DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.016e-55
Identity = 117/227 (51.54%), Postives = 150/227 (66.08%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            FLFTSESV+EGHPDK+ DQISDAILDA   QDP+++VA ET   T LV++ GEITT ANV+Y ++ RDT R+IG+ + + G+D   C VLV  ++QSPDIAQGV    S+     GAGDQG MFGYA DETP+ MP     A +L  + +E+RK+G  PWLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE  +  KT F
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV-DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKF 227          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.016e-55
Identity = 117/227 (51.54%), Postives = 150/227 (66.08%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            FLFTSESV+EGHPDK+ DQISDAILDA   QDP+++VA ET   T LV++ GEITT ANV+Y ++ RDT R+IG+ + + G+D   C VLV  ++QSPDIAQGV    S+     GAGDQG MFGYA DETP+ MP     A +L  + +E+RK+G  PWLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE  +  KT F
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV-DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKF 227          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRU0 (S-adenosylmethionine synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=metK PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.327e-55
Identity = 121/233 (51.93%), Postives = 156/233 (66.95%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A++  V   + +QS DIAQGV+  L  R  +      IGAGDQG MFG+A DETPE MPL   L+ +L  KL ++RK+G   +LRPD K+QVTVEY + +    PVRV TV+ISTQHD  V+ + I  D+ E VIK VIP  ++D+ T
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETVVYTGSVHVFGEISTSAYVDINRVVRDTIAEIGYTNAEYGFSANSVGVHPSLVEQSTDIAQGVNEALEAREGQKDDLNLIGAGDQGLMFGFAIDETPELMPLPISLSHKLVKKLADLRKSGDITYLRPDAKSQVTVEYDDND---QPVRVDTVVISTQHDPEVSQETIRHDVIEKVIKEVIPTSFIDDNT 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PROMM (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9313) GN=metK PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.327e-55
Identity = 121/245 (49.39%), Postives = 156/245 (63.67%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDV-GLDADNCKVLVYIEQQSPDIAQGVH---GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPV---IPEKYLDEKTIF 767
            M  ++FTSESV EGHPDK+CDQ+SDA+LDA L QDP S+VACET   T L ++ GE+T+ A V++  +VR+  R IG+      G DA +C VLV ++QQSPDIAQGV+    H     +++GAGDQG MFGYA DETPE MPL   LA +L  +L  VR +G+  +L PDGKTQV+V Y N+     PV + T+LISTQH        DE    + I  DL  HV++P    +P K   E T F
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCLITGEVTSNAQVDFIHLVRNVIREIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVNEADDHSGDPLDKVGAGDQGIMFGYACDETPELMPLPISLAHRLARQLAAVRHDGSLSYLLPDGKTQVSVVYENDR----PVAIDTILISTQHTSEVEGISDENGIRERITQDLWTHVVEPATADLPLKPNREATRF 241          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PETMO (S-adenosylmethionine synthetase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=metK PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.327e-55
Identity = 119/240 (49.58%), Postives = 153/240 (63.75%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPD-----SKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE-------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            M+  LFTSESV EGHPDK+CDQISD ILDA LE++P+     ++ A ET     LV+V GE+ T A ++   +VR+T  +IG+     G D + C V+  IE+QSPDIA GV      + +E       IGAGDQG MFGYAT+ET  +MPL  +LA +L  +L +VRK+ T  +LRPDGKTQVTVEY   N    PV V TVLIS QH   ++  E+   +KEHVI PVIPE  + + T
Sbjct:    1 MKKMLFTSESVTEGHPDKICDQISDTILDAILEKEPEENKMNARCAVETLVTRGLVVVTGEVRTSAYIDVPTLVRNTILDIGYNRAKFGFDGETCAVITSIEEQSPDIALGVDRSFEVKSKEKEDPFEKIGAGDQGIMFGYATNETDAYMPLPILLAHRLAKRLADVRKSNTLDFLRPDGKTQVTVEYDENNN---PVGVETVLISAQHSPDISRQELEEAIKEHVITPVIPENLVTKDT 237          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_NOCSJ (S-adenosylmethionine synthetase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=metK PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.327e-55
Identity = 121/221 (54.75%), Postives = 151/221 (68.33%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVH-GHLSK-----RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI 734
            LFTSESV EGHPDK+ DQISD++LDA LE DP S+VA ET   T +V+V GE+TT   V+ + +VR     IG+ S   G D  +C V+V I  QS DIAQGV  GH S+       ++ GAGDQG MFGYA D+T   MPL  V+A +L  +LT VRK+GT P+LRPDGKTQVT+EY  EN    PVRV TV++S+QHDE    D + AD+K+HVI PV+
Sbjct:    5 LFTSESVTEGHPDKIADQISDSVLDAMLELDPTSRVAVETLLTTGVVVVAGEVTTTGYVDVKDVVRRRIIEIGYDSSVKGFDGHSCGVMVAIGGQSGDIAQGVDTGHESRTGSVDAMDKQGAGDQGLMFGYACDDTDVLMPLPIVIAQRLAEQLTAVRKDGTLPYLRPDGKTQVTIEYDAENR---PVRVDTVVLSSQHDEDTELDTLEADVKKHVIDPVL 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PROMT (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain NATL2A) GN=metK PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.733e-55
Identity = 113/220 (51.36%), Postives = 151/220 (68.64%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVS-DDVGLDADNCKVLVYIEQQSPDIAQGVH---GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIK 725
            M  ++FTSESV EGHPDK+CDQ+SDA+LDACL +DP S+VACE    T L ++ GEIT+KA V++ K+VR+  +NIG+ S  D G DA++C VLV ++QQS DIAQGV+    H +   +++GAGDQG MFG+A DETPE MPL   LA +L  +L  VR      +L PDGKTQV+V Y  ENG  VP  + T+LISTQH   V    +  ++++ + K
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDACLSEDPTSRVACEAVVNTGLCLITGEITSKAEVDFNKLVREVIKNIGYRSASDGGFDANSCAVLVALDQQSSDIAQGVNEAEDHSTDPLDQVGAGDQGIMFGFACDETPELMPLPISLAHRLARRLALVRHQQLIDYLLPDGKTQVSVSY--ENG--VPCSIDTILISTQHKSEVDGITLEEEIQKRIAK 216          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PROM1 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain NATL1A) GN=metK PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.733e-55
Identity = 122/245 (49.80%), Postives = 159/245 (64.90%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVS-DDVGLDADNCKVLVYIEQQSPDIAQGVH---GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV--------TNDEIAADLKEHVIKPV---IPEKYLDEKTIF 767
            M  ++FTSESV EGHPDK+CDQ+SDA+LDACL +DP S+VACE    T L ++ GEIT+KA V++ K+VR+  ++IG+ S  D G DA++C VLV ++QQS DIAQGV+    H +   +++GAGDQG MFG+A DETPE MPL   LA +L  +L  VR      +L PDGKTQV+V Y  ENG  VP  + T+LISTQH   V            IA DL + V++P    +P K   E T F
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDACLSEDPTSRVACEAVVNTGLCLITGEITSKAEVDFNKLVREVIKSIGYRSASDGGFDANSCAVLVALDQQSSDIAQGVNEAEDHSTDPLDQVGAGDQGIMFGFACDETPELMPLPISLAHRLARRLALVRHQQLIDYLLPDGKTQVSVSY--ENG--VPCSIDTILISTQHKSEVDGITLEEEIQKRIAKDLWKFVVEPATEDLPLKPAKESTRF 241          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.733e-55
Identity = 115/230 (50.00%), Postives = 155/230 (67.39%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M  +LFTSESV+EGHPDK+ DQISDA+LD  ++QD  ++VACET  KT +V++ GEITT A V+ E+I R+T  NIG+++ + G DA++C VL  I +QSPDI QGV       P E GAGDQG +FGYAT+ET   MP     A  L  K +E+RK     WLRPD K+QVT +Y  +NG +  + + TV+ STQH E++T D +   + E +IKPV+P K+L + T F
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEIIKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRNTINNIGYINSETGFDANSCAVLSTIGKQSPDITQGVD---RCNPLEQGAGDQGIIFGYATNETEVLMPAPITYAHLLVKKQSELRKKNILHWLRPDAKSQVTFKY--KNGRI--IGIDTVVFSTQHKESITQDVLKEAVMEEIIKPVLPNKWLTKNTKF 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.263e-55
Identity = 110/225 (48.89%), Postives = 153/225 (68.00%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            F+FTSESV+EGHPDK+ DQ+SDA+LDA L QD  ++VACET   T L ++ GEITT A ++Y +I R T + IG+ S D+G D + C VLV + +QSPDIAQGV        ++ GAGDQG MFGYA +ETP  MP+   LA +L  + +E+RK+G  PWLRPD K+QV++ Y +      P  + TV++STQHD  V++ +++  + E +IKPV+P+  L   T
Sbjct:    5 FIFTSESVSEGHPDKMADQVSDAVLDAILTQDKHARVACETLLTTGLCVIAGEITTTAVIDYNQIARQTIKRIGYDSSDIGFDYNTCSVLVTVGKQSPDIAQGVDRAHDDYLDQ-GAGDQGLMFGYACNETPVLMPMPIHLAHRLTERQSELRKDGRLPWLRPDAKSQVSIRYVDGK----PHSIDTVVLSTQHDPEVSHAQLSEAVIEEIIKPVLPKDMLSADT 224          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BORPA1.016e-5551.54S-adenosylmethionine synthetase OS=Bordetella para... [more]
METK_BORBR1.016e-5551.54S-adenosylmethionine synthetase OS=Bordetella bron... [more]
METK_STRU01.327e-5551.93S-adenosylmethionine synthetase OS=Streptococcus u... [more]
METK_PROMM1.327e-5549.39S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PETMO1.327e-5549.58S-adenosylmethionine synthetase OS=Petrotoga mobil... [more]
METK_NOCSJ1.327e-5554.75S-adenosylmethionine synthetase OS=Nocardioides sp... [more]
METK_PROMT1.733e-5551.36S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROM11.733e-5549.80S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_BUCAP1.733e-5550.00S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_THIDA2.263e-5548.89S-adenosylmethionine synthetase OS=Thiobacillus de... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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