DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DEHSB (S-adenosylmethionine synthetase OS=Dehalococcoides sp. (strain BAV1) GN=metK PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.485e-62
Identity = 121/238 (50.84%), Postives = 157/238 (65.97%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            N   +LFTSESV EGHPDK+CDQISDA+LDA + +DP + VACET     LV+V GEITT   V   ++VR   ++IG++  + G D   C VL  I +QSPDIA GV+     +  ++      GAGDQG MFGYA  ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGK+QVTVEY+N        R+ +V+I  QHD  +T ++I AD+  +VIKP+IP   LDE T ++
Sbjct:    7 NSSKYLFTSESVTEGHPDKICDQISDAVLDAIIAKDPTAHVACETAVTNGLVVVMGEITTSCYVEIPELVRGVIKDIGYIKPEYGFDDRTCGVLTSINRQSPDIALGVNKSQEAKSGQVDELDLTGAGDQGMMFGYACTETPEYMPLPISLAHRLSKRLAEVRKNGTLPYLRPDGKSQVTVEYHNGKAK----RISSVVIGAQHDPDITTEKIQADIIRNVIKPIIPTNLLDENTEYY 240          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ALKOO (S-adenosylmethionine synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=metK PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.239e-61
Identity = 128/231 (55.41%), Postives = 155/231 (67.10%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILDA LE+DP ++VACET   T LV+V GEITTK  V+  KIVR T   IG+     G D+D C VL  I +QS DIA GV   L  +        E IGAGDQG MFG+A +ETPE MPL   LA +L  +L++VRK+GT  +LRPDGKTQVTVEY  +     PVRV T++ISTQH   V    I  D+ EHV++ ++P + LDE T
Sbjct:    5 LFTSESVTEGHPDKMCDQISDAILDAILEKDPAARVACETSVSTGLVLVAGEITTKCYVDIPKIVRKTIEEIGYTRAKYGFDSDTCAVLTAINEQSADIALGVDEALESKKGEHRDELEAIGAGDQGIMFGFACNETPELMPLPISLAHKLAKRLSDVRKDGTIGYLRPDGKTQVTVEYDGDK----PVRVDTIVISTQHGPEVDAATIEKDMIEHVVQKIVPAELLDENT 231          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.618e-61
Identity = 128/232 (55.17%), Postives = 154/232 (66.38%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T +EIA DL  ++   VI   +LDE T
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGSEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTKKLDYLRPDAKTQVTVEYDELN---QPVRIDTIVVSTQHHPDITQEEIAKDLHTYLFPEVIDPSFLDEDT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLOAB (S-adenosylmethionine synthetase OS=Clostridium acetobutylicum GN=metK PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.618e-61
Identity = 125/233 (53.65%), Postives = 157/233 (67.38%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+CDQISDAILDA LE+DP+ +VACET   T +V V GEI+T   V+  KIVR T R IG+     G D D C V+  I++QS DIA GV   L  +  E      +GAGDQG MFGYAT+ET EFMP+   LA +L  +L EVRK+GT  +LRPDGKTQVT+EY ++     PVRV  ++ISTQH   + +++I  DL E V+K VI  + LDE T ++
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDAILEKDPNGRVACETTVTTGIVNVMGEISTNCYVDIPKIVRKTVREIGYTRAKYGFDCDTCAVVTSIDEQSADIAMGVDEALESKKGEMDKIDAVGAGDQGMMFGYATNETKEFMPMPIALAHRLSRRLAEVRKDGTLDYLRPDGKTQVTIEYEDDK----PVRVDAIVISTQHGPEIGHEQIEKDLIEKVVKYVISPELLDENTKYY 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.113e-61
Identity = 123/228 (53.95%), Postives = 159/228 (69.74%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            M T LFTSESV+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV GEITTKA V+ E+I R T R IG+ S D+G DA++C V+  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  +VRKNGT PWLRPD K+Q+T +Y N N     V +  V++STQH E ++  ++   + E +IKP++P ++L+E+T
Sbjct:    1 MTTHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAQVRKNGTLPWLRPDAKSQITFQYDNNN----IVGIDAVVLSTQHAEDISQKDLHEAVMEEIIKPILPTEWLNEQT 221          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LISMO (S-adenosylmethionine synthetase OS=Listeria monocytogenes GN=metK PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.113e-61
Identity = 127/232 (54.74%), Postives = 154/232 (66.38%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  ++   VI   +LDE T
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGNEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LISMH (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=metK PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.113e-61
Identity = 127/232 (54.74%), Postives = 154/232 (66.38%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  ++   VI   +LDE T
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LISMF (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metK PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.113e-61
Identity = 127/232 (54.74%), Postives = 154/232 (66.38%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  ++   VI   +LDE T
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LISMC (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metK PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.113e-61
Identity = 127/232 (54.74%), Postives = 154/232 (66.38%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  ++   VI   +LDE T
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDT 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BIFLI (S-adenosylmethionine synthetase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metK PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.760e-61
Identity = 128/226 (56.64%), Postives = 156/226 (69.03%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV---------HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 740
            L ++ESV EGHPDK+CDQISDAILD  L QDP S VA ET   T + +VFGE+T+K   + +  VR+T RNIG+ S +VGLDAD+C V+V I +QS +I QGV              +R E  GAGDQG MFGYATDETP  MPL   LA +L  +LTEVRK+G  P LRPDGKTQVT+EY + +    PVR+ TVLISTQHD  VT D +A +LK+HVI PV+ E
Sbjct:    7 LISAESVTEGHPDKVCDQISDAILDDLLVQDPSSHVAVETSAATGVFLVFGEVTSKGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGDQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIEYDDND---KPVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDE 229          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DEHSB9.485e-6250.84S-adenosylmethionine synthetase OS=Dehalococcoides... [more]
METK_ALKOO1.239e-6155.41S-adenosylmethionine synthetase OS=Alkaliphilus or... [more]
METK_LISW61.618e-6155.17S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_CLOAB1.618e-6153.65S-adenosylmethionine synthetase OS=Clostridium ace... [more]
METK_PROMH2.113e-6153.95S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_LISMO2.113e-6154.74S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMH2.113e-6154.74S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMF2.113e-6154.74S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMC2.113e-6154.74S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_BIFLI2.760e-6156.64S-adenosylmethionine synthetase OS=Bifidobacterium... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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