DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOB1 (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.373e-65
Identity = 127/230 (55.22%), Postives = 163/230 (70.87%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.018e-65
Identity = 125/233 (53.65%), Postives = 162/233 (69.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSK------RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP+ +VACET   T +V+V GEITT   V+  KIVR+T   IG+     G D+D C VL  I +QSPDIA GV   L        + + IGAGDQG MFGYA +ET E+MP++  +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY +       +R+ T+++STQH   VT ++I  D+ EHVI  V+P ++LDE T ++
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILERDPNGRVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEDNKA----IRIDTIVVSTQHGPEVTREQIEKDIFEHVISKVVPVEFLDENTNYY 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.018e-65
Identity = 126/230 (54.78%), Postives = 163/230 (70.87%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   +  ++I  D+KEHVIK ++P + LDE T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEIYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.197e-64
Identity = 129/233 (55.36%), Postives = 162/233 (69.53%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E  LFTSESV+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV+VFGE++TKA V+ +K+VRDT ++IG+V    G D DNC VLV +++QSPDIAQGV   L  R       ++IGAGDQG MFGYA +ETPE MPL   L+ +L  K+  +RK+GT  WLRPD K QVTVEY  +N    P R+ TV++STQHD  V  D I   + + VIK V+P   LD++T
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAALRKDGTIKWLRPDAKAQVTVEYDEDN---QPKRIDTVVLSTQHDPDVDLDTIRQTVIDQVIKAVLPADLLDDQT 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LACBA (S-adenosylmethionine synthetase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metK PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.197e-64
Identity = 131/233 (56.22%), Postives = 160/233 (68.67%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E  LFTSESV+EGHPDK+ DQISDAILDA L QDPDS+VACET   T LV+VFGEI+TKA V+ +K+VR T + IG+     G D DNC VLV I++QSPDIAQGV   L  R       ++IGAGDQG MFGYA +ETPE MPL   L+  L  ++  +RK     +LRPD K +VTVEY + +    P+RV TV++STQHD  VT D I  D+ E VIKP IP   LD++T
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDALLAQDPDSRVACETSVTTGLVLVFGEISTKAYVDIQKVVRQTIKEIGYTDGQYGFDGDNCAVLVAIDEQSPDIAQGVDDSLETREGDADPLDQIGAGDQGLMFGYAVNETPELMPLPIELSHALMRRIAMLRKQAVLDYLRPDAKAEVTVEYDDND---QPLRVDTVVLSTQHDPDVTLDRIRQDVIEQVIKPTIPADLLDDQT 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.197e-64
Identity = 131/234 (55.98%), Postives = 167/234 (71.37%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE--------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISDA+LDA LEQDP S+VACET   T LV+V GEITT   V+ +KIVRDT + IG+     G DAD C V+V +++QS DIA GV   L  +  E        IGAGDQG MFGYA++ET E MP    LA +L  +L++VRK+GT  +LRPDGK+QVTVE YNE G   PV ++ V++STQHD  VT ++I  D+K++V +PV+P++ +DEKT F
Sbjct:    6 LFTSESVTEGHPDKICDQISDAVLDALLEQDPMSRVACETAITTGLVLVMGEITTSGYVDIQKIVRDTVKEIGYDRAKYGFDADTCGVIVALDEQSKDIALGVDKALEAKQNEMTDEAIEAIGAGDQGMMFGYASNETEELMPYPISLAHKLTKQLSKVRKDGTLSYLRPDGKSQVTVE-YNEEGK--PVHLNAVVLSTQHDPDVTQEQIHEDIKKYVFEPVLPKEMVDEKTKF 236          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.197e-64
Identity = 127/230 (55.22%), Postives = 163/230 (70.87%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAIGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.197e-64
Identity = 127/230 (55.22%), Postives = 161/230 (70.00%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILDA L +DP+++VACETCT T LVMV GEI+T   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +       E +GAGDQG MFG+AT+ET  +MPL   +A +L  +LTEVRK+GT  +LRPDGKTQVTVEY N      P R+ T++ISTQH E V+ ++I  D+KE+VI  V+P + LD +T
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILTKDPNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLEKIEKDIKEYVINAVVPTELLDSET 229          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.197e-64
Identity = 132/232 (56.90%), Postives = 163/232 (70.26%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILD  L++DP+++VACET   T LV+V GEITT   V+   +VR T + IG+     G DA+ C VL  I++QS DIAQGV   L  R         E IGAGDQG MFG+AT+ET E MPL   L+ +L  +LTEVRKNGT  +LRPDGKTQVT+E Y+EN    PVRV T+++STQH   VT ++I ADLKEHVI+ V+P   +DE+T
Sbjct:    9 LFTSESVTEGHPDKICDQISDAILDEILKKDPNARVACETSVTTGLVLVAGEITTNTYVDIPSVVRQTIKGIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGQMTDAEIEAIGAGDQGLMFGFATNETEELMPLPISLSHKLSRRLTEVRKNGTLGYLRPDGKTQVTIE-YDEND--TPVRVDTIVLSTQHAPEVTLEQIQADLKEHVIEAVVPSALIDEET 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.197e-64
Identity = 131/232 (56.47%), Postives = 163/232 (70.26%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISD+ILD  L++DP+++VACET   T LV+V GEITT   V+  K VRDT + IG+     G DA+ C VL  I++QS DIAQGV   L  R         + IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVEY ++N    PVR+ TV+ISTQH   VT ++I +DLKEHVI PV+P + +DE+T
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRDTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGTMTEEELDAIGAGDQGLMFGFANNETEELMPLPISLAHKLSLRLTEVRKDQTLAYLRPDGKTQVTVEYDDQN---KPVRIDTVVISTQHAPEVTLEQIQSDLKEHVISPVVPSELIDEQT 235          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOB15.373e-6555.22S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOTE7.018e-6553.65S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_CLOBJ7.018e-6554.78S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_LACPL1.197e-6455.36S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_LACBA1.197e-6456.22S-adenosylmethionine synthetase OS=Lactobacillus b... [more]
METK_CLOPH1.197e-6455.98S-adenosylmethionine synthetase OS=Clostridium phy... [more]
METK_CLOBK1.197e-6455.22S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBB1.197e-6455.22S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_BACSK1.197e-6456.90S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_BACP21.197e-6456.47S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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