DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.604e-61
Identity = 123/231 (53.25%), Postives = 158/231 (68.40%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQG------VHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            +LFTSESV EGHPDK+ DQISDA+LDA L  DP ++VACET   T LV+V GEITT A V+   +VRD  R+IG+     G D   C V+  I+ QSPDIAQG      V G ++++  EIGAGDQG MFG+A DETPE MPL   LA +L  +L +VRKNGT P+LRPDGKTQVT+EY  E+G   P R+ T++IS QHD   T ++I  D+ ++VI  V+    +D++T
Sbjct:    8 YLFTSESVTEGHPDKMADQISDAVLDAILALDPRARVACETLLTTGLVVVTGEITTHAYVDIPNLVRDVVRDIGYTRAKYGFDGSTCGVMTAIDPQSPDIAQGVDVAIEVRGEVNEKELEIGAGDQGMMFGFACDETPELMPLPISLAHRLARRLAQVRKNGTLPYLRPDGKTQVTIEY--EDGR--PKRIDTIVISAQHDPDTTQEQIRKDVIDYVILDVVDRNLIDDRT 234          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LACAC (S-adenosylmethionine synthetase OS=Lactobacillus acidophilus GN=metK PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.604e-61
Identity = 130/238 (54.62%), Postives = 163/238 (68.49%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            ME  LFTSESV+EGHPDK+ DQISDAILDA L++DP+S VACET   T +V VFGEI+T A V+ + +VR T   IG+   ++G D +NC V+V I++QSPDIA GV   L  R         ++IGAGDQG MFG+A  ETPE MPL   L+ +L  ++  +RK+ T  WLRPD K QVTVE Y+ENG   P+ V TV+ISTQ D  V+N+EI   + + VIK VIP KYLDE T F
Sbjct:    1 MEKRLFTSESVSEGHPDKVADQISDAILDAMLKKDPNSHVACETIVTTGMVFVFGEISTSAYVDIQDVVRKTILKIGYDRPELGFDGNNCAVMVDIDEQSPDIADGVDHSLETRENKSDNDELDQIGAGDQGLMFGFAIKETPELMPLPISLSHRLMRRVASLRKDHTLEWLRPDAKAQVTVE-YDENGK--PLCVDTVVISTQTDAEVSNEEICRAMIDLVIKEVIPAKYLDENTKF 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THEM4 (S-adenosylmethionine synthetase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=metK PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.707e-61
Identity = 131/231 (56.71%), Postives = 157/231 (67.97%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE---------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 755
            LFTSESV EGHPDK+ DQISDAILDA LEQDP S+VA ET   T + +V GE+TT+A V+ + IVR T   IG+     G D + C VL  I  QSPDIA GV   L  +  E         +GAGDQG MFGYAT+ET E MPL  +LA +L  KL+E+RK+GT P+LRPDGKTQVTVE Y+EN    PVRV TVLISTQH+  VT  EI   L ++VI P+IPE+  D+
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDAMLEQDPRSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTIMEIGYTRAKYGFDGETCAVLSSIHSQSPDIAMGVDKALEAKEGELNAQDDLELVGAGDQGMMFGYATNETKELMPLPIMLAHKLALKLSEIRKSGTVPFLRPDGKTQVTVE-YDENDR--PVRVDTVLISTQHEPNVTIAEIKEALVKYVIDPIIPEELRDD 231          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LACJO (S-adenosylmethionine synthetase OS=Lactobacillus johnsonii GN=metK PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.707e-61
Identity = 128/237 (54.01%), Postives = 159/237 (67.09%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DPD +VACET   T LV+V GEI+T A V+ + +VR T   IG+   ++G D +NC +LV I++QS DIA GV+  L  R         ++IGAGDQG MFG+A  ETPE MPL   LA  L  ++  +RK G   WLRPD K QVTVEY +EN    P R+ TV+ISTQ D TV+NDEI   + + VIK VIP +YLD+ T F
Sbjct:    4 EKRLFTSESVSEGHPDKVADQISDAILDAILAKDPDGRVACETTVTTGLVLVVGEISTSAYVDIQSVVRKTILEIGYNRPELGFDGNNCAILVDIDEQSSDIADGVNESLETRENQQDKDDLDKIGAGDQGLMFGFAIKETPELMPLPISLAHSLMRRVASLRKEGRLDWLRPDAKAQVTVEYDDEN---KPKRIDTVVISTQTDATVSNDEIREAMIDMVIKKVIPSQYLDKDTKF 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.707e-61
Identity = 127/232 (54.74%), Postives = 155/232 (66.81%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV-------HGHLSKRP-EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            LFTSESV EGHPDK+CDQISDAILDA   +DP+++VACET   T LV+V GEITT   V+    VR T R IG+     G DAD C VL  I +QS DIA GV       +G +S+   E IGAGDQG MFGYAT+ET  +MPL+  LA +L  +L+EVRK+    +LRPDGKTQVTVEY +      PVR+ T++ISTQH    T + I  DL EHV+ PV+P + LDE T
Sbjct:    5 LFTSESVTEGHPDKICDQISDAILDAIFAKDPNARVACETSVTTGLVLVSGEITTNCYVDIPSTVRQTIREIGYTRAKYGFDADTCAVLTSIGEQSADIALGVDRALEAKNGEMSEEEIEAIGAGDQGMMFGYATNETESYMPLAIDLAHRLARRLSEVRKSDILDYLRPDGKTQVTVEYEDNR----PVRIDTIVISTQHHPEATQERIRRDLLEHVVFPVVPSELLDEST 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRS7 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=metK PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.030e-61
Identity = 130/235 (55.32%), Postives = 159/235 (67.66%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ETC  T  V VFGEI+T A V+  ++VRDT   IG+   + G  A++  V   + +QSPDIAQGV+  L  R  +      IGAGDQG MFG+A DETPE MPL   L+ QL  +L  +RK+G   +LRPD K+QVTVEY   +    PVRV TV+ISTQHD  V+ND+I  D+ E VIK VIP  YLDEKT F
