DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LEIXX (S-adenosylmethionine synthetase OS=Leifsonia xyli subsp. xyli GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.268e-54
Identity = 119/222 (53.60%), Postives = 142/222 (63.96%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI-------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI 734
            LFTSESV EGHPDK+CDQISD+ILDA L  D  S+VA ET   T LV V GE+TTK  V    +VRDT   IG+ S DV  D   C V V I  QSPDIAQGV   L  R E         GAGDQG MFG+AT ETP++MPL   LA +L  +L  VRK+GT  +LRPDGKTQVT+ Y       VP  V TV++STQH   + + ++ AD+ E VI+PV+
Sbjct:    6 LFTSESVTEGHPDKICDQISDSILDALLAVDEHSRVAVETLVTTGLVHVAGEVTTKGYVEIPALVRDTIVEIGYDSSDVSFDGTQCGVSVSIGAQSPDIAQGVDNALETRSERSQDDLDRQGAGDQGIMFGFATTETPQYMPLPIWLAHRLAERLAAVRKDGTLGYLRPDGKTQVTIGY----EGYVPKSVQTVVLSTQHARDIPSQQLRADVIEQVIEPVM 223          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SYNFM (S-adenosylmethionine synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=metK PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.574e-54
Identity = 113/229 (49.34%), Postives = 148/229 (64.63%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 761
            +M  FLFTSESV EGHPDK+ DQISD+ILDA + +D  ++VACET   T L  V GEITT + V+   I+R T + IG+    +G D   C V+  I++QSPDIAQGV+       EE GAGDQG MFG+A +ETP FMP+    A ++  KL EVRKNG   +LRPDGK+QVTVEY +      P R+ T++++ QH   V+   I   + E VIK V P + +D+KT
Sbjct:    2 SMSNFLFTSESVTEGHPDKVADQISDSILDAIITEDKTARVACETLVTTGLAFVAGEITTSSWVDIPDIIRSTIKGIGYNDSSMGFDWSTCAVITSIDKQSPDIAQGVNPG-EGLFEEQGAGDQGLMFGFACNETPVFMPMPIYYAHRITRKLAEVRKNGVLEFLRPDGKSQVTVEYDDHR----PKRIDTIVVAAQHAPNVSYSMIRESIIEEVIKKVFPPELIDDKT 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_STRAW (S-adenosylmethionine synthetase OS=Streptomyces avermitilis GN=metK PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.574e-54
Identity = 120/225 (53.33%), Postives = 144/225 (64.00%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPE-------EIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKP 728
            M   LFTSESV EGHPDK+ DQISD ILDA L +DP S+VA ET   T LV V GE+TTKA     ++VRD    IG+ S   G D  +C V V I  QSPDIAQGV      R E         GAGDQG MFGYATDETP  MPL   LA +L  +L+EVRKNGT P+LRPDGKTQVT+EY  +      VR+ TV++S+QH   +  D  +A D++E V++P
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYAPIAQLVRDKILEIGYDSSKKGFDGASCGVSVSIGSQSPDIAQGVDTAYENRVEGDEDELDRQGAGDQGLMFGYATDETPTLMPLPIHLAHRLSHRLSEVRKNGTIPYLRPDGKTQVTIEYDGDKA----VRLDTVVVSSQHASDIDLDSLLAPDIREFVVEP 221          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DESVM (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metK PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.574e-54
Identity = 113/228 (49.56%), Postives = 148/228 (64.91%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL-DEKTIF 767
            + FTSESV EGHPDK+ DQISDA+LD  L QDP S+VACET   T +  + GEI TK   +  ++VR T RNIG+ S ++G D   C V+  I++QS DIAQGV       PE+ GAGDQG MFG+A DETP  MP     A QL  +LT+VRK+G   +LRPDGKTQV+ EY +      PV ++ V++S+QH + V+ND I   + E VI+  +PE  + D+  IF
Sbjct:    8 YFFTSESVTEGHPDKVADQISDAVLDVLLAQDPMSRVACETLVTTGMAFIAGEIRTKGFADLPEVVRSTIRNIGYNSSEMGFDWKTCAVISSIDKQSGDIAQGVD---RGNPEDQGAGDQGMMFGFACDETPTLMPAPIYWAHQLSQRLTQVRKDGILDFLRPDGKTQVSFEYVDGK----PVHINNVVVSSQHADNVSNDTIREGIIEEVIRKTLPEGLMADDCEIF 228          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LEPBL (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.279e-54
Identity = 116/225 (51.56%), Postives = 149/225 (66.22%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 749
            +++ F+FTSESV EGHPDK+CDQISDAILDA LEQDP S+VACET   TNLV++ GEIT+K  V+ ++I R+  R+IG+    +G DAD   V  ++  QSPDI+QGV        E+ GAGDQG MFG+A +ETPEFMP+    + +L   L  +R +    +LRPD K+QVTVEY +      PVRV TV+ISTQH   V + +I   L E  IK VIP   L
Sbjct:    2 SLKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ-GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSNKLKFLRPDAKSQVTVEYKDGK----PVRVDTVVISTQHSPDVAHKQIEESLIEECIKKVIPANLL 221          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_LEPBJ (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.279e-54
Identity = 116/225 (51.56%), Postives = 149/225 (66.22%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 749
            +++ F+FTSESV EGHPDK+CDQISDAILDA LEQDP S+VACET   TNLV++ GEIT+K  V+ ++I R+  R+IG+    +G DAD   V  ++  QSPDI+QGV        E+ GAGDQG MFG+A +ETPEFMP+    + +L   L  +R +    +LRPD K+QVTVEY +      PVRV TV+ISTQH   V + +I   L E  IK VIP   L
Sbjct:    2 SLKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ-GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSNKLKFLRPDAKSQVTVEYKDGK----PVRVDTVVISTQHSPDVAHKQIEESLIEECIKKVIPANLL 221          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.279e-54
Identity = 109/224 (48.66%), Postives = 148/224 (66.07%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 749
            M  +LFTSESV EGHPDK+ DQISDAILDA L QD  S+VA ET   T LV++ GEITT ANV+Y ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV+        + GAGDQG MFGYA DETP  MPL   L+ ++  +   +RK+G  PW RPD K+QVT+ Y +      P  + TV++STQH   ++ +++     E +IKPV+P++ +
Sbjct:    1 MSDYLFTSESVGEGHPDKVADQISDAILDAILAQDKHSRVAAETLCNTGLVVLAGEITTNANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGVNAAYDDNLGQ-GAGDQGLMFGYACDETPSLMPLPIYLSHRMVERQAMLRKDGRLPWARPDAKSQVTIRYVDGK----PHSIDTVVLSTQHSPDISLEDLREATIEQIIKPVLPKELI 219          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CYAA5 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain ATCC 51142) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.279e-54
Identity = 116/231 (50.22%), Postives = 153/231 (66.23%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV----TND----EIAADLKEHVIKPVI 734
            +LFTSESV EGHPDK+CDQISD I+D  L  D  S+VA E    T LV++ GE+T+KANVN+ ++ R     IG+ + D G  A++C VLV +++QSPDIAQGV     +R        ++IGAGDQG MFGYA +ETPE MPL   LA +   +L  VRK G   +LRPDGKTQV++ Y  E+G  +PV + T+LISTQHDET+     ND    +I +DL + V+ PV+
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTIIDTLLYHDDQSRVAAEVVVNTGLVLITGEVTSKANVNFVELARKKIAEIGYTNADNGFSANSCAVLVALDEQSPDIAQGVTQAHEQRQALSDDELDQIGAGDQGIMFGYACNETPELMPLPISLAHRFSRRLAAVRKTGDLGYLRPDGKTQVSIVY--EDG--IPVGIDTILISTQHDETIDSITDNDGVQAKIKSDLWDAVVLPVL 231          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_CHRVO (S-adenosylmethionine synthetase OS=Chromobacterium violaceum GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.279e-54
Identity = 110/230 (47.83%), Postives = 150/230 (65.22%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            M  +LFTSESV+EGHPDK+ DQISDAILDA L +D  ++VA ET   T LV++ GEITT ANV+Y KI R+T + IG+   ++G D   C V+   ++QSPDIAQGV+        + GAGDQG MFGYA DETP  MP     A +L  +  E+RK+G  PWLRPD K+Q+T  Y    G  +P R+ TV++STQH   + +  ++  + E ++KPV+P + +  +T F
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQISDAILDAILREDKHARVAAETLVNTGLVVLAGEITTTANVDYIKIARETIKRIGYDDSELGFDFRGCAVMACYDKQSPDIAQGVNEGEGLDLNQ-GAGDQGLMFGYACDETPTLMPFPIYYAHRLVQRQAELRKDGRLPWLRPDAKSQITCVYDAATG--LPKRIDTVVLSTQHSPDIDHKTLSEAVIEDIVKPVLPPEMITPETKF 227          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_TRIEI (S-adenosylmethionine synthetase OS=Trichodesmium erythraeum (strain IMS101) GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.507e-54
Identity = 118/233 (50.64%), Postives = 151/233 (64.81%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH----DETVTNDEIAADLKEHVIKPVIPEKYLD 752
            +LFTSESV EGHPDK+CDQISD I+DA L QDP S+VA E    T LV++ GEITTKA VNY ++ R    +IG+V  + G  AD+C VLV +++QS DIAQGV      R        + +GAGDQG MFG+A +ETPE MPL   LA ++  +LT VRK G  P+LRPDGK+QVT+ Y  E+G   PV + T+LISTQH     E     +I A +KE + K V+   + D
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTIIDAILAQDPQSRVAAEVVVNTGLVLITGEITTKAQVNYIELARKKIADIGYVHAENGFSADSCSVLVALDEQSADIAQGVDKAQETRELLSEEELDAVGAGDQGLMFGFACNETPELMPLPISLAHRVCRQLTAVRKTGQLPYLRPDGKSQVTITY--EDGR--PVGIDTILISTQHTAKIGEITELSDIQAKIKEDLWKYVVEPIFKD 233          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEIXX4.268e-5453.60S-adenosylmethionine synthetase OS=Leifsonia xyli ... [more]
METK_SYNFM5.574e-5449.34S-adenosylmethionine synthetase OS=Syntrophobacter... [more]
METK_STRAW5.574e-5453.33S-adenosylmethionine synthetase OS=Streptomyces av... [more]
METK_DESVM5.574e-5449.56S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_LEPBL7.279e-5451.56S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_LEPBJ7.279e-5451.56S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_DECAR7.279e-5448.66S-adenosylmethionine synthetase OS=Dechloromonas a... [more]
METK_CYAA57.279e-5450.22S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_CHRVO7.279e-5447.83S-adenosylmethionine synthetase OS=Chromobacterium... [more]
METK_TRIEI9.507e-5450.64S-adenosylmethionine synthetase OS=Trichodesmium e... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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