DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.563e-64
Identity = 131/232 (56.47%), Postives = 161/232 (69.40%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH-------GHLS-KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDA+LDA  E+DP ++VACET   T +VMV GEITT   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV        G +S ++ + IGAGDQG MFG+A DETPE MP+  +LA +L  KL+EVRKNG   +LRPDGK+QVTVEY  +     PVRV TV+ISTQH   V++D I  D+ EHVI PVIP + LDE T
Sbjct:    5 LFTSESVTEGHPDKICDQISDAVLDAIYEKDPQARVACETAVTTGMVMVMGEITTNCYVDIPKVVRNTIREIGYDRAKYGFDCDTCAVMTSIDEQSSDIAMGVDKALEAKVGEMSEEQVQAIGAGDQGMMFGFACDETPELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEYDGDK----PVRVDTVVISTQHGADVSHDTIEKDIMEHVIIPVIPRELLDEGT 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOBA (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=metK PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.549e-64
Identity = 127/230 (55.22%), Postives = 159/230 (69.13%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILDA L +D +++VACETCT T LVMV GEI+T   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +       E +GAGDQG MFG+AT+ET  +MPL   +A +L  +LTEVRK+GT  +LRPDGKTQVTVEY N      P R+ T++ISTQH E V+ + I  D+KEHVI  V+P + LD +T
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILAKDSNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLETIEKDIKEHVINAVVPAELLDAET 229          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THESQ (S-adenosylmethionine synthetase OS=Thermotoga sp. (strain RQ2) GN=metK PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.941e-64
Identity = 131/231 (56.71%), Postives = 156/231 (67.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEK 758
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T LV++ GE+TT+A V    I R T   IG+     G D + C VL  I  QSPDIA GV   L  +         E +GAGDQG MFGYAT+ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + EHVI PVIPE+Y D+K
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDK 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THEP1 (S-adenosylmethionine synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metK PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.941e-64
Identity = 131/231 (56.71%), Postives = 156/231 (67.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEK 758
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T LV++ GE+TT+A V    I R T   IG+     G D + C VL  I  QSPDIA GV   L  +         E +GAGDQG MFGYAT+ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + EHVI PVIPE+Y D+K
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDK 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THEMA (S-adenosylmethionine synthetase OS=Thermotoga maritima GN=metK PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.941e-64
Identity = 131/231 (56.71%), Postives = 156/231 (67.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEK 758
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T LV++ GE+TT+A V    I R T   IG+     G D + C VL  I  QSPDIA GV   L  +         E +GAGDQG MFGYAT+ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + EHVI PVIPE+Y D+K
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDK 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.759e-64
Identity = 129/232 (55.60%), Postives = 159/232 (68.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV-------HGHLS-KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILD  L++DP ++VACET   T LV+V GEITT+  V+  K+VR     IG+     G DAD C V+  I++QSPDIA GV        G LS    E IGAGDQG MFG+A DET E MP+  +LA +L  +L EVRKNGT  +LRPDGKTQVTVEY ++     PVRV +V++S QH   + +D I  D+ EHVIKP+IPE  +D+KT
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTQCYVDIPKVVRKVVEEIGYTRAKFGFDADTCAVITSIDEQSPDIALGVDKALEAKRGELSDSEIEAIGAGDQGLMFGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEDDK----PVRVDSVVVSAQHAPEIDHDTIERDIIEHVIKPIIPENMIDDKT 231          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LACS1 (S-adenosylmethionine synthetase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.759e-64
Identity = 125/233 (53.65%), Postives = 164/233 (70.39%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E  LFTSESV+EGHPDK+ DQISD+ILDA LEQDP+++VA ET   T LV+V GE++T A+++ +K+VR+T + IG+ +   G D DNC V+  I++QSPDIA GV   L  +       ++IGAGDQG MFGYA +ETPE MPL   L+  L  K+ EVRKNGT  +L PD K QVTVEY + N    P+R+ TV++STQHDE ++ D+I  D+ + VI  VIP+KYLD  T
Sbjct:    3 EKHLFTSESVSEGHPDKIADQISDSILDAMLEQDPEARVAVETTVTTGLVVVVGEVSTTAHIDIQKVVRETIKEIGYKNGKYGFDGDNCAVITAIDEQSPDIALGVDNSLEVKNGDVDPLDQIGAGDQGMMFGYAINETPELMPLPISLSHHLMKKVAEVRKNGTLAYLGPDAKAQVTVEYDDNN---QPLRIDTVVLSTQHDENISLDQIRKDVMDQVITKVIPDKYLDSNT 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.759e-64
Identity = 135/234 (57.69%), Postives = 162/234 (69.23%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACCZ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ZK / E33L) GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.759e-64
Identity = 135/234 (57.69%), Postives = 162/234 (69.23%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACCQ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain Q1) GN=metK PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.759e-64
Identity = 135/234 (57.69%), Postives = 162/234 (69.23%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOCE1.563e-6456.47S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_CLOBA4.549e-6455.22S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_THESQ5.941e-6456.71S-adenosylmethionine synthetase OS=Thermotoga sp. ... [more]
METK_THEP15.941e-6456.71S-adenosylmethionine synthetase OS=Thermotoga petr... [more]
METK_THEMA5.941e-6456.71S-adenosylmethionine synthetase OS=Thermotoga mari... [more]
METK_THEP37.759e-6455.60S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_LACS17.759e-6453.65S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_BACHK7.759e-6457.69S-adenosylmethionine synthetase OS=Bacillus thurin... [more]
METK_BACCZ7.759e-6457.69S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACCQ7.759e-6457.69S-adenosylmethionine synthetase OS=Bacillus cereus... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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