DY262465

Overview
NameDY262465
Unique NameDY262465
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1278
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEXA_HUMAN (Beta-hexosaminidase subunit alpha OS=Homo sapiens GN=HEXA PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.349e-25
Identity = 89/267 (33.33%), Postives = 129/267 (48.31%), Query Frame = 1
Query:  298 IWPLPAQFTSGNDTLSVDPA----LYLXXXXXXXXXXXXXEAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNLW-KGAYSKWER-YTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQSWGT**PNL 1080
            +WP P  F + +    + P      Y              EAF+RY+ ++F     G  S        KR +   ++  + +V    N+   L   E+YTL +  ++ L +       + TV+GALRGLETFSQL    + +     +     I+D PRF  RGLL+DTSRHYLP+  I   ++ M+Y KLNV H H++D+ SFP E  T+P L  KG+Y+     YT       +  +    GI + A+ D PGH  SWG   P L
Sbjct:   23 LWPWPQNFQTSDQRYVLYPNNFQFQYDVSSAAQPGCSVLDEAFQRYRDLLF-----GSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLL-------SETVWGALRGLETFSQLV---WKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYA-RLRGIRVLAEFDTPGHTLSWGPGIPGL 273          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEXA_BOVIN (Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.301e-25
Identity = 82/227 (36.12%), Postives = 118/227 (51.98%), Query Frame = 1
Query:  406 EAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNLW-KGAYSKWER-YTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQSWGT**PNL 1080
            EAF+RY+ ++F     G  +    +   KR +   +   + +V    ++   LG  E+YTL +   + L +       + TV+GALRGLETFSQL    + +     Y     I+D PRF  RGLL+DTSRHYLP+  I   ++ M+Y K NV H H++D+ SFP E  T+P L  KG+Y+     YT       +  +    GI + A+ D PGH  SWG   P L
Sbjct:   63 EAFQRYRDLLF-----GSVAFRFPHPIEKRHTSEKNSLVVLVVTPGCDQFPSLGSVENYTLTINDEQSLLL-------SETVWGALRGLETFSQLI---WRSPEGTFYVNKTDIEDFPRFPHRGLLLDTSRHYLPLASILDTLDVMAYNKFNVFHWHLVDDSSFPYESFTFPELTKKGSYNPATHIYTAQDVKEVIEYA-RLRGIRVLAEFDTPGHTLSWGPGVPGL 273          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEXA_PONAB (Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.005e-25
Identity = 83/227 (36.56%), Postives = 119/227 (52.42%), Query Frame = 1
Query:  406 EAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNLW-KGAYSKWER-YTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQSWGT**PNL 1080
            EAF+RY+ ++F     G  S        KR +   ++  + +V    N+   L   E+YTL +  ++ L +       + TV+GALRGLETFSQL    + +     +     I+D PRF  RGLL+DTSRHYLP+  I   ++ M+Y KLNV H H++D+ SFP E  T+P L  KG+Y+     YT       +  +    GI + A+ D PGH  SWG   P L
Sbjct:   63 EAFQRYRDLLF-----GSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLL-------SETVWGALRGLETFSQLV---WKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYA-RLRGIRVLAEFDTPGHTLSWGPGIPGL 273          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEXB_PIG (Beta-hexosaminidase subunit beta OS=Sus scrofa GN=HEXB PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.948e-24
Identity = 90/262 (34.35%), Postives = 128/262 (48.85%), Query Frame = 1
Query:  298 IWPLPAQFTSGNDTLSVDPALYLXXXXXXXXXXXXXE----AFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDL-QLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFD-YDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNL-WKGAYSKWERYTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQSWG 1062
