DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.460e-70
Identity = 130/239 (54.39%), Postives = 176/239 (73.64%), Query Frame = 3
Query:   54 GSQFLKKNMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            G+ +  ++  TFLFTSESV EGHPDK+CDQISDAILDA L+QDP++KVACET  KT ++++ GEIT+KA V+Y+K+VR+T ++IG+     G D   C VL+ ++QQSP+IA GV  H+++  EEIGAGDQG MFGYATDET E MPL+ VLA +L  K+ E+R++    W RPD KTQVT EY    G+ VP RVHT+++S QH E ++ + + +++ E V+K VIP KY+D  TI H
Sbjct:   18 GNSYDMEDGATFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDFKTCNVLLALDQQSPEIAAGV--HVNRAEEEIGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVH 254          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 7.246e-70
Identity = 130/228 (57.02%), Postives = 170/228 (74.56%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            FLFTSESV+EGHPDK+CDQISDA+LDA L QDP +KVACET TKT ++M+ GEIT+KA V+Y+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H+ K   ++GAGDQG MFGYATDET E MPL+ +L+ +L  KL E+R++G   W+RPD KTQVT+EY +E GA VP+RVHTV+ISTQH   ++ +++  +L E VIK VIP   +D  T++H
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYH 231          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.134e-69
Identity = 136/233 (58.37%), Postives = 173/233 (74.25%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E  LFTSESV+EGHPDK+ DQISDAILD  L++DPDS+VA ET   T LV+VFGE++TKA VN ++IVRDT R IG+     G DADNC V+  I++QSPDIAQGV   L  R       ++IGAGDQG MFGYATDETPE+MPL+ VL+ +L  K+ ++RK+G   +LRPD K +VTVE Y+EN    P+RV TV++STQHD  V+ D+I  D+KE VI+ VIP +YLD++T
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKLMRKIAQLRKDGVISYLRPDAKAEVTVE-YDENDK--PLRVDTVVLSTQHDPEVSLDQIKKDIKEQVIEAVIPAEYLDDQT 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LACRD (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=metK PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.134e-69
Identity = 136/233 (58.37%), Postives = 173/233 (74.25%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E  LFTSESV+EGHPDK+ DQISDAILD  L++DPDS+VA ET   T LV+VFGE++TKA VN ++IVRDT R IG+     G DADNC V+  I++QSPDIAQGV   L  R       ++IGAGDQG MFGYATDETPE+MPL+ VL+ +L  K+ ++RK+G   +LRPD K +VTVE Y+EN    P+RV TV++STQHD  V+ D+I  D+KE VI+ VIP +YLD++T
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKLMRKIAQLRKDGVISYLRPDAKAEVTVE-YDENDK--PLRVDTVVLSTQHDPEVSLDQIKKDIKEQVIEAVIPAEYLDDQT 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.857e-68
Identity = 136/232 (58.62%), Postives = 163/232 (70.26%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILDA LE+DP+++VACET   T LV+V GEITT   V+  +IVRDT R IG+     G DAD C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +L EVRK    P+LRPDGKTQVT+E Y+ENG   PVRV T++ISTQH   + +D+I  D+KEHVIKP++P + LDE T
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKFGFDADTCAVLTAIDEQSPDIAMGVDQALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPLPISLAHRLSRRLAEVRKTDVLPYLRPDGKTQVTIE-YDENGK--PVRVDTIVISTQHHPEIEHDQIERDMKEHVIKPIVPAELLDENT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.973e-67
Identity = 134/232 (57.76%), Postives = 163/232 (70.26%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILDA LE+DP+++VACET   T LV+V GEITT   V+  KIVRDT R IG+     G DAD C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +L+EVRK    P+LRPDGKTQVTVE Y+ENG   PVR+ T+++S QH   +T ++I  D+KEHVIKP++P + +DE T
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDKALEAREGQMTDEEIEAIGAGDQGLMFGFACNETKELMPLPISLAHRLARRLSEVRKEAILPYLRPDGKTQVTVE-YDENGK--PVRIDTIVVSAQHHPEITQEQIERDIKEHVIKPIVPAELIDENT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.396e-67
Identity = 131/233 (56.22%), Postives = 162/233 (69.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+CDQISDA+LDA   +DP+++VACET   T LVMV GEITT   V+  KI R+T +NIG+     G D + C V+  I++QS DIA GV   L  R  E      +GAGDQG MFG+AT+ET EFMP    +A +L  +LTEVRKNGT P+LRPDGKTQVTVEY N+     PVR+  ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T ++
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRAKYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYENDK----PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYY 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.396e-67
Identity = 131/233 (56.22%), Postives = 162/233 (69.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+CDQISDA+LDA   +DP+++VACET   T LVMV GEITT   V+  KI R+T +NIG+     G D + C V+  I++QS DIA GV   L  R  E      +GAGDQG MFG+AT+ET EFMP    +A +L  +LTEVRKNGT P+LRPDGKTQVTVEY N+     PVR+  ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T ++
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRAKYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYENDK----PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYY 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.849e-66
Identity = 136/236 (57.63%), Postives = 161/236 (68.22%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            M   LFTSESV EGHPDK+CDQISD+ILDA LE+DP S+VACET   T LV+V GEI+T A V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +         E++GAGDQG MFG+A +ETPE MPL   LA +L  +LTEVRK G   +LRPDGKTQVTVEY         VRVHTVLIS QH ETV+ND+I  DL  HVIK VIP + LDE+T
Sbjct:    1 MARHLFTSESVTEGHPDKICDQISDSILDALLEKDPQSRVACETTVTTGLVLVAGEISTSAYVDIPKLVRETVREIGYTRAKYGFDCDTCAVITSIDEQSGDIAMGVDEGLESKTGEEIEEEIEKVGAGDQGIMFGFACNETPELMPLPISLAHKLSRRLTEVRKTGLVDYLRPDGKTQVTVEYEGSKA----VRVHTVLISAQHCETVSNDKIREDLINHVIKEVIPAELLDEET 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.849e-66
Identity = 134/232 (57.76%), Postives = 159/232 (68.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR--------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACE    T LV+V GEITTK  V+  KI RDT R IG+     G DAD C V+  I++QSPDIA GV   L  +         E IGAGDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++     PVRV TV++STQH   VT+ +I AD+ EHVIKPVIPE  LD+ T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTEDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKEGILPYLRPDGKTQVTVEYEDDK----PVRVDTVVVSTQHSPEVTHAQIEADVIEHVIKPVIPEGMLDKNT 231          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DROME1.460e-7054.39S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK5_CAEEL7.246e-7057.02Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_LACRJ6.134e-6958.37S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACRD6.134e-6958.37S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_GEOTN8.857e-6858.62S-adenosylmethionine synthetase OS=Geobacillus the... [more]
METK_GEOSW1.973e-6757.76S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]
METK_CLOPS4.396e-6756.22S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP14.396e-6756.22S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOD62.849e-6657.63S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK_ANATD2.849e-6657.76S-adenosylmethionine synthetase OS=Anaerocellum th... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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