DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THEAB (S-adenosylmethionine synthetase OS=Thermosipho africanus (strain TCF52B) GN=metK PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.949e-63
Identity = 133/232 (57.33%), Postives = 161/232 (69.40%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP---------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEK 758
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T + +V GE+TT+A V+ + IVR T  +IG+     G D + C VL  I  QSPDIA GV   L  +          E++GAGDQG MFGYAT+ET E+MPL  +L+ +L  KL+EVRKNGT P+LRPDGKTQVT+E Y+EN    PVRV TVLISTQH+  VT  EI   L +HVI P+IPE+  D+K
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDAMLEQDPKSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTILDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVDKALEAKEGELIAEDELEQVGAGDQGMMFGYATNETKEYMPLPIMLSHKLAMKLSEVRKNGTLPFLRPDGKTQVTIE-YDENDK--PVRVDTVLISTQHEPDVTISEIKEALIKHVIDPIIPEELRDDK 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACCR (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metK PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.949e-63
Identity = 134/234 (57.26%), Postives = 162/234 (69.23%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKF 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACC4 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain B4264) GN=metK PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.949e-63
Identity = 134/234 (57.26%), Postives = 162/234 (69.23%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKF 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACC2 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain G9842) GN=metK PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.949e-63
Identity = 134/234 (57.26%), Postives = 162/234 (69.23%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKF 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACC1 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 10987) GN=metK PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.949e-63
Identity = 134/234 (57.26%), Postives = 162/234 (69.23%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THENN (S-adenosylmethionine synthetase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.851e-63
Identity = 131/231 (56.71%), Postives = 155/231 (67.10%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEK 758
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T LV+V GE+TT+A V    IVR T   IG+     G D + C VL  I  QSPDIA GV   L  +         E +GAGDQG MFGYAT+ETPE+MPL   LA +L  +L EVRK G  P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + EHVI PVIPE+Y D+K
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDAMLEQDPKSRVAVETLVTTGLVIVAGEVTTRAYVEIPDIVRKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKSGEEVADELEALGAGDQGIMFGYATNETPEYMPLPITLAHRLAMRLAEVRKKGILPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEEYRDDK 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACWK (S-adenosylmethionine synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metK PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.851e-63
Identity = 134/234 (57.26%), Postives = 162/234 (69.23%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            LFTSESV EGHPDK+CDQISD+ILDA L +D +++VACET   T LV+V GEITT   V+  KIVR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILAKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKF 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACLD (S-adenosylmethionine synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metK PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.029e-63
Identity = 126/232 (54.31%), Postives = 159/232 (68.53%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISD+ILD  L++DP+++VACET   T LV+V GEITT   V+  K VR+T + IG+     G DA+ C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +LTEVRK    P+LRPDGKTQVTVEY   N    P+R+ T++ISTQH   ++ ++I  +LKEHVI PV+P++ +DE T
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSPDIAMGVDQALEAREGAMSDAEIEAIGAGDQGLMFGFACNETKELMPLPISLAHKLSRRLTEVRKEEILPYLRPDGKTQVTVEYDENN---KPIRIDTIVISTQHHPEISLEQIQRNLKEHVINPVVPKELIDENT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.569e-63
Identity = 127/231 (54.98%), Postives = 163/231 (70.56%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E  LFTSESV+EGHPDK+ DQ+SDAILDA LE+DP ++VACET   T LV+VFGEI+T A V+ +KIVR T ++IG+     G D +   VLV I++QSPDIAQGV   L  R     ++IGAGDQG MFG+A DETPE MPL   L+ +L  +L E+RK    P+LRPD K+QVTVEY ++     P RV T++ISTQHD+  T ++I  D+KE VI  VIP + LD++T
Sbjct:    3 ERHLFTSESVSEGHPDKVADQVSDAILDAILEKDPMARVACETSVTTGLVLVFGEISTTAYVDIQKIVRQTVKDIGYTRAKYGFDGETVAVLVAIDEQSPDIAQGVDAALEVRDQDEKDDIGAGDQGLMFGFAVDETPELMPLPIALSHRLVRRLAELRKEKVLPYLRPDAKSQVTVEYDDQG---QPQRVDTIVISTQHDDETTLEQIEKDIKEQVINEVIPHELLDDET 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CHLSY (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 8.579e-63
Identity = 132/237 (55.70%), Postives = 160/237 (67.51%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEIT-TKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH-------GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            N   F FTSESV+EGHPDK+CDQISDAILDA L  DP ++VA ET T T L++V GE+T  +  +  E+IVR T + IG+ S + G DAD C V+V I  QSPDIA GV        G ++   E +GAGDQG MFG+A DETPE MP S  LA +L  +L  VRK+GT P+LRPD K+QVTVEY        PVRV TVLIS+QH   +T D+I ADL EHVIK  IPE +LD +T
Sbjct:    7 NSPRFYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAHRLIRRLERVRKDGTLPYLRPDAKSQVTVEY----SFGKPVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQT 239          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_THEAB2.949e-6357.33S-adenosylmethionine synthetase OS=Thermosipho afr... [more]
METK_BACCR2.949e-6357.26S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC42.949e-6357.26S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC22.949e-6357.26S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC12.949e-6357.26S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_THENN3.851e-6356.71S-adenosylmethionine synthetase OS=Thermotoga neap... [more]
METK_BACWK3.851e-6357.26S-adenosylmethionine synthetase OS=Bacillus weihen... [more]
METK_BACLD5.029e-6354.31S-adenosylmethionine synthetase OS=Bacillus lichen... [more]
METK_ENTFA6.569e-6354.98S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_CHLSY8.579e-6355.70S-adenosylmethionine synthetase OS=Chloroflexus au... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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