DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STAA3 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300) GN=metK PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.370e-60
Identity = 121/235 (51.49%), Postives = 162/235 (68.94%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+ DQ+SDAILDA L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV   L  R        E  GAGDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRGC (S-adenosylmethionine synthetase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metK PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.789e-60
Identity = 132/236 (55.93%), Postives = 161/236 (68.22%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA L QDPD+ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DETPE MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+EI  D+ E VIK VIP +YLD+KT F
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAVLSQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDH--PVRVDTVVISTQHDPEATNEEIHRDVIEKVIKAVIPAQYLDDKTKF 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRA5 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype V GN=metK PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.789e-60
Identity = 132/236 (55.93%), Postives = 163/236 (69.07%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH------GHLSKRP-EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA LEQDPD+ VA ET   T  V VFGEI+T A V+  ++VR+T   IG+   + G  A++  V   + +QSPDIAQGV+      G L + P + IGAGDQG MFG+A DETPE MPL   LA QL  KLT++RK+G   +LRPD K+QVTVE Y+EN    P+RV  V+ISTQHD  VTND++  D+ E VI  VIP  YLD++T F
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVE-YDENDQ--PIRVDAVVISTQHDPNVTNDQLHKDVIEKVINEVIPSHYLDDQTKF 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRA1 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype Ia GN=metK PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.789e-60
Identity = 132/236 (55.93%), Postives = 163/236 (69.07%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH------GHLSKRP-EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA LEQDPD+ VA ET   T  V VFGEI+T A V+  ++VR+T   IG+   + G  A++  V   + +QSPDIAQGV+      G L + P + IGAGDQG MFG+A DETPE MPL   LA QL  KLT++RK+G   +LRPD K+QVTVE Y+EN    P+RV  V+ISTQHD  VTND++  D+ E VI  VIP  YLD++T F
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVE-YDENDQ--PIRVDAVVISTQHDPNVTNDQLHKDVIEKVINEVIPSHYLDDQTKF 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ROSCS (S-adenosylmethionine synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=metK PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.789e-60
Identity = 125/234 (53.42%), Postives = 157/234 (67.09%), Query Frame = 3
Query:   93 FTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEIT-TKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPE---------EIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            FTSESV EGHPDK+CDQ+SDA+LDA L  DP ++VACET T T L++V GE+T  +  +  E+IVR T ++IG+     G DAD C V+V I  QSPDIAQGV+  L  R +          IGAGDQG MFG+A +ETPE MPL   LA ++G +L+ +RK+G  P+LRPDGK+QVT+EY Y       PVRV TVL+S QH   VT ++I  D+  HVI  VIP   LDEKT
Sbjct:   13 FTSESVTEGHPDKICDQVSDAVLDAFLSHDPRARVACETATTTGLIVVIGEVTYEQGYIPIEEIVRKTIKDIGYTDAAYGFDADTCGVMVAIHGQSPDIAQGVNRALEVRSDGQVTEEEVATIGAGDQGMMFGFACNETPELMPLPIALAHRIGRRLSRLRKDGVLPYLRPDGKSQVTIEYSYGR-----PVRVDTVLVSNQHAPDVTQEQIRHDIIHHVIHEVIPNDLLDEKT 241          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SYNP2 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=metK PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.051e-60
Identity = 127/230 (55.22%), Postives = 159/230 (69.13%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV--------TNDEIAADLKEHVIKPV 731
            +LFTSESV EGHPDK+CDQISDAILDA L  DP S+VA E  T T LV++ GE+TT+ANVN+ ++ R   + IG+ + D G  A++C V+V +++QSPDIAQGV     +R        +EIGAGDQG MFGYA +ETPEFMPL   LA +L  KL++VRK+G  P+L PDGKTQVTV Y  E+G   PV + T+LISTQH ET+           +I ADL E VIKPV
Sbjct:    5 YLFTSESVTEGHPDKICDQISDAILDAVLAADPSSRVAAEVVTNTGLVLITGELTTQANVNFIQVARQKIKEIGYTNADNGFSANSCSVMVALDEQSPDIAQGVTSAQEQRDKLSDDQLDEIGAGDQGLMFGYACNETPEFMPLPISLAHRLSLKLSQVRKSGELPYLGPDGKTQVTVIY--EDGK--PVGIDTILISTQHTETIGALTDNTEIQAKIKADLLEKVIKPV 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STAAR (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MRSA252) GN=metK PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.051e-60
Identity = 120/235 (51.06%), Postives = 162/235 (68.94%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+ DQ+SDAILDA L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV   L  R        E  GAGDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STAAN (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain N315) GN=metK PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.051e-60
Identity = 120/235 (51.06%), Postives = 162/235 (68.94%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+ DQ+SDAILDA L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV   L  R        E  GAGDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STAAM (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metK PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.051e-60
Identity = 120/235 (51.06%), Postives = 162/235 (68.94%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+ DQ+SDAILDA L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV   L  R        E  GAGDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STAA9 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH9) GN=metK PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.051e-60
Identity = 120/235 (51.06%), Postives = 162/235 (68.94%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV EGHPDK+ DQ+SDAILDA L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV   L  R        E  GAGDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAA31.370e-6051.49S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STRGC1.789e-6055.93S-adenosylmethionine synthetase OS=Streptococcus g... [more]
METK_STRA51.789e-6055.93S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STRA11.789e-6055.93S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_ROSCS1.789e-6053.42S-adenosylmethionine synthetase OS=Roseiflexus cas... [more]
METK_SYNP23.051e-6055.22S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_STAAR3.051e-6051.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAN3.051e-6051.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAM3.051e-6051.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA93.051e-6051.06S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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