DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRZJ (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain JJA) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 126/236 (53.39%), Postives = 158/236 (66.95%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+    +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN++I  D+ + VIK VIP  YLD+KT F
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSEEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNEQIHQDVIKKVIKEVIPSSYLDDKTKF 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SHEB9 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS195) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 120/230 (52.17%), Postives = 155/230 (67.39%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V GE+TT A V+ E+I R T R IG+   D+G DAD+C VL  I +QSPDI QGV       P E GAGDQG MFGYA +ET   MP     A  L  + +EVRKNGT PWLRPD K+QVT  Y  ++G +  V +  V++STQH + V+  ++   + E +IKPV+P ++L++ T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPAEQGAGDQGLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAY--DDGKI--VGIDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SHEB8 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS185) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 120/230 (52.17%), Postives = 155/230 (67.39%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V GE+TT A V+ E+I R T R IG+   D+G DAD+C VL  I +QSPDI QGV       P E GAGDQG MFGYA +ET   MP     A  L  + +EVRKNGT PWLRPD K+QVT  Y  ++G +  V +  V++STQH + V+  ++   + E +IKPV+P ++L++ T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPAEQGAGDQGLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAY--DDGKI--VGIDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SHEB5 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 120/230 (52.17%), Postives = 155/230 (67.39%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V GE+TT A V+ E+I R T R IG+   D+G DAD+C VL  I +QSPDI QGV       P E GAGDQG MFGYA +ET   MP     A  L  + +EVRKNGT PWLRPD K+QVT  Y  ++G +  V +  V++STQH + V+  ++   + E +IKPV+P ++L++ T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPAEQGAGDQGLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAY--DDGKI--VGIDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SHEB2 (S-adenosylmethionine synthetase OS=Shewanella baltica (strain OS223) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 120/230 (52.17%), Postives = 155/230 (67.39%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V GE+TT A V+ E+I R T R IG+   D+G DAD+C VL  I +QSPDI QGV       P E GAGDQG MFGYA +ET   MP     A  L  + +EVRKNGT PWLRPD K+QVT  Y  ++G +  V +  V++STQH + V+  ++   + E +IKPV+P ++L++ T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPAEQGAGDQGLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAY--DDGKI--VGIDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LEGPH (S-adenosylmethionine synthetase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 117/227 (51.54%), Postives = 157/227 (69.16%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E ++FTSESV+EGHPDK+ DQISDAILDA L QDP ++VACE   KT +V+V GEITTKA V+ E+I R   ++IG+ S  +G D ++C VL  I +QSPDIAQGV    +K    +GAGDQG MFGYA+ ET  FMP     A +L  KL + RK+G  PWLRPD K Q+T++Y  E G  +PV V TV+ STQH   + + ++   ++E +IK V+P ++L++KT
Sbjct:    3 EVYVFTSESVSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMVLVGGEITTKAWVDVEEITRHVIKDIGYNSSQMGFDWESCAVLSAIGKQSPDIAQGVDNQQTK---ILGAGDQGLMFGYASRETDVFMPAPIAYAHRLMEKLAKARKSGQLPWLRPDAKCQLTLKY--EQG--MPVEVDTVVFSTQHSPDIEHKDLVEAIREEIIKSVLPAEWLNDKT 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LEGPC (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Corby) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 117/227 (51.54%), Postives = 157/227 (69.16%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E ++FTSESV+EGHPDK+ DQISDAILDA L QDP ++VACE   KT +V+V GEITTKA V+ E+I R   ++IG+ S  +G D ++C VL  I +QSPDIAQGV    +K    +GAGDQG MFGYA+ ET  FMP     A +L  KL + RK+G  PWLRPD K Q+T++Y  E G  +PV V TV+ STQH   + + ++   ++E +IK V+P ++L++KT