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAREGQSDDFNVIGAGDQGLMFGFAIDETPELMPLPISLSHQLVRRLAALRKSGEISYLRPDAKSQVTVEYDEHD---KPVRVDTVVISTQHDPEVSNDQIRQDMIEQVIKAVIPAHYLDEKTRF 234          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STREM (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=metK PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.030e-61
Identity = 130/235 (55.32%), Postives = 159/235 (67.66%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ETC  T  V VFGEI+T A V+  ++VRDT   IG+   + G  A++  V   + +QSPDIAQGV+  L  R  +      IGAGDQG MFG+A DETPE MPL   L+ QL  +L  +RK+G   +LRPD K+QVTVEY   +    PVRV TV+ISTQHD  V+ND+I  D+ E VIK VIP  YLDEKT F
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAREGQSDDFNVIGAGDQGLMFGFAIDETPELMPLPISLSHQLVRRLATLRKSGEISYLRPDAKSQVTVEYDEHD---KPVRVDTVVISTQHDPEVSNDQIRQDMIEQVIKAVIPAHYLDEKTRF 234          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRE4 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. equi (strain 4047) GN=metK PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.030e-61
Identity = 130/235 (55.32%), Postives = 159/235 (67.66%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ETC  T  V VFGEI+T A V+  ++VRDT   IG+   + G  A++  V   + +QSPDIAQGV+  L  R  +      IGAGDQG MFG+A DETPE MPL   L+ QL  +L  +RK+G   +LRPD K+QVTVEY   +    PVRV TV+ISTQHD  V+ND+I  D+ E VIK VIP  YLDEKT F
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAREGQSDDFNAIGAGDQGLMFGFAIDETPELMPLPISLSHQLVRRLATLRKSGEISYLRPDAKSQVTVEYDEHD---KPVRVDTVVISTQHDPEVSNDQIRQDMIEQVIKAVIPAHYLDEKTRF 234          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_FERNB (S-adenosylmethionine synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=metK PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.030e-61
Identity = 130/230 (56.52%), Postives = 156/230 (67.83%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH--------GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 755
            LFTSESV EGHPDK+ DQISDAILDA +EQDP ++VA ET   T + +V GE+TTKA V+ + IVR T  +IG+     G D + C VL  I  QSPDIA GV+               E++GAGDQG MFGYAT+ET E MPL  +LA +L  KL EVRKNGT P+LRPDGKTQVT+E Y+EN    PVRV TVLISTQH+  VT  EI   L ++VI P+IPE   D+
Sbjct:    4 LFTSESVTEGHPDKMADQISDAILDAIIEQDPKARVAVETLLTTGVAIVAGEVTTKAYVDVQDIVRKTVLDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVNEAAEFKQGDKAEDEIEKVGAGDQGMMFGYATNETEELMPLPIMLAHKLAMKLAEVRKNGTVPFLRPDGKTQVTIE-YDENEK--PVRVDTVLISTQHEPDVTIPEIREALVKYVINPIIPENLRDD 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DEHE1 (S-adenosylmethionine synthetase OS=Dehalococcoides ethenogenes (strain 195) GN=metK PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.030e-61
Identity = 121/238 (50.84%), Postives = 156/238 (65.55%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            N   +LFTSESV EGHPDK+CDQISDA+LDA + +DP++ VACET     LV+V GEITT   V   ++VR   ++IG+   + G D   C VL  I +QSPDIA GV+     +  ++      GAGDQG MFGYA  ETPE+MPL   LA +L  +L+EVRKNGT  +LRPDGK+QVTVEY+N        R+ +V+I  QHD  VT ++I AD+   VIKP+IP   LDE T ++
Sbjct:    7 NSSKYLFTSESVTEGHPDKICDQISDAVLDAIIAKDPNAHVACETAVTNGLVVVMGEITTSCYVEIPELVRGVIKDIGYTKPEYGFDDRTCGVLTSINRQSPDIALGVNKSQEAKSGQVDELDLTGAGDQGMMFGYACTETPEYMPLPISLAHRLSKRLSEVRKNGTLAYLRPDGKSQVTVEYHNGEAK----RISSVVIGAQHDPDVTTEKIQADIIREVIKPIIPTNLLDENTEYY 240          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SYMTH3.604e-6153.25S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_LACAC3.604e-6154.62S-adenosylmethionine synthetase OS=Lactobacillus a... [more]
METK_THEM44.707e-6156.71S-adenosylmethionine synthetase OS=Thermosipho mel... [more]
METK_LACJO4.707e-6154.01S-adenosylmethionine synthetase OS=Lactobacillus j... [more]
METK_DESHD4.707e-6154.74S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK_STRS78.030e-6155.32S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_STREM8.030e-6155.32S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_STRE48.030e-6155.32S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_FERNB8.030e-6156.52S-adenosylmethionine synthetase OS=Fervidobacteriu... [more]
METK_DEHE18.030e-6150.84S-adenosylmethionine synthetase OS=Dehalococcoides... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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