            +WPLP        +L + P  +              E    AF RY   IF        S+ +         +G ++  L++ V S+ +    +  +ESY L V   E L       + ANTV+GALRGLETFSQL   D Y T +V   +    I D PRF  RG+LIDT RH+L V  I + +++M++ K NVLH HI+D+QSFP + + +  L  KG+YS    YT       +  +    GI +  + D PGH +SWG
Sbjct:   32 LWPLPFAVDISPRSLHLSPNNFFFGHSPTSKAGSSCEILQEAFRRYYDFIFGFYKWHQGSYQL--------CFGTELQQLQVHVESECDTFPSISSNESYVLHVKGPEAL-------LRANTVWGALRGLETFSQLIYQDSYGTFTVNESE----IIDFPRFPHRGILIDTGRHFLSVKTIFKTLDAMAFNKFNVLHWHIVDDQSFPYQSINFGVLSSKGSYSLSHVYTPNDVRMVIEYA-RIRGIRVMPEFDTPGHSRSWG 273          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEXA_CAEBR (Beta-hexosaminidase A OS=Caenorhabditis briggsae GN=hex-1 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 4.798e-23
Identity = 67/166 (40.36%), Postives = 93/166 (56.02%), Query Frame = 1
Query:  565 GVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNL-WKGAYSKWERYTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQSW 1059
            G  E Y L V+       + EA I A TV+GALR +ET S L  +D  ++   +  A   I DKPRF  RG++ID+SRH+L ++VIK+ +E MS  KLNVLH H++D +SFP     +P L   GAYS    Y+      ++       GI +  + D+PGH  SW
Sbjct:  110 GASEEYLLRVS-------VSEAVINAQTVWGALRAMETLSHLVFYDQKSQEYQIRTAE--IFDKPRFPVRGIMIDSSRHFLSLNVIKRQLEIMSMNKLNVLHWHLVDSESFPYTSQKFPELHGVGAYSPRHVYSREDIS-EVIAFARLRGIRVIPEFDLPGHTSSW 265          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEXA_CAEEL (Beta-hexosaminidase A OS=Caenorhabditis elegans GN=hex-1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 8.183e-23
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 1
Query:  565 GVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNL-WKGAYSKWERYTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQSW 1059
            G  E Y L V+       + EA I A TV+GALR +E+ S L  +D+ ++   +      I DKPRF  RG++ID+SRH+L V+VIK+ +E MS  KLNVLH H++D +SFP   + +P L   GAYS    Y+       ++ +    GI +  + D+PGH  SW
Sbjct:  113 GASEEYLLRVS-------LTEAVINAQTVWGALRAMESLSHLVFYDHKSQEYQIRTVE--IFDKPRFPVRGIMIDSSRHFLSVNVIKRQLEIMSMNKLNVLHWHLVDSESFPYTSVKFPELHGVGAYSPRHVYSREDIADVIAFA-RLRGIRVIPEFDLPGHTSSW 268          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEXC_BOMMO (Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.438e-21
Identity = 62/166 (37.35%), Postives = 93/166 (56.02%), Query Frame = 1
Query:  553 DLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNLWK-GAYSKWERYTG*GCP*KLSVSPE*EGIMLWAKLDVPGH 1047
            +  L +DESY L ++      +   ATI  N+ +G   GLET SQL  +D D ++ L+      I+D+P + +RG+L+DT+R++  +D IK+ I++M+  KLN  H HI D QSFPL +   PNL K GAYS  + YT       +    E  G+ +  + D P H
Sbjct:  144 EFSLDMDESYELYISSTSSDKV--NATIRGNSFFGVRNGLETLSQLIVYD-DIRNNLLIVRDVTIKDRPVYPYRGILLDTARNFYSIDSIKRTIDAMAAVKLNTFHWHITDSQSFPLVLQKRPNLSKLGAYSPTKVYTKQDIREVVEYGLE-RGVRVLPEFDAPAH 305          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEX1_CANAL (Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 64/176 (36.36%), Postives = 99/176 (56.25%), Query Frame = 1
Query:  529 IVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNLWKGAYSKWERYTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQS 1056
            I V     DLQLGV+ESYTL +   +G++I       A T +GAL GL +  QL     + K V+       I D P F  RGL+ID+ R++L VD I + I+ M+ +K+N LH H+ D QS+P+ + +YP++ K AYS  E Y+       +  +    G+ +  ++D+PGH ++
Sbjct:   97 IQVDDATVDLQLGVNESYTLKI-NTDGINI------HAATTWGALHGLVSLQQLIIHTSEDKYVVPSSVT--ISDFPNFKHRGLMIDSGRNFLTVDSILEQIDIMALSKMNSLHWHLADSQSWPVALESYPHMIKDAYSNDEVYSKNDLKYIVDYARA-RGVRVIPEIDMPGHARA 262          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: HEXB_ENTHI (Beta-hexosaminidase subunit beta OS=Entamoeba histolytica GN=HEXB PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.558e-18
Identity = 65/185 (35.14%), Postives = 99/185 (53.51%), Query Frame = 1
Query:  556 LQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNL-WKGAYSKWERYTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQSWGT**P----NLWPFSI 1095
            L++G+DESY+L V K EG+ I       A TVYGA  GLET  Q+    Y  K ++ +  P  I+DKPR  +RGL+ID +R+        +II +M+  K NVLH H+ D Q+F  E   YP L  KGA+ + +  T       +    +  G++++ ++D P H  SW    P    ++W + +
Sbjct:  127 LKIGIDESYSLDVTK-EGIKI------SATTVYGARLGLETLIQMLR-PYQGKYIIKH-IPIMIEDKPRLQWRGLMIDVARNSFSRSAFVKIINAMAAIKANVLHIHLSDAQTFMFESKEYPELSKKGAFFQNKVLTQSFIKQLVQYGAK-RGVIVYPEIDTPAHTASWNAGYPGVVADIWDYIV 301          
BLAST of DY262465 vs. ExPASy Swiss-Prot
Match: FDL_DROME (Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.647e-18
Identity = 65/181 (35.91%), Postives = 97/181 (53.59%), Query Frame = 1
Query:  532 VVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHXHIIDEQSFPLEVLTYPNL-WKGAYSKWERYTG*GCP*KLSVSPE*EGIMLWAKLDVPGHCQS---WG 1062
            V+ S + +  L  DE+Y L   + EG  +  +  I AN+ +GA  GL T  QL  FD D   +L   A   ++D P+F +RGL++DTSRH+  V+ IK+ I  M  AK+N  H H+ D QSFP     YP L   GAYS+ E Y+      +++   +  G+ +  ++D P H  +   WG
Sbjct:  203 VLKSGDLNFSLDNDETYQLST-QTEGHRL--QVEIIANSYFGARHGLSTLQQLIWFD-DEDHLLHTYANSKVKDAPKFRYRGLMLDTSRHFFSVESIKRTIVGMGLAKMNRFHWHLTDAQSFPYISRYYPELAVHGAYSESETYSEQDVR-EVAEFAKIYGVQVIPEIDAPAHAGNGWDWG 378          
The following BLAST results are available for this feature:
BLAST of DY262465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
HEXA_HUMAN1.349e-2533.33Beta-hexosaminidase subunit alpha OS=Homo sapiens ... [more]
HEXA_BOVIN2.301e-2536.12Beta-hexosaminidase subunit alpha OS=Bos taurus GN... [more]
HEXA_PONAB3.005e-2536.56Beta-hexosaminidase subunit alpha OS=Pongo abelii ... [more]
HEXB_PIG1.948e-2434.35Beta-hexosaminidase subunit beta OS=Sus scrofa GN=... [more]
HEXA_CAEBR4.798e-2340.36Beta-hexosaminidase A OS=Caenorhabditis briggsae G... [more]
HEXA_CAEEL8.183e-2339.76Beta-hexosaminidase A OS=Caenorhabditis elegans GN... [more]
HEXC_BOMMO3.438e-2137.35Chitooligosaccharidolytic beta-N-acetylglucosamini... [more]
HEX1_CANAL6.484e-2036.36Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE... [more]
HEXB_ENTHI3.558e-1835.14Beta-hexosaminidase subunit beta OS=Entamoeba hist... [more]
FDL_DROME4.647e-1835.91Probable beta-hexosaminidase fdl OS=Drosophila mel... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AC02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262465 ID=DY262465; Name=DY262465; organism=Citrus clementina; type=EST; length=1278bp
ACCGCCATTACGGCTAAAAGAACAGCTTAAAAGAGTAAAