPKKP 926 GIETG+ITE FGEFR+GKTQL HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+ VLDN+ YAR + +HQ LL +A M+E + LLIVDS AL+R D++GRGE + RQ + + ++++ VAV TNQ A G F ++PKKP Sbjct: 116 GIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKP 286 HSP 2 Score: 67.0106 bits (162), Expect = 1.306e-54 Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 145 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 402 Q+Q D EE+ F E I +L GINA DVKKL++AG +T + KK L IKG+SEAK +KI A K+V G+ T ++ Sbjct: 4 QVQFEASTDTSAEEESFGPEPISRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNIKGISEAKADKILAEAAKLVPMGFTTATE 91
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RAD51_CANFA (DNA repair protein RAD51 homolog 1 OS=Canis familiaris GN=RAD51 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.702e-54 Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGG-FLSNPKKP 926 GIETG+ITE FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+ VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGE + RQ + + ++++ VAV TNQ A G F ++PKKP Sbjct: 116 GIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKP 286 HSP 2 Score: 68.5514 bits (166), Expect = 1.702e-54 Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 145 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 402 Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L IKG+SEAK +KI A K+V G+ T ++ Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELISIKGISEAKADKILTEAAKLVPMGFTTATE 91
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RAD51_BOVIN (DNA repair protein RAD51 homolog 1 OS=Bos taurus GN=RAD51 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.702e-54 Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGG-FLSNPKKP 926 GIETG+ITE FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+ VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGE + RQ + + ++++ VAV TNQ A G F ++PKKP Sbjct: 116 GIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKP 286 HSP 2 Score: 68.5514 bits (166), Expect = 1.702e-54 Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 145 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 402 Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L IKG+SEAK +KI A K+V G+ T ++ Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILTEAAKLVPMGFTTATE 91
BLAST of DY260712 vs. ExPASy Swiss-Prot
Match: RAD51_MOUSE (DNA repair protein RAD51 homolog 1 OS=Mus musculus GN=Rad51 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.893e-54 Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 417 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGEPAERQQNWGKCSPR*QKISEGINVAV*RTNQFKADPGGGG-FLSNPKKP 926 GIETG+ITE FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+ VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGE + RQ + + ++++ VAV TNQ A G F ++PKKP Sbjct: 116 GIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKP 286 HSP 2 Score: 67.781 bits (164), Expect = 2.893e-54 Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 145 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 402 Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L IKG+SEAK +KI A K+V G+ T ++ Sbjct: 4 QMQLEASADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKILTEAAKLVPMGFTTATE 91 The following BLAST results are available for this feature:
BLAST of DY260712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260712 ID=DY260712; Name=DY260712; organism=Citrus clementina; type=EST; length=942bpback to top |