DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.034e-57
Identity = 116/230 (50.43%), Postives = 153/230 (66.52%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            E  +FTSESV+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ GEITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y  ENG   PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAY--ENGK--PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFH 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 7.034e-57
Identity = 116/230 (50.43%), Postives = 153/230 (66.52%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            E  +FTSESV+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ GEITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y  ENG   PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAY--ENGK--PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFH 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.034e-57
Identity = 116/230 (50.43%), Postives = 153/230 (66.52%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            E  +FTSESV+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ GEITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y  ENG   PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAY--ENGK--PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFH 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.034e-57
Identity = 116/230 (50.43%), Postives = 153/230 (66.52%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            E  +FTSESV+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ GEITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y  ENG   PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAY--ENGK--PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFH 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_VIBHB (S-adenosylmethionine synthetase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metK PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.187e-57
Identity = 119/230 (51.74%), Postives = 158/230 (68.70%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV GE+TT A V+ E+I R+T R IG+V  D+G DA++C VL  I +QSPDI QGV       P+E GAGDQG MFGYAT+ET   MP     + +L  K  EVRK+G   +LRPD K+QVT +Y  + G +  V +  V++STQH ++VT  ++   + E +IKPV+P +++ + T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEILMPAPITYSHRLVQKQAEVRKSGKLDFLRPDAKSQVTFQY--DQGKI--VGIDAVVLSTQHCDSVTTPDLREAVMEEIIKPVLPSEWITKDTNF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SHESW (S-adenosylmethionine synthetase OS=Shewanella sp. (strain W3-18-1) GN=metK PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.187e-57
Identity = 116/228 (50.88%), Postives = 150/228 (65.79%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V GE+TT A V+ E++ R T R IG+   D+G DAD+C VL  I +QSPDI QGV       P+E GAGDQG MFGYA++ET   MP     A  L  + +EVRKNGT PWLRPD K+QVT  Y N       V +  +++STQH   +   ++   + E +IKPV+P ++L + T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYASNETEILMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAYENNK----IVGIDAIVLSTQHSPDIAQADLIEGVMESIIKPVLPAQWLSKDT 221          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SHEPC (S-adenosylmethionine synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=metK PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.200e-56
Identity = 116/228 (50.88%), Postives = 150/228 (65.79%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            M   LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT +V+V GE+TT A V+ E++ R T R IG+   D+G DAD+C VL  I +QSPDI QGV       P+E GAGDQG MFGYA++ET   MP     A  L  + +EVRKNGT PWLRPD K+QVT  Y N       V +  +++STQH   +   ++   + E +IKPV+P ++L + T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYASNETEILMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAYENNK----IVGIDAIVLSTQHSPDIAQADLIEGVMETIIKPVLPAQWLSKDT 221          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PSEHT (S-adenosylmethionine synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=metK PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.200e-56
Identity = 119/230 (51.74%), Postives = 153/230 (66.52%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M   LFTSESV+EGHPDK+ DQISDA+LDA LEQD  ++VACET  KT +VMV GEITT A V+ E+I R T R+IG+ + D+G DAD+C +L  I +QSPDI QGV       PEE GAGDQG MFGYA +ET   MP     + +L  +  +VRK+G   WLRPD K+QVT  Y  ENG   PV +  V++STQH E ++  ++   + E +IKPV+P + +   T F
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDSHARVACETYVKTGMVMVGGEITTSAWVDIEEITRKTIRDIGYTNSDMGFDADSCAILNTIGKQSPDINQGVD---RTSPEEQGAGDQGLMFGYACNETEVLMPAPITYSHRLVQRQAQVRKSGELNWLRPDAKSQVTFAY--ENGK--PVGIDAVVLSTQHSEDISQKDLIEAVMETIIKPVLPAELITSATKF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.567e-56
Identity = 122/239 (51.05%), Postives = 155/239 (64.85%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV-------HGHL-SKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            M   LFTSESV EGHPDK+ DQISDAILDA +E DP  +VA ET   T LV+V GEITT   V+  ++VR T  +IG+     G DA+ C VL  +++QS DIA GV        G +  K  + IGAGDQG MFGYA++ET   MP+   LA+++  +L EVRK G  P+LRPDGKTQVTVEY +      P+RV TV++S QH   V++  I  D+ EHVIK VIP + +D  TIF+
Sbjct:    1 MARTLFTSESVTEGHPDKVADQISDAILDAIMELDPYGRVAAETIVTTGLVLVAGEITTNCYVDIPRLVRSTIEDIGYTRAKYGFDAETCAVLTSLDEQSGDIALGVDRAFEAKKGEMDDKELDAIGAGDQGMMFGYASNETAVLMPMPIYLASKMAERLGEVRKEGIIPYLRPDGKTQVTVEYEDYK----PLRVTTVVVSAQHHPEVSSATIEKDIIEHVIKAVIPPEMIDAHTIFY 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SYNPX (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain WH8102) GN=metK PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.567e-56
Identity = 118/229 (51.53%), Postives = 151/229 (65.94%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDV-GLDADNCKVLVYIEQQSPDIAQGV---HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKP 728
            M  ++FTSESV EGHPDK+CDQ+SDA+LDA L QDP S+VACET   T L M+ GE+T+KA V++  +VR+  + IG+      G DA++C VLV ++QQSPDIAQGV     H     + +GAGDQG MFGYA +ETPE MPL   LA +L  +L EVR NG+  +L PDGKTQV+V Y N+     PV + T+LISTQH        DE    + I  DL  HV++P
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCMITGEVTSKAQVDFIHLVRNVIKEIGYSGARAGGFDANSCAVLVALDQQSPDIAQGVDEADDHEGDPLDRVGAGDQGIMFGYACNETPELMPLPISLAHRLAKRLAEVRHNGSLEYLLPDGKTQVSVVYENDK----PVAIDTILISTQHTAEVAGISDEQGIRERITEDLWTHVVEP 225          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIBY7.034e-5750.43S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBT7.034e-5750.43S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBS7.034e-5750.43S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC7.034e-5750.43S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_VIBHB9.187e-5751.74S-adenosylmethionine synthetase OS=Vibrio harveyi ... [more]
METK_SHESW9.187e-5750.88S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHEPC1.200e-5650.88S-adenosylmethionine synthetase OS=Shewanella putr... [more]
METK_PSEHT1.200e-5651.74S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_SYNWW1.567e-5651.05S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_SYNPX1.567e-5651.53S-adenosylmethionine synthetase OS=Synechococcus s... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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