DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_RALEH (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.041e-55
Identity = 117/223 (52.47%), Postives = 148/223 (66.37%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 755
            FLFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T LV++ GEITT ANV+Y +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV    S      GAGDQG MFGYA DETPE MP     A +L  + + +R++G  PWLRPD K+QVTV Y +      P  V TV++STQH   +T  +I   + E +IKPV+P + L E
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV-DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVERQSLLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSVDTVVLSTQHSPDITQAQIREAVIEEIIKPVLPAEMLKE 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PSYCK (S-adenosylmethionine synthetase OS=Psychrobacter cryohalolentis (strain K5) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.041e-55
Identity = 112/227 (49.34%), Postives = 150/227 (66.08%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            LFTSESV+EGHPDK+ DQISDAILDA L QD  ++VACET  KT  V++ GEITT AN++ E+IVRDT   IG+   D+G D + C V+  + +QSP+IAQGV       PEE GAGDQG MFGYA++ET   MP     A +L  + +E+R+ G  PWLRPD K QVT++Y        PV +  V++STQHD +++  ++   + E +IK V+P + L   T +H
Sbjct:    6 LFTSESVSEGHPDKMADQISDAILDAILRQDLHARVACETLVKTGAVVLAGEITTTANIDVERIVRDTVNGIGYHHSDLGFDGETCAVINMLGKQSPEIAQGVD---RADPEEQGAGDQGLMFGYASNETEVLMPAPIEYAHRLMERQSELRRAGELPWLRPDAKAQVTLKYDGNK----PVAIDAVVLSTQHDPSISQADLQEAIMESIIKQVLPAELLHAGTRYH 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_MANSM (S-adenosylmethionine synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.041e-55
Identity = 115/228 (50.44%), Postives = 151/228 (66.23%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            M ++LFTSESV+EGHPDK+ DQISDA+LD  L+QDP ++VACET  KT + +V GEITT A V+ E I R    +IG+ S ++G D  +C VL  I +QS DI QGV       P   GAGDQG MFGYAT+ET   MP +   A +L  +   VRKNGT PWLRPD K+QVT++Y N       V V  V++STQH ++VT +++   + E +IKPV+P K+L + T
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIEYIARQVICDIGYTSSEMGFDGHSCAVLNGIGKQSSDINQGVD---RDDPLNQGAGDQGIMFGYATNETEVLMPAAITYAHRLMERQAWVRKNGTLPWLRPDAKSQVTLKYENNK----IVGVDAVVLSTQHSDSVTQEDLHEAVMEEIIKPVLPAKWLSKDT 221          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_JANMA (S-adenosylmethionine synthetase OS=Janthinobacterium sp. (strain Marseille) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.041e-55
Identity = 111/223 (49.78%), Postives = 154/223 (69.06%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 755
            +LFTSESV+EGHPDK+ DQISDAILDA  +QDP ++VA ET   T LV++ GEITT ANV+Y ++ R T + IG+ + D G+D  +C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DETPE MP +   A ++  + +E+RK+G  PWLRPD K+QVT+ Y +      PV + T+++STQH   + + +I   + E +IKPV+P ++L +
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAIFQQDPKARVAAETLCNTGLVVLAGEITTFANVDYIEVARQTIKRIGYDNADYGIDYKSCAVLVAYDKQSPDIAQGVDEGAGIDLDQ-GAGDQGLMFGYACDETPELMPAAIHYAHRIVERQSELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDIEEAVIESIIKPVVPAEWLKD 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DESMR (S-adenosylmethionine synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.041e-55
Identity = 111/225 (49.33%), Postives = 150/225 (66.67%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            +LF+SESV EGHPDK+ DQISD ILDA L QDPD+ VACET   T L  + GEITTKA  ++  IVR+T + IG+ S  +G D + C V+  +++QS DIAQGV      +PE+ GAGDQG MFG+A DET   MP     A +L  +LTEVRK+G   +LRPDGKTQV VEY +      PVR+  V++++QH E +++ ++   +K+ VI   +PE  +D+ T
Sbjct:    8 YLFSSESVTEGHPDKVADQISDGILDAILAQDPDAHVACETLVTTGLAFIAGEITTKAYADFPSIVRETVKEIGYNSSTMGFDWETCAVISSVDKQSVDIAQGVS---RTKPEDQGAGDQGMMFGFACDETETLMPAPIYWAHKLSRRLTEVRKSGVLDFLRPDGKTQVAVEYVDGK----PVRIDNVVVASQHAENISHADLCDAVKKEVIFHTLPESLVDKNT 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DESAD (S-adenosylmethionine synthetase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.041e-55
Identity = 111/225 (49.33%), Postives = 146/225 (64.89%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            + FTSESV EGHPDK+ DQISD+ILDA L QD D++VACET   T +  + GEI+T    ++++IVRDT R IG+V  D+G DAD C V+  I++QS DIAQGV       PE  GAGDQG MFG+A  ET   MP     A +L  KLTEVRK+ T  +LRPDGKT+V  EY +      PVR+  V+I+ QHD+ +   +I  D+K  V+   +P + +D+ T
Sbjct:    8 YFFTSESVTEGHPDKVADQISDSILDAILAQDKDARVACETLVTTGMAFIAGEISTTGYADFQQIVRDTIREIGYVHSDMGFDADTCAVISSIDKQSVDIAQGVD---RNTPESQGAGDQGMMFGFACKETEALMPAPIYYAHKLSRKLTEVRKDATLDYLRPDGKTEVAFEYLDGK----PVRIADVVIAAQHDDGIEQGQIYEDIKREVVLASLPAEMIDDAT 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CORA7 (S-adenosylmethionine synthetase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.041e-55
Identity = 121/228 (53.07%), Postives = 144/228 (63.16%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 755
            LFTSESV EGHPDK+CD ISDAILDA LE+DPD+ VA ET   T  V V GE+ T   V   +IVR T   IGF S DVG D   C V V I +QS +I  GV      R       ++ GAGDQG MFGYAT+ETPEFMPL    A  L  +LT VRK G  P LRPDGKTQVT   Y+EN   VP R+ T++ISTQHD  VT + +A  L+ HV++ V+ +  L +
Sbjct:   11 LFTSESVTEGHPDKICDAISDAILDALLEEDPDAHVAVETLVTTGQVHVVGEVRTSGYVEIPQIVRKTLVEIGFTSSDVGFDGHTCGVNVAIGEQSQEIGAGVDASTEVRSGTFEDDDQYGAGDQGLMFGYATNETPEFMPLPISTAHHLSRRLTHVRKEGIVPSLRPDGKTQVTFA-YDEND--VPTRLETIVISTQHDPEVTQEWLAEQLRTHVVEWVVNDADLSQ 235          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CLAM3 (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.041e-55
Identity = 117/223 (52.47%), Postives = 145/223 (65.02%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI--------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI 734
            LFTSESV EGHPDK+CDQISD+ILDA L QDP S+ A ET   T LV V GE+TT   V+  +IVRD  R+IG+ S +VG D  NC V V I  QSPDIAQGV      R            GAGDQG MFGYA+ +TP FMPL   LA +L  +L  VR +G   +LRPDGKTQVT+ Y      +VP  V TV++STQH   V+ +++  +++EHVI+PV+
Sbjct:    6 LFTSESVTEGHPDKICDQISDSILDALLTQDPTSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESRSGSASTDAHDLQGAGDQGLMFGYASRDTPVFMPLPIYLAHRLAERLAAVRHSGELAYLRPDGKTQVTIGY----EGLVPRTVDTVVLSTQHGPQVSQEDLRREVEEHVIRPVL 224          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_XYLFT (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.584e-55
Identity = 114/233 (48.93%), Postives = 155/233 (66.52%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRK--NGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            M ++LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT + ++ GEITT A V+ E + R    +IG+ S DVG D   C VL  I +QSPDI QGV     K+ EE GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  N   PWLRPD K Q+T+ Y  E+G  V   +  V++STQHD  +   ++   ++E ++KPV+P K+L + T FH
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSLLPWLRPDAKAQITLRY--EDG--VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFH 226          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_XYLFM (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain M12) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.584e-55
Identity = 114/233 (48.93%), Postives = 155/233 (66.52%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRK--NGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            M ++LFTSESV+EGHPDK+ DQISDA+LDA L QDP ++VACET  KT + ++ GEITT A V+ E + R    +IG+ S DVG D   C VL  I +QSPDI QGV     K+ EE GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  N   PWLRPD K Q+T+ Y  E+G  V   +  V++STQHD  +   ++   ++E ++KPV+P K+L + T FH
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSPLPWLRPDAKAQITLRY--EDG--VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFH 226          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_RALEH5.041e-5552.47S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_PSYCK5.041e-5549.34S-adenosylmethionine synthetase OS=Psychrobacter c... [more]
METK_MANSM5.041e-5550.44S-adenosylmethionine synthetase OS=Mannheimia succ... [more]
METK_JANMA5.041e-5549.78S-adenosylmethionine synthetase OS=Janthinobacteri... [more]
METK_DESMR5.041e-5549.33S-adenosylmethionine synthetase OS=Desulfovibrio m... [more]
METK_DESAD5.041e-5549.33S-adenosylmethionine synthetase OS=Desulfovibrio s... [more]
METK_CORA75.041e-5553.07S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_CLAM35.041e-5552.47S-adenosylmethionine synthetase OS=Clavibacter mic... [more]
METK_XYLFT6.584e-5548.93S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_XYLFM6.584e-5548.93S-adenosylmethionine synthetase OS=Xylella fastidi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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