DY262461

Overview
NameDY262461
Unique NameDY262461
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1328
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: NEK6_ORYSJ (Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica GN=NEK6 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.790e-11
Identity = 48/162 (29.63%), Postives = 83/162 (51.23%), Query Frame = 1
Query:  250 RIGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGR--ARTEREILELLDHPFLPTLYAS-IDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLS-LKCDDSAS 723
            +IG G  GS YL   K +  +           VM K  L+ ++ + +  A  E  ++  L +P++       +D     C++T +C GGD+    ++ R   F E  V  + +++++AL+YLH   +++RDLK  N+L+  D +I L DF L+ L  +D AS
Sbjct:    9 QIGRGAYGSAYLVVHKGERKRY----------VMKKIRLSKQNDKFQRTAYQEMSLMASLSNPYIVEYKDGWVDEGTSACIVTSYCEGGDMAERIKKARGVLFSEERVCRWFTQLLLALDYLHCNRVLHRDLKCSNILLTKDNNIRLADFGLAKLLMEDLAS 160          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: NEK4_ORYSJ (Serine/threonine-protein kinase Nek4 OS=Oryza sativa subsp. japonica GN=NEK4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.790e-11
Identity = 47/164 (28.66%), Postives = 84/164 (51.22%), Query Frame = 1
Query:  250 RIGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGR--ARTEREILELLDHPFLPTLY-ASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDL--SLKCDDSASN 726
            ++G G  G+  L   K +  K           V+ K  LA +++  R  A  E  ++  L HP++     A ++   ++C++T +C GGD+  L ++     F E  +  + +++V+A++YLH   +++RDLK  N+ +  D  I L DF L  +LK DD  S+
Sbjct:   13 QVGRGAFGAAILVNHKIERKKY----------VLKKIRLARQTERCRKSAHQEMALIARLQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMDELMKKLNGTYFPEEKLLKWFAQLVLAVDYLHSNYVLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKEDDLTSS 166          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.790e-11
Identity = 44/149 (29.53%), Postives = 77/149 (51.68%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLS 699
            +G G  G V + E      K        A K+++++++ +   E + R E +IL L  HP +  LY  I++   + L+ E+   G+L      +   + DEA  R +  +++  +EY H   +V+RDLKPEN+L+ S  ++ + DF LS
Sbjct:   48 LGIGSFGRVKIAEHALTGHK-------VAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLVMEYVNSGELFDYIVEKGRLQEDEA--RNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLS 187          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: CIPKU_ORYSJ (CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.790e-11
Identity = 40/149 (26.85%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLS 699
            +G G    VY        +  +      A KV DK+ +       + + E +++  + H  +  L+  + ++  +  + E+  GG+L    +  R+ RF E   R Y  +++ A+E+ H  G+ +RDLKPEN+L+ + G + +TDF LS
Sbjct:   23 LGRGTFAKVY-------KAYKLATGEAVAIKVFDKEAVQRSGTVEQVKREVDVMRRVHHRHVIRLHEVMATRSRIYFVMEYASGGELFT--RLSRSPRFPEPVARRYFQQLITAVEFCHSRGVYHRDLKPENLLLDARGDLKVTDFGLS 162          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: CIPKQ_ORYSJ (CBL-interacting protein kinase 26 OS=Oryza sativa subsp. japonica GN=CIPK26 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.790e-11
Identity = 38/150 (25.33%), Postives = 79/150 (52.67%), Query Frame = 1
Query:  250 RIGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLS 699
            ++G G+   VY        ++++ +    A K++DK+++       + + E  I+ L+ HP +  L+  + S+  +  + E+  GG+L    ++    +F E   R Y  +++  ++Y H  G+ +RDLKPEN+L+  +  + ++DF LS
Sbjct:   17 QLGQGNFAKVYY-------ARNLTSGQAVAIKMIDKEKVTRVGLMVQIKREISIMRLVKHPNILQLFEVMASKSKIYFVLEYAKGGELF---KKISKGKFSEDVARRYFHQLISGIDYCHSRGVYHRDLKPENLLLDENESLKVSDFGLS 156          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: CIPKH_ORYSJ (CBL-interacting protein kinase 17 OS=Oryza sativa subsp. japonica GN=CIPK17 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.790e-11
Identity = 45/149 (30.20%), Postives = 77/149 (51.68%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLS 699
            +G G+ G V       + ++ +     FA K++D+  + S     + R E   L+LL HP +  L+    S+  + ++ EF  GG+L   R   + K  ++   R +  +++  + Y H  G+ +RDLKPENVLV   G+I ++DF LS
Sbjct:   19 LGEGNFGKV-------KYARHLATGGHFAVKILDRGRVVSLRAGDQIRREIATLKLLRHPHVVRLHEVAASKTKIYMVLEFVNGGELFE-RIAVKGKLSEKEGRRLF-QQLIDGVSYCHDRGVYHRDLKPENVLVDQKGNIKISDFGLS 158          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: WIN1_SCHPO (MAP kinase kinase kinase win1 OS=Schizosaccharomyces pombe GN=win1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.561e-11
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAK-VMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 723
            IGSG  G+VY        + +++   L A K V   K   SR    R + E  +LEL DHP + + Y     +  + +  E C G  L    +  R +  DE  ++ Y  +++  L Y+H  G+ ++D+KPEN+L   +G +  TDF  S K   SAS
Sbjct: 1126 IGSGSFGTVYR-------AVNLDTGDLMAVKEVALHKPRISRPMIKRIKGEMLVLELFDHPNVVSYYGIEVHREKVNIFMELCQGSSLFEFLRYGRIE--DELVIQVYVLQLLEGLAYIHSCGVSHQDVKPENILFDHNGIMKFTDFG-SAKMSGSAS 1273          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: NRKA_TRYBB (Putative serine/threonine-protein kinase A OS=Trypanosoma brucei brucei GN=NRKA PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.561e-11
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHV---LRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 723
            +G G  G  Y+ E       S+ + SL  AKVMD  +++ R K   A++E + L   +HP +       +    L ++ EF   G+L     LR     + F E    F   ++ +AL+Y+H   +++RD+K  NVL+ S G + L DF  S + +D+ S
Sbjct:   26 VGLGSYGEAYVAE-------SVEDGSLCVAKVMDLSKMSQRDKR-YAQSEIKCLANCNHPNIIRYIEDHEENDRLLIVMEFADSGNLDEQIKLRGSGDARYFQEHEALFLFLQLCLALDYIHSHKMLHRDIKSANVLLTSTGLVKLGDFGFSHQYEDTVS 177          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 7.561e-11
Identity = 46/149 (30.87%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  253 IGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLS 699
            IG G+   V L       ++ I      A K++DK +L   S +   R  R I+++L+HP +  L+  I++++ L L+ E+  GG++          +  EA  +F   ++V A++Y H   IV+RDLK EN+L+ +D +I + DF  S
Sbjct:   62 IGKGNFAKVKL-------ARHILTGREVAIKIIDKTQLNPTSLQKLFREVR-IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 200          
BLAST of DY262461 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.561e-11
Identity = 46/154 (29.87%), Postives = 80/154 (51.95%), Query Frame = 1
Query:  238 RFSLRIGSGDIGSVYLTELKNQDSKSINNNSLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYASIDSQRWLCLLTEFCPGGDLHVLRQRQRNKRFDEAAVRFYASEVVIALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLS 699
            R    IG G+   V L       ++ +      A K++DK +L   S +   R  R I+++L+HP +  L+  I++++ L L+ E+  GG++          +  EA  +F   ++V A++Y H   IV+RDLK EN+L+ +D +I + DF  S
Sbjct:   61 RLQKTIGKGNFAKVKL-------ARHVLTGREVAVKIIDKTQLNPTSLQKLFREVR-IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFS 204          
The following BLAST results are available for this feature:
BLAST of DY262461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
NEK6_ORYSJ5.790e-1129.63Serine/threonine-protein kinase Nek6 OS=Oryza sati... [more]
NEK4_ORYSJ5.790e-1128.66Serine/threonine-protein kinase Nek4 OS=Oryza sati... [more]
KIN10_ARATH5.790e-1129.53SNF1-related protein kinase catalytic subunit alph... [more]
CIPKU_ORYSJ5.790e-1126.85CBL-interacting protein kinase 30 OS=Oryza sativa ... [more]
CIPKQ_ORYSJ5.790e-1125.33CBL-interacting protein kinase 26 OS=Oryza sativa ... [more]
CIPKH_ORYSJ5.790e-1130.20CBL-interacting protein kinase 17 OS=Oryza sativa ... [more]
WIN1_SCHPO7.561e-1131.65MAP kinase kinase kinase win1 OS=Schizosaccharomyc... [more]
NRKA_TRYBB7.561e-1130.00Putative serine/threonine-protein kinase A OS=Tryp... [more]
MARK3_MOUSE7.561e-1130.87MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
MARK1_RAT7.561e-1129.87Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262461 ID=DY262461; Name=DY262461; organism=Citrus clementina; type=EST; length=1328bp
CTCTCTTTCTCTCTCTGCAGTTCAATGGAGCCATGGCTCGACGACTTATC
CGACGATTTACAGAGCGTGAGTTTCACGTCCACGAACACGACCGCCACAA
CGATCAACCGCAGCACAAGCTCGGGCTCCTTCGACGCCACCGCCTCACTC
ACCCCGGCTCCCTCCGCTCACAGCTCCTTCTCCTCCAAACCCAAATCCAC
CACTACAACAACTCACTCTCTCTCCTTCTCCGACATCCGCTTCTCCCTCC
GCATCGGCTCCGGCGACATCGGCTCCGTCTACTTAACCGAGCTCAAAAAC
CAAGACAGCAAAAGCATTAACAACAACTCTCTCTTCGCCGCTAAAGTGAT
GGACAAAAAAGAACTCGCTTCGAGAAGCAAAGAAGGCAGAGCAAGGACTG
AGCGGGAAATTCTGGAACTGTTGGACCATCCATTTTTGCCCACGCTTTAC
GCCAGTATAGACTCGCAGAGGTGGCTCTGTTTGTTAACGGAGTTCTGCCC
CGGCGGTGACCTCCACGTCCTCCGTCAACGCCAGCGTAATAAACGGTTCG
ATGAAGCCGCCGTCAGATTCTACGCATCGGAGGTGGTGATAGCGCTAGAA
TACCTTCACATGTTGGGAATTGTCTACCGTGATCTGAAGCCAGAAAATGT
GCTCGTTCGATCAGACGGACACATTATGCTAACGGACTTTGATCTGTCGT
TAAAATGTGATGATTCTGCATCAAATGCTCAGATTATTTCTGATCAAAAC
CCACCAATTGTGGTCCTACAAAATGAGTATCTAGTTGATCATCCTCCATT
CACATCCGCTTCATGCATTATTCCAAATTGCATTGTCCCTGCCGTGTCAT
GTTTTCGACCCAAGCGCANGCGGAAAAAGAAGACGGGCCAGCATAGTGGG
CCTGAATTTGTAGTCGAACCTGTTGATGTCCGGTCCATGTCATTTGTTGG
GACCACGAGTATTTGGCGCCGGAGATTGTGTCCGGTGAGGGTCATGGAAG
TCCTGGGGATTGGTGACACTAGGGGATATTTTATCCAACTATTTTATGGG
GTGACCCCCTTTAAGGGTGGGGACCACGAGCTAACTCTAGCTAAAATCCT
CCCCTCGAGCCCCTCAGTTTCCCAAGGGAACCGGGCCGGGGCCGCCCCGC
GGCAAAGGGCCCTGATTCTCCCAAAAAATATGGGCCAAGGGATCCGCAAA
AAGGGGGATAGGGGGGCCCCCAAAAGGGGGGCGGGCGCGGGCAAACCAAA
AACCCCACCCCCATTTTTTTTTTAGGGGGGGGGGAAAAAATGTGGGGGGG
GATGTGGGGAGGAAGGAAAAAGAAGCCC
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