DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CHLAA (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 8.579e-63
Identity = 132/237 (55.70%), Postives = 160/237 (67.51%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEIT-TKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH-------GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            N   F FTSESV+EGHPDK+CDQISDAILDA L  DP ++VA ET T T L++V GE+T  +  +  E+IVR T + IG+ S + G DAD C V+V I  QSPDIA GV        G ++   E +GAGDQG MFG+A DETPE MP S  LA +L  +L  VRK+GT P+LRPD K+QVTVEY        PVRV TVLIS+QH   +T D+I ADL EHVIK  IPE +LD +T
Sbjct:    7 NSPRFYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAHRLIRRLERVRKDGTLPYLRPDAKSQVTVEY----SFGKPVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQT 239          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACA2 (S-adenosylmethionine synthetase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metK PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.120e-62
Identity = 127/232 (54.74%), Postives = 157/232 (67.67%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISD+ILD  L+ DP+++VACET   T LV+V GEITT   V+  K VR+T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFGYA +ET E MPL   LA +L  +L+EVRK    P+LRPDGKTQVTVEY   N    PVR+  ++ISTQH   +T ++I  +LKEHVI PV+PE+ +DE+T
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKNDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDAEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENN---KPVRIDAIVISTQHHPEITLEQIQRNLKEHVINPVVPEELIDEET 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THELT (S-adenosylmethionine synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=metK PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.911e-62
Identity = 128/227 (56.39%), Postives = 158/227 (69.60%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKY 746
            LFTSESV EGHPDK+ DQISDAILDA +EQDPD++VA ET   T L +V GE+TT+A V+ + IVR T  +IG+     G D + C V+  I  QSPDIA GV+  L  +         ++IGAGDQG MFGYAT+ETPEFMPL  VLA QL  +L++VRK    P+LRPDGKTQVTVEY ++     P+R+ T+LIS QHD  VT +E+   L EHVIKP IPE+Y
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDALIEQDPDARVAVETLVTTGLAVVAGEVTTEAYVDIQDIVRRTILDIGYTRAKYGFDGETCGVVTSIHSQSPDIALGVNKALEAKEKNDDGDEFDKIGAGDQGMMFGYATNETPEFMPLPIVLAHQLAMRLSKVRKEKIVPFLRPDGKTQVTVEYSDDG---KPMRIDTILISAQHDPNVTINELKEVLLEHVIKPTIPEQY 227          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BACSU (S-adenosylmethionine synthetase OS=Bacillus subtilis GN=metK PE=3 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.496e-62
Identity = 126/232 (54.31%), Postives = 157/232 (67.67%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISD+ILD  L++DP+++VACET   T LV+V GEITT   V+  K VR T + IG+     G DA+ C VL  I++QS DIA GV   L  R         E IGAGDQG MFGYA +ET E MPL   LA +L  +L+EVRK    P+LRPDGKTQVTVEY   N    PVR+  ++ISTQH   +T ++I  ++KEHVI PV+PE+ +DE+T
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRQTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDEEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENN---KPVRIDAIVISTQHHPEITLEQIQRNIKEHVINPVVPEELIDEET 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LISIN (S-adenosylmethionine synthetase OS=Listeria innocua GN=metK PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.260e-62
Identity = 128/232 (55.17%), Postives = 154/232 (66.38%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  H+   VI   +LDE T
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGSEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDLHTHLFPEVIDASFLDENT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LACH4 (S-adenosylmethionine synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=metK PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.260e-62
Identity = 132/238 (55.46%), Postives = 160/238 (67.23%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE--------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            ME  LFTSESV+EGHPDK+ DQISDAILDA LE+DP+S VACET   T +V VFGEI+T A V+ + +VR T   IG+   ++G D +NC V+V I++QSPDIA GV   L  R  E        IGAGDQG MFG+A  ETPE MPL   LA +L  ++  +RK+ T  WLRPD K QVTVEY   N    P+RV TV+ISTQ D  V+N EI   + + VIK VIP +YLDEKT F
Sbjct:    1 MERRLFTSESVSEGHPDKVADQISDAILDAMLEKDPNSHVACETIVTTGMVFVFGEISTNAYVDIQDVVRKTILRIGYDRPELGFDGNNCAVMVDIDEQSPDIAGGVDHSLETRENESDQDELDQIGAGDQGLMFGFAIKETPELMPLPISLAHRLMRRVASLRKDHTLDWLRPDAKAQVTVEYDENNN---PLRVDTVVISTQTDAEVSNKEIRRAMIDLVIKEVIPARYLDEKTKF 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DEHSC (S-adenosylmethionine synthetase OS=Dehalococcoides sp. (strain CBDB1) GN=metK PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.260e-62
Identity = 122/238 (51.26%), Postives = 157/238 (65.97%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            N   +LFTSESV EGHPDK+CDQISDA+LDA + +DP + VACET     LV+V GEITT   V   ++VR   ++IG++  + G D   C VL  I +QSPDIA GV+     +  ++      GAGDQG MFGYA  ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGK+QVTVEY+N        R+ +V+I  QHD  +T ++I AD+   VIKP+IP   LDEKT ++
Sbjct:    7 NSSKYLFTSESVTEGHPDKICDQISDAVLDAIIAKDPTAHVACETAVTNGLVVVMGEITTSCYVEIPELVRGVIKDIGYIKPEYGFDDRTCGVLTSINRQSPDIALGVNKSQEAKSGQVDELDLTGAGDQGMMFGYACTETPEYMPLPISLAHRLSKRLAEVRKNGTLPYLRPDGKSQVTVEYHNGKAK----RISSVVIGAQHDPDITTEKIQADIIREVIKPIIPTNLLDEKTEYY 240          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THETN (S-adenosylmethionine synthetase OS=Thermoanaerobacter tengcongensis GN=metK PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.258e-62
Identity = 125/232 (53.88%), Postives = 156/232 (67.24%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILD  L++DP ++VACET   T LV+V GEITT+  V+  +I RD  R+IG+     G DAD C V+  I++QSPDIA GV+  L  R         E IGAGDQG M G+A DET E MP+  +LA +L  +L EVRKNGT  +LRPDGKTQVTVEY  +     PVRV +V++S QH   V +D I  D+ EHV+  +IPE  +D+ T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTECYVDIPRIARDVIRDIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVNKALEARRGELTDAEIEAIGAGDQGLMIGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEEDR----PVRVDSVVVSAQHAPEVDHDTIEKDIIEHVVNVIIPENMMDKNT 231          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.262e-62
Identity = 121/236 (51.27%), Postives = 162/236 (68.64%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV---HGHLSKRPEEI--GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            ++ + F+SESV EGHPDK+CD +SDA+LD CL+QDP+S+VACET  KT ++M+ GEITTKA ++Y+KI RDT R IG+ S D+G DAD C V+  I +QSPDI  GV    G  +     +  GAGDQG MFGYA +ET  FMPL+  LA +L  +LT+VRK+    +LRPDGK+QVTVEY +   A    R+  V+ISTQH   V + +I AD+K++VI  + P   LD  T ++
Sbjct:    4 IKNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKDKVVDYLRPDGKSQVTVEYKDGKAA----RIEAVVISTQHAAGVDHKQIEADIKKYVINEICPANMLDSNTKYY 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PEDPA (S-adenosylmethionine synthetase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=metK PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.485e-62
Identity = 125/236 (52.97%), Postives = 163/236 (69.07%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            E  LFTSESV+EGHPDK+ DQISD+ILD  L+ DPD++VACET   T LV+V GEI+T A ++ +K+VR T ++IG+V  + G D +NC V+V I++QSPDIAQGV   L  R        +IGAGDQG MFGYAT+ET E MPL  +L+  L  ++ ++RK     +LRPD K +VTVEY + +    PVRV TV++STQHD  VT ++I  D+ E VIK VIP   LDE T F+
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDSILDELLKNDPDARVACETTVTTGLVVVVGEISTTAYIDIQKVVRKTIKDIGYVGGEYGFDGENCAVIVAIDEQSPDIAQGVDDSLETREGHEDRLNQIGAGDQGLMFGYATNETEELMPLPIMLSHHLMQRIAKLRKEQVISYLRPDAKAEVTVEYDDNDH---PVRVDTVVLSTQHDPDVTLEQIRQDVIEQVIKAVIPATLLDENTNFY 235          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CHLAA8.579e-6355.70S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_BACA21.120e-6254.74S-adenosylmethionine synthetase OS=Bacillus amylol... [more]
METK_THELT1.911e-6256.39S-adenosylmethionine synthetase OS=Thermotoga lett... [more]
METK_BACSU2.496e-6254.31S-adenosylmethionine synthetase OS=Bacillus subtil... [more]
METK_LISIN3.260e-6255.17S-adenosylmethionine synthetase OS=Listeria innocu... [more]
METK_LACH43.260e-6255.46S-adenosylmethionine synthetase OS=Lactobacillus h... [more]
METK_DEHSC3.260e-6251.26S-adenosylmethionine synthetase OS=Dehalococcoides... [more]
METK_THETN4.258e-6253.88S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_BRAHW7.262e-6251.27S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_PEDPA9.485e-6252.97S-adenosylmethionine synthetase OS=Pediococcus pen... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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