DY262461

Overview
NameDY262461
Unique NameDY262461
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1328
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: KPCI_PONAB (Protein kinase C iota type OS=Pongo abelii GN=PRKCI PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 5.776e-19
Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKE-GRARTEREILELL-DHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDL 696
            IG G    V L  LK  D        ++A KV+ KKEL +  ++    +TE+ + E   +HPFL  L++   ++  L  + E+  GGDL    QRQR  +  E   RFY++E+ +AL YLH  GI+YRDLK +NVL+ S+GHI LTD+ +
Sbjct:  260 IGRGSYAKVLLVRLKKTDR-------IYAMKVV-KKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 399          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: KPCI_MOUSE (Protein kinase C iota type OS=Mus musculus GN=Prkci PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 5.776e-19
Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKE-GRARTEREILELL-DHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDL 696
            IG G    V L  LK  D        ++A KV+ KKEL +  ++    +TE+ + E   +HPFL  L++   ++  L  + E+  GGDL    QRQR  +  E   RFY++E+ +AL YLH  GI+YRDLK +NVL+ S+GHI LTD+ +
Sbjct:  259 IGRGSYAKVLLVRLKKTDR-------IYAMKVV-KKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 398          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: KPCI_HUMAN (Protein kinase C iota type OS=Homo sapiens GN=PRKCI PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 5.776e-19
Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKE-GRARTEREILELL-DHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDL 696
            IG G    V L  LK  D        ++A KV+ KKEL +  ++    +TE+ + E   +HPFL  L++   ++  L  + E+  GGDL    QRQR  +  E   RFY++E+ +AL YLH  GI+YRDLK +NVL+ S+GHI LTD+ +
Sbjct:  260 IGRGSYAKVLLVRLKKTDR-------IYAMKVV-KKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 399          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: KGP25_DROME (cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 OS=Drosophila melanogaster GN=for PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 5.776e-19
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  232 DIRFSLRIGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLK 705
            D+R    +G G  G V L +     S+S      FA K M K ++    ++    +E+EI+   +  F+  L+ +   +++L +L E C GG+L  + + + N  FD++  RFY + VV A +YLH   I+YRDLKPEN+L+   G++ L DF  + K
Sbjct:  622 DLRVIATLGVGGFGRVELVQTNGDSSRS------FALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIVKLFKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDSTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLNERGYVKLVDFGFAKK 771          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: KGP24_DROME (cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B OS=Drosophila melanogaster GN=for PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 5.776e-19
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  232 DIRFSLRIGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLK 705
            D+R    +G G  G V L +     S+S      FA K M K ++    ++    +E+EI+   +  F+  L+ +   +++L +L E C GG+L  + + + N  FD++  RFY + VV A +YLH   I+YRDLKPEN+L+   G++ L DF  + K
Sbjct:  776 DLRVIATLGVGGFGRVELVQTNGDSSRS------FALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIVKLFKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDSTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLNERGYVKLVDFGFAKK 925          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: KDC1_DROME (Protein kinase DC1 OS=Drosophila melanogaster GN=Pka-C2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.776e-19
Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 723
            +G+G  G+V L   K+         + +AAK+M K++L    +      E+ +L     PFL  L  S     +L L+     GG+L    +R R  +F+E   RFYA++V +ALEY+H + ++YRDLKPEN+L+   G+I +TDF  + + D   S
Sbjct:   51 LGNGSFGTVMLVREKS-------GKNYYAAKMMSKEDLVRLKQVAHVHNEKHVLNAARFPFLIYLVDSTKCFDYLYLILPLVNGGELFSYHRRVR--KFNEKHARFYAAQVALALEYMHKMHLMYRDLKPENILLDQRGYIKITDFGFTKRVDGRTS 198          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: AKT2A_XENLA (RAC-beta serine/threonine-protein kinase A OS=Xenopus laevis GN=akt2-A PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.776e-19
Identity = 53/155 (34.19%), Postives = 80/155 (51.61%), Query Frame = 1
Query:  232 DIRFSLRIGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDL 696
            D  +   +G G  G V L   K            +A K++ K+ + ++ +     TE  +L+   HPFL  L  +  +   LC + E+  GG+L     R+R   F E   RFY +E+V ALEYLH   +VYRD+K EN+++  DGH+ +TDF L
Sbjct:  156 DFDYLKLLGKGTFGKVILVREKA-------TGRYYAMKILRKEVIIAKDEVAHTLTESRVLQNTKHPFLTALKYAFQTSDRLCFVMEYANGGELFFHLSRERV--FTEDRARFYGAEIVSALEYLHSRNVVYRDIKLENLMLDKDGHVKITDFGL 301          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: TRC_DROPS (Serine/threonine-protein kinase tricorner OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.544e-19
Identity = 50/148 (33.78%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDL 696
            IG G  G V L + K+          ++A KV+ K ++  + +    R ER++L   DH ++  +Y S   Q  L L+ EF PGGD+  L  ++      E   +FY SE  +A++ +H LG ++RD+KP+N+L+ + GH+ L+DF L
Sbjct:   98 IGRGAFGEVRLVQKKD-------TGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQDQVNLYLIMEFLPGGDMMTLLMKKDT--LSEEGTQFYISETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGL 236          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: MRCKA_HUMAN (Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens GN=CDC42BPA PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.544e-19
Identity = 55/151 (36.42%), Postives = 87/151 (57.62%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLK 705
            IG G  G V + +LKN D        +FA K+++K E+  R++    R ER++L   D+ ++ TL+ +      L L+ ++  GGDL  L  +  + R  E   RFY +E+VIA++ +H L  V+RD+KP+N+L+  +GHI L DF   LK
Sbjct:   83 IGRGAFGEVAVVKLKNADK-------VFAMKILNKWEMLKRAETACFREERDVLVNGDNKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 225          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: KS6B1_RAT (Ribosomal protein S6 kinase beta-1 OS=Rattus norvegicus GN=Rps6kb1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.544e-19
Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKE-GRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 735
            +G G  G V+      +     N   +FA KV+ K  +   +K+    + ER ILE + HPF+  L  +  +   L L+ E+  GG+L +  Q +R   F E    FY +E+ +AL +LH  GI+YRDLKPEN+++   GH+ LTDF L   C +S  +  +
Sbjct:   97 LGKGGYGKVFQV----RKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM--QLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL---CKESIHDGTV 249          
The following BLAST results are available for this feature:
BLAST of DY262461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
KPCI_PONAB5.776e-1940.00Protein kinase C iota type OS=Pongo abelii GN=PRKC... [more]
KPCI_MOUSE5.776e-1940.00Protein kinase C iota type OS=Mus musculus GN=Prkc... [more]
KPCI_HUMAN5.776e-1940.00Protein kinase C iota type OS=Homo sapiens GN=PRKC... [more]
KGP25_DROME5.776e-1933.54cGMP-dependent protein kinase, isozyme 2 forms cD5... [more]
KGP24_DROME5.776e-1933.54cGMP-dependent protein kinase, isozyme 2 forms cD4... [more]
KDC1_DROME5.776e-1934.39Protein kinase DC1 OS=Drosophila melanogaster GN=P... [more]
AKT2A_XENLA5.776e-1934.19RAC-beta serine/threonine-protein kinase A OS=Xeno... [more]
TRC_DROPS7.544e-1933.78Serine/threonine-protein kinase tricorner OS=Droso... [more]
MRCKA_HUMAN7.544e-1936.42Serine/threonine-protein kinase MRCK alpha OS=Homo... [more]
KS6B1_RAT7.544e-1934.57Ribosomal protein S6 kinase beta-1 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262461 ID=DY262461; Name=DY262461; organism=Citrus clementina; type=EST; length=1328bp
CTCTCTTTCTCTCTCTGCAGTTCAATGGAGCCATGGCTCGACGACTTATC
CGACGATTTACAGAGCGTGAGTTTCACGTCCACGAACACGACCGCCACAA
CGATCAACCGCAGCACAAGCTCGGGCTCCTTCGACGCCACCGCCTCACTC
ACCCCGGCTCCCTCCGCTCACAGCTCCTTCTCCTCCAAACCCAAATCCAC
CACTACAACAACTCACTCTCTCTCCTTCTCCGACATCCGCTTCTCCCTCC
GCATCGGCTCCGGCGACATCGGCTCCGTCTACTTAACCGAGCTCAAAAAC
CAAGACAGCAAAAGCATTAACAACAACTCTCTCTTCGCCGCTAAAGTGAT
GGACAAAAAAGAACTCGCTTCGAGAAGCAAAGAAGGCAGAGCAAGGACTG
AGCGGGAAATTCTGGAACTGTTGGACCATCCATTTTTGCCCACGCTTTAC
GCCAGTATAGACTCGCAGAGGTGGCTCTGTTTGTTAACGGAGTTCTGCCC
CGGCGGTGACCTCCACGTCCTCCGTCAACGCCAGCGTAATAAACGGTTCG
ATGAAGCCGCCGTCAGATTCTACGCATCGGAGGTGGTGATAGCGCTAGAA
TACCTTCACATGTTGGGAATTGTCTACCGTGATCTGAAGCCAGAAAATGT
GCTCGTTCGATCAGACGGACACATTATGCTAACGGACTTTGATCTGTCGT
TAAAATGTGATGATTCTGCATCAAATGCTCAGATTATTTCTGATCAAAAC
CCACCAATTGTGGTCCTACAAAATGAGTATCTAGTTGATCATCCTCCATT
CACATCCGCTTCATGCATTATTCCAAATTGCATTGTCCCTGCCGTGTCAT
GTTTTCGACCCAAGCGCANGCGGAAAAAGAAGACGGGCCAGCATAGTGGG
CCTGAATTTGTAGTCGAACCTGTTGATGTCCGGTCCATGTCATTTGTTGG
GACCACGAGTATTTGGCGCCGGAGATTGTGTCCGGTGAGGGTCATGGAAG
TCCTGGGGATTGGTGACACTAGGGGATATTTTATCCAACTATTTTATGGG
GTGACCCCCTTTAAGGGTGGGGACCACGAGCTAACTCTAGCTAAAATCCT
CCCCTCGAGCCCCTCAGTTTCCCAAGGGAACCGGGCCGGGGCCGCCCCGC
GGCAAAGGGCCCTGATTCTCCCAAAAAATATGGGCCAAGGGATCCGCAAA
AAGGGGGATAGGGGGGCCCCCAAAAGGGGGGCGGGCGCGGGCAAACCAAA
AACCCCACCCCCATTTTTTTTTTAGGGGGGGGGGAAAAAATGTGGGGGGG
GATGTGGGGAGGAAGGAAAAAGAAGCCC
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