DY260760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC242_SACBA (Protein transport protein SEC24-2 OS=Saccharomyces bayanus GN=SEC242 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.705e-19 Identity = 60/205 (29.27%), Postives = 104/205 (50.73%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLP-EGPRTMVGIATFDSTIHFY-------NLKRALQQPLMLIVPDVEDVYTPLQSDIIVPGFRVPVNNLKIMLENISSTAQNHKLPRQPSGSLIQS 603 VRC RC++Y+NPF+ FI+QGRR+ C+ C ++ P + E+ +E++A KEY +R P PA + FL+DVS ++++G A + + Q + +P RT + I D+ IH++ N + + Q M+ + D+E+ + P + ++V +LK +NI S K+P+ +LI S Sbjct: 229 VRCRRCRSYMNPFITFIEQGRRWRCNFCRLANDVP--MQMDQTDPNDPKSRYDRNEIKCAVMEYMAPKEYTLRQPPPATYCFLVDVSQASIKSGLLATTINTLLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSDNNEGSTDQINMMDIADLEEPFLPRPNSMVV--------SLKACRQNIESLLT--KIPQIFQSNLITS 421
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC241_SACBA (Protein transport protein SEC24-1 OS=Saccharomyces bayanus GN=SEC241 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.960e-19 Identity = 47/131 (35.88%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLP-EGPRTMVGIATFDSTIHFY 402 VRC RC++Y+NPF+ FI+QGRR+ C++C F ++ P + NL E+ +E++A EY VR+P P+ + F++DVS NA++ G A + I + + LP RT V I D +H++ Sbjct: 162 VRCRRCRSYLNPFVAFIEQGRRWQCNICRFKNDVPFGFDQNL--QGAPINRYERNEIKHSVMEYLAPIEYSVREPPPSTYVFILDVSQNAVRNGLLATSARTILENLESLPNHDGRTSVSIICVDHALHYF 290
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SEC24_KLULA (Protein transport protein SEC24 OS=Kluyveromyces lactis GN=SEC24 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19 Identity = 61/226 (26.99%), Postives = 109/226 (48.23%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLP-EGPRTMVGIATFDSTIHFYN--LKRALQQPLMLIVPDVEDVYTPLQSDIIVPGFRVPVNNLKIMLENISSTAQNHKLPRQPSGSLIQSNL**ALNNECGQPSELLIMQICILKV 681 VRC RC+AY+NPF++ I+ G R+ C+ C + P+ N E V+FVA KEY VR P P+ + F++DVS +++ G A A + + + +P RT + I D ++H++ L M V D+++ + P + ++VP +N++ +L ++ Q + PR S ++S ALN Q +++++ + V Sbjct: 242 VRCRRCRAYLNPFVQVIENGLRWRCNFCNLANNFPQAIDMN-------GNRYERPEFNHSVVDFVAPKEYAVRPPPPSTYAFILDVSQASIKNGLLATAARTLLESLDTIPNHDERTRISIICVDQSLHYFRIPLDEEGDNIKMYDVADLDEPFLPSPTGLLVPLIEAR-SNIEKLLTSLPEIFQQNIQPRFALASALKS----ALNLIRAQGGKIIVVGATLANV 455
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SFB3_YEAST (SED5-binding protein 3 OS=Saccharomyces cerevisiae GN=SFB3 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.755e-16 Identity = 56/207 (27.05%), Postives = 99/207 (47.83%), Query Frame = 1 Query: 1 DMGPVRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETPRDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEYMV---RDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLPE-GPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDVEDVYTPLQSDIIV-PGFRVP-VNNLKIMLENISSTAQNHKLPRQPSGSLIQS 603 D P+RC RC+AY NP +F IC++C + P ++ + EL GTV+F+ Y ++ +P + FLIDVS+ A + G++ A + + + + P V I +D+ + F+NL+ L IV +++DV+ P + + V PG + +N+ I + ST + +P+ GS +Q+ Sbjct: 214 DGTPLRCRRCRAYANPKFQFTYDSS-VICNICRVKMQVPGEHFAPMGPNGQRSDLNEKSELLHGTVDFLVPSIYNAIQEKELLPLHYVFLIDVSLLANENGSSLAMVEGVRSCIEYISDFQPNCEVAIIVYDNKLRFFNLRPDLDNAQEYIVSELDDVFLPFYNGLFVKPGNSMKIINDTLIKISGYISTDKYSHVPQVCYGSALQA 419
BLAST of DY260760 vs. ExPASy Swiss-Prot
Match: SC242_SACCA (Protein transport protein SEC24-2 OS=Saccharomyces castellii GN=SEC242 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.002e-11 Identity = 49/199 (24.62%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 13 VRCSRCKAYINPFMKFIDQGRRFICSLCGFTDETP-RDYHCNLXXXXXXXXXXXXXELCRGTVEFVATKEY--MVRDPMPAVFFFLIDVSMNALQTGATAAACSAISQVVSDLP-EGPRTMVGIATFDSTIHFYNL----KRALQQPLMLIVPDVEDVYTPLQSDIIVPGFRVPVNNLKIMLENI-----SSTAQNHKL 570 +RC RC+ Y+NPF+K + ++ C+ CG + P H L EL +++F+ + Y V++ PAV+ F+IDVS+N ++ G + +A+ + +P +T++ + DS++H++++ + ++ M + D+++ + P + ++V NNL+ +L I S+T Q+ L Sbjct: 224 IRCRRCRGYLNPFVKILQVESKWRCNFCGCINGFPDGSEHFQL------PNLYNRNELTYSSMDFLPSSSYSQQVKEEPPAVYTFVIDVSINTIKNGYLFSVANALVNSLDLIPNHDNKTLISLICADSSLHYFSVPLDTEDGPKESSMFDISDLDEPFLPTSNSLLV-SLSQCRNNLEHLLLKIPEIFKSTTIQSFAL 415 The following BLAST results are available for this feature:
BLAST of DY260760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260760 ID=DY260760; Name=DY260760; organism=Citrus clementina; type=EST; length=980bpback to top |