DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:13..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.898e-86
Identity = 155/232 (66.81%), Postives = 184/232 (79.31%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSK-RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            M ++LFTSESV EGHPDK+CDQ+SDA+LDACL QDP SKVACET TKT +VM+ GEITTKANV+Y+K+VR+  + IG+     G D   C VLV IEQQSPDIAQGVH  + K  PE+IGAGDQGHMFGYAT+ETP  MPL+H LA++L  KLTE+R NGT  W RPD KTQVTVEY  E   + PVRVHT++ISTQHDE VTN++I ADLKE VIK V+P +YLD+ TI+H
Sbjct:    1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMILGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGVH--IGKVNPEDIGAGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTVEYKKEGHKITPVRVHTIVISTQHDEKVTNEQIRADLKELVIKAVVPAQYLDDNTIYH 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.565e-83
Identity = 146/230 (63.48%), Postives = 180/230 (78.26%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            +T LFTSE V+E HPDKLCDQ+SDAILDACL  DP SKVACET +KT +VMVFGEITTK++ +Y+K++R+T + IGF    +G D   C +LV IEQQSPDIAQGVH  + +  +++GAGDQGHMFG+AT+ETPEFMP++HVLAT+L  ++TEVR N    W+RPD KTQVTVEY NENG ++P+R HTV+IS QH E VTN+EI   L E VIKP IP   LD +TIFH
Sbjct:    5 KTLLFTSECVSESHPDKLCDQVSDAILDACLANDPYSKVACETASKTGMVMVFGEITTKSSFDYQKVIRETVKRIGFTDSSIGFDYKTCNILVAIEQQSPDIAQGVH--VGRSDDDLGAGDQGHMFGHATNETPEFMPMTHVLATRLCQRMTEVRNNSILSWMRPDAKTQVTVEYRNENGTLIPLRRHTVVISVQHSEDVTNEEIRKRLMEEVIKPSIPAHLLDGETIFH 232          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 147/229 (64.19%), Postives = 181/229 (79.04%), Query Frame = 3
Query:   84 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+H
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYH 243          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 147/229 (64.19%), Postives = 181/229 (79.04%), Query Frame = 3
Query:   84 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+H
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYH 243          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 147/229 (64.19%), Postives = 181/229 (79.04%), Query Frame = 3
Query:   84 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+H
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYH 243          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 1.078e-81
Identity = 146/229 (63.76%), Postives = 181/229 (79.04%), Query Frame = 3
Query:   84 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A ++Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+H
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYH 243          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.136e-81
Identity = 144/229 (62.88%), Postives = 181/229 (79.04%), Query Frame = 3
Query:   84 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            TFLFTSESV EGHPDK+CDQI+DA+LDA L+QDPD+KVACET  KT ++++ GEIT++A ++Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE +IK V+P KYLDE TI+H
Sbjct:   17 TFLFTSESVGEGHPDKICDQINDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEEVCLDEMRDALKEKLIKAVVPAKYLDEDTIYH 243          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 8.539e-79
Identity = 135/230 (58.70%), Postives = 183/230 (79.57%), Query Frame = 3
Query:   81 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            +TFLFTSESV EGHPDK+CDQISDAILDACL+ DP SKVACET +KT +VMVFGEITT++ ++Y+K++R+T ++IG+   + G D   C VLV IEQQSPDIAQG+  H  K  EE+GAGDQG MFGYATDETPE +PL+ +LA +L A ++  R++G+ PWLRPD KTQVT+EY  ENGA++P RV T+++S QH ++++ +++ +++ E +IKP +P   LDEKT++H
Sbjct:    3 QTFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRSQIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSISTEDLRSEILEKIIKPTVPAHLLDEKTVYH 230          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.485e-78
Identity = 138/229 (60.26%), Postives = 178/229 (77.73%), Query Frame = 3
Query:   84 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            +FLFTSESV EGHPDK+ DQ+SDA+LDACL +DP SKVACET TKT ++MVFGEITTKA+++Y+KI+R+  ++IG+     G D   C VLV IEQQSPDIAQG+H    K  EE+GAGDQG MFGYATDETPE +PL+ +LA QL A + + R++G+ PWLRPD KTQVT+EY ++ GA+VP +V TV++S QH E +T +E+  ++ E +IK  IP KYLDE T+FH
Sbjct:   13 SFLFTSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGLH--YEKALEELGAGDQGIMFGYATDETPELLPLTLLLAHQLNANMAKARRDGSLPWLRPDTKTQVTIEYEHDGGAVVPKKVKTVVVSAQHSEDITTEELRKEILEKIIKTTIPAKYLDEDTVFH 239          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 5.535e-78
Identity = 138/232 (59.48%), Postives = 178/232 (76.72%), Query Frame = 3
Query:   75 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            N  TFLFTSESV EGHPDK+ DQ+SDAILDACL +DP SKVACET TKT ++MVFGEITTKA ++Y+K+VR+  ++IG+     G D   C +LV IE+QSPDIAQG+  HL  R E +GAGDQG MFGYATDETPE  PL+ + A +L A ++  R++G+ PWLRPD KTQVT+EY ++NGA+VP+RV TV++S QH   +T +E+  ++ E +IK  IP KYLDEKT++H
Sbjct:   13 NEGTFLFTSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGL--HLDDRLENLGAGDQGIMFGYATDETPELFPLTLLFAHKLNAAMSAARRDGSLPWLRPDTKTQVTIEYKHDNGAVVPLRVDTVVVSAQHAPEITTEELRKEILEKIIKTTIPAKYLDEKTVYH 242          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DICDI1.898e-8666.81S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_ACACA2.565e-8363.48S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK2_PONAB8.252e-8264.19S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA8.252e-8264.19S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN8.252e-8264.19S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE1.078e-8163.76S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_RAT3.136e-8162.88S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_SCHPO8.539e-7958.70S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK_ASCIM2.485e-7860.26S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK_NEUCR5.535e-7859.48S-adenosylmethionine synthetase OS=Neurospora cras... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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