DY262462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.064e-30 Identity = 86/199 (43.22%), Postives = 108/199 (54.27%), Query Frame = 3 Query: 135 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 + GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG P + ++ I ++ + + VE R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 57 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 249
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.371e-30 Identity = 84/193 (43.52%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L G W +A GG YLG P V ++ I + + + VE R DP YPGG+FDPLG ++DP+ F E KVK IKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.096e-30 Identity = 81/193 (41.97%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 144 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 E P YL G PGD+G+D L PE R +E E+IHCRWAML G + PE L G W +A GG YLG P + ++ + + + + +E R + K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+ENL H+ADP NN Sbjct: 63 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHVADPVANN 253
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.096e-30 Identity = 83/193 (43.01%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 144 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 E P YL G PGD+G+D L PE R +E E+IH RWAML G + PE L G W +A GG YLG P V ++ I ++ + + FVE R + K YPGGAFDPLG + DP F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL H+ADP NN Sbjct: 61 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHVADPVANN 251
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.096e-30 Identity = 83/193 (43.01%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 144 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 E P YL G PGD+G+D L PE R +E E+IH RWAML G + PE L G W +A GG YLG P V ++ I ++ + + FVE R + K YPGGAFDPLG + DP F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL H+ADP NN Sbjct: 61 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHVADPVANN 251
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.096e-30 Identity = 82/193 (42.49%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE G W++A GG YLG P V ++ I + L + VE R + DP YPGG+FDPLG ++DP+ F E KVKE KNGRLA+ + GF + Q+ G GPLENLA HL DP +NN Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDP---LYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFI-QAIVTGKGPLENLADHLVDPVNNN 255
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.096e-30 Identity = 84/193 (43.52%), Postives = 102/193 (52.85%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L G W +A GG YLG P + ++ I + + + FVE R DP YPGGAFDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+ENL HLADP NN Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPI---YPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHLADPVANN 253
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.044e-30 Identity = 84/193 (43.52%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE G W +A GG YLG P V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30 Identity = 86/197 (43.65%), Postives = 106/197 (53.81%), Query Frame = 3 Query: 141 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG P V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 53 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPI---YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 243
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30 Identity = 82/193 (42.49%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L G W +A GG YLG P V ++ I + + + +E R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPL+NL HLADP +NN Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLDNLVDHLADPVNNN 255 The following BLAST results are available for this feature:
BLAST of DY262462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262462 ID=DY262462; Name=DY262462; organism=Citrus clementina; type=EST; length=880bpback to top |