DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_VIBFM (S-adenosylmethionine synthetase OS=Vibrio fischeri (strain MJ11) GN=metK PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.085e-57
Identity = 121/230 (52.61%), Postives = 159/230 (69.13%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV GE+TT A V+ E+I R+T R IG+V  D+G DA++C VL  I +QSPDI QGV       P+E GAGDQG MFGYAT+ETP  MP     +  L  K  EVRK+G   +LRPD K+QVT +Y  + G +  V +  V++STQH ++VT  ++   + E +IKPV+P ++L++ T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETPILMPAPITYSHLLVQKQAEVRKSGKLDFLRPDAKSQVTFQY--DQGKI--VGIDAVVLSTQHCDSVTTPDLREAVMEEIIKPVLPAEWLNKDTNF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_VIBF1 (S-adenosylmethionine synthetase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=metK PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.085e-57
Identity = 121/230 (52.61%), Postives = 159/230 (69.13%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV GE+TT A V+ E+I R+T R IG+V  D+G DA++C VL  I +QSPDI QGV       P+E GAGDQG MFGYAT+ETP  MP     +  L  K  EVRK+G   +LRPD K+QVT +Y  + G +  V +  V++STQH ++VT  ++   + E +IKPV+P ++L++ T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETPILMPAPITYSHLLVQKQAEVRKSGKLDFLRPDAKSQVTFQY--DQGKI--VGIDAVVLSTQHCDSVTTPDLREAVMEEIIKPVLPAEWLNKDTNF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRZP (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain P1031) GN=metK PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.085e-57
Identity = 126/236 (53.39%), Postives = 158/236 (66.95%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN++I  D+ + VIK VIP  YLD+K  F
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKAKF 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SHEHH (S-adenosylmethionine synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=metK PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.085e-57
Identity = 118/228 (51.75%), Postives = 156/228 (68.42%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            M   LFTSESV+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV GE+TT A V+ E+I R T R+IG+   D+G DAD+C +L  I +QSPDI QGV       P+E GAGDQG MFGYA +ET   MP     +  L  + +EVRK+ T PWLRPD K+QVT   YN +G++    +  V++STQH ++V+  ++   + E +IKPV+P K+L + T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVRDIGYTHSDMGFDADSCAILNVIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYANNETDSLMPAPITYSHMLVKRQSEVRKDKTLPWLRPDAKSQVTFA-YNPDGSI--AGIDAVVLSTQHCDSVSQSDLIEGVMETIIKPVLPAKWLSKDT 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PROMA (S-adenosylmethionine synthetase OS=Prochlorococcus marinus GN=metK PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.085e-57
Identity = 122/245 (49.80%), Postives = 162/245 (66.12%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDV-GLDADNCKVLVYIEQQSPDIAQGV---HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPV---IPEKYLDEKTIF 767
            M +F+FTSESV EGHPDK+CDQ+SDAILDA L+QDP+S+VACET   T L ++ GE+T+KA V++  +VR+  + IG+      G D+++C VLV ++QQSPDIAQGV     H     +++GAGDQG MFG+A DETPE MPL   LA +L  +L +VR +GT  +L PDGKTQV+V Y N      P  + T+LISTQH         E    ++I+ DL E V+KP    +P K + EKT F
Sbjct:    1 MPSFVFTSESVTEGHPDKICDQVSDAILDALLDQDPNSRVACETVVNTGLCLITGEVTSKAKVDFINLVREVIKEIGYFGAKAGGFDSNSCSVLVALDQQSPDIAQGVDEADDHSGNPFDQVGAGDQGIMFGFACDETPELMPLPISLAHRLSRRLAKVRHDGTLKYLLPDGKTQVSVLYENNK----PTAIDTILISTQHTAEVEGITSEKGIREQISKDLWELVVKPATEDLPIKPIQEKTRF 241          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.085e-57
Identity = 119/231 (51.52%), Postives = 154/231 (66.67%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            M  FLFTSESV+EGHPDK+ DQ+SDAILDA L+QD  S+VACET   T + ++ GEITT A V Y K+VR+  R+IG+    +G D + C VL  I++QSPDI+QGV        E+ GAGDQG MFGYA DET   MP+    A QL  +++EVRK+G   +LRPD K+QV+V+Y N+     PVRV TV++S+QH   V  + +   L E VIK V+P   LDE T F+
Sbjct:    3 MTDFLFTSESVSEGHPDKVADQVSDAILDAILDQDRQSRVACETMVTTGMAVIAGEITTNARVEYPKVVREVIRDIGYNDSAMGFDWETCAVLTSIDRQSPDISQGVTEGAGLFKEQ-GAGDQGLMFGYACDETSVLMPMPITYAHQLTQRMSEVRKSGLLTFLRPDSKSQVSVQYINDK----PVRVDTVVVSSQHAPDVAYETLREALIEEVIKKVVPADMLDENTKFY 228          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SYNJA (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain JA-3-3Ab) GN=metK PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.417e-57
Identity = 123/231 (53.25%), Postives = 154/231 (66.67%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPVIPE 740
            +F+SESV EGHPDK+CDQISDAI+DA L  DP S+VA E    T +V++ GEIT++A+VN+ ++VRD    IG+     G  A++C VLV  ++QSPDIAQGV+  L  R  +      IGAGDQG MFG+A DETPE MPL   LA +L  +L  VRKNGT P+LRPDGKTQVTV Y  E G   PV +HT+LISTQH        +E    + I ADL E V++PV  E
Sbjct:    1 MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGMVILTGEITSQAHVNFTRLVRDKVAEIGYTDAKNGFSAESCAVLVAFDEQSPDIAQGVNLALESRTSQEDEFDLIGAGDQGLMFGFACDETPELMPLPISLAHRLSRQLAAVRKNGTLPYLRPDGKTQVTVAY--EEGR--PVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVQPVFAE 227          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SHEPW (S-adenosylmethionine synthetase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=metK PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.417e-57
Identity = 118/228 (51.75%), Postives = 152/228 (66.67%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            M   LFTSESV+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV GE+TT A V+ E+I R T R IG+   D+G DAD+C +L  I +QSPDI QGV       P+E GAGDQG MFGYA +ET   MP     + +L  + +EVRK+ T PWLRPD K+QVT  Y N+        +  V++STQH E V+  ++   + E +IKPV+P K+L + T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAILNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYANNETDVLMPAPITYSHKLVKRQSEVRKDKTLPWLRPDAKSQVTFAYNNDGSI---AGIDAVVLSTQHREDVSQADLIEGVMETIIKPVLPAKWLSKDT 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SALG2 (S-adenosylmethionine synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metK PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.417e-57
Identity = 120/230 (52.17%), Postives = 156/230 (67.83%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA L+QDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+V  D+G DA++C VL  I +QSPDI QGV         E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +  V +  V++STQH E +    +   + E +IKP++P ++L+  T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RSDLLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_RHOBA (S-adenosylmethionine synthetase OS=Rhodopirellula baltica GN=metK PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.417e-57
Identity = 115/217 (53.00%), Postives = 151/217 (69.59%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 737
            FLFTSESV+ GHPDKL D+ISD+ILDA L QDP S+VACET   T L ++ GEI++KA+V+YEKIVRDT   +G+   D+G+D   C+V + ++ QSPDIAQGV+       ++IGAGDQG MFGYA  +TPE MPL   L+ ++  ++TE R N    WLRPD K+QVTVEY        PVR+  V++S QH   V++DEI   + E+V+KP IP
Sbjct:    8 FLFTSESVSMGHPDKLADRISDSILDALLAQDPHSRVACETLVTTGLAVIAGEISSKADVDYEKIVRDTIVAVGYDDPDIGIDGKTCEVQIRLDAQSPDIAQGVNSD-EASGKDIGAGDQGLMFGYACKDTPELMPLPIALSHRIINRITEARFNKEVDWLRPDNKSQVTVEYDGNR----PVRIEAVVVSAQHGPDVSHDEIEKFVIENVVKPSIP 219          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_VIBFM1.085e-5752.61S-adenosylmethionine synthetase OS=Vibrio fischeri... [more]
METK_VIBF11.085e-5752.61S-adenosylmethionine synthetase OS=Vibrio fischeri... [more]
METK_STRZP1.085e-5753.39S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_SHEHH1.085e-5751.75S-adenosylmethionine synthetase OS=Shewanella hali... [more]
METK_PROMA1.085e-5749.80S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PELCD1.085e-5751.52S-adenosylmethionine synthetase OS=Pelobacter carb... [more]
METK_SYNJA1.417e-5753.25S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SHEPW1.417e-5751.75S-adenosylmethionine synthetase OS=Shewanella piez... [more]
METK_SALG21.417e-5752.17S-adenosylmethionine synthetase OS=Salmonella gall... [more]
METK_RHOBA1.417e-5753.00S-adenosylmethionine synthetase OS=Rhodopirellula ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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