Sbjct:    3 EVYVFTSESVSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMVLVGGEITTKAWVDVEEITRHVIKDIGYNSSQMGFDWESCAVLSAIGKQSPDIAQGVDNQQTK---ILGAGDQGLMFGYASRETDVFMPAPIAYAHRLMEKLAKARKSGQLPWLRPDAKCQLTLKY--EQG--MPVEVDTVVFSTQHSPDIEHKDLVEAIREEIIKSVLPAEWLNDKT 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LEGPA (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Paris) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 117/227 (51.54%), Postives = 157/227 (69.16%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E ++FTSESV+EGHPDK+ DQISDAILDA L QDP ++VACE   KT +V+V GEITTKA V+ E+I R   ++IG+ S  +G D ++C VL  I +QSPDIAQGV    +K    +GAGDQG MFGYA+ ET  FMP     A +L  KL + RK+G  PWLRPD K Q+T++Y  E G  +PV V TV+ STQH   + + ++   ++E +IK V+P ++L++KT
Sbjct:    3 EVYVFTSESVSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMVLVGGEITTKAWVDVEEITRHVIKDIGYNSSQMGFDWESCAVLSAIGKQSPDIAQGVDNQQTK---ILGAGDQGLMFGYASRETDVFMPAPIAYAHRLMEKLAKARKSGQLPWLRPDAKCQLTLKY--EQG--MPVEVDTVVFSTQHSPDIEHKDLVEAIREEIIKSVLPAEWLNDKT 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.158e-57
Identity = 116/230 (50.43%), Postives = 154/230 (66.96%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M  +LFTSESV+EGHPDK+ DQISDAILDA L QD  ++VA ET   T LV++ GEITT ANV+Y  + R+T + IG+ + D+G DA  C VLV  ++QSPDIAQGV+        + GAGDQG MFGYA DETP  MP     A +L  +  E+RK+G  PWLRPD K+Q+T  Y +E G  +P R+ TV++STQH   +++D +   + E ++KPV+P   L  +T F
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQISDAILDAILTQDKHARVAAETLVNTGLVVLAGEITTHANVDYIHVARETIKRIGYNTSDLGFDAKGCAVLVGYDKQSPDIAQGVNEGQGIDLNQ-GAGDQGLMFGYACDETPTLMPFPIYYAHRLVQRQAELRKDGRLPWLRPDAKSQITCAYDSETG--LPKRIDTVVLSTQHSPDISHDMLTEAVIEDIVKPVLPAHMLTAETKF 227          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SYNS3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9311) GN=metK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.124e-57
Identity = 120/229 (52.40%), Postives = 151/229 (65.94%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDV-GLDADNCKVLVYIEQQSPDIAQGV---HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKP 728
            M  ++FTSESV EGHPDK+CDQ+SDA+LDA L QD  S+VACET   T L M+ GE+T+KA V++  +VRD  R+IG+      G DA +C VLV ++QQSPDIAQGV     H     +++GAGDQG MFGYA +ETPE MPL   LA +L  +L EVR NGT  +L PDGKTQV+V Y N+     PV + T+LISTQH        DE    + I+ DL  HV+ P
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDSTSRVACETVVNTGLCMITGEVTSKAQVDFIHLVRDVIRDIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVDEADDHAGDPLDKVGAGDQGIMFGYACNETPELMPLPISLAHRLARRLAEVRHNGTLDYLLPDGKTQVSVVYENDK----PVEIDTILISTQHTAEVTGLTDEQEVRNRISEDLWTHVVLP 225          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRZJ3.158e-5753.39S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_SHEB93.158e-5752.17S-adenosylmethionine synthetase OS=Shewanella balt... [more]
METK_SHEB83.158e-5752.17S-adenosylmethionine synthetase OS=Shewanella balt... [more]
METK_SHEB53.158e-5752.17S-adenosylmethionine synthetase OS=Shewanella balt... [more]
METK_SHEB23.158e-5752.17S-adenosylmethionine synthetase OS=Shewanella balt... [more]
METK_LEGPH3.158e-5751.54S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_LEGPC3.158e-5751.54S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_LEGPA3.158e-5751.54S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_LARHH3.158e-5750.43S-adenosylmethionine synthetase OS=Laribacter hong... [more]
METK_SYNS34.124e-5752.40S-adenosylmethionine synthetase OS=Synechococcus s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
back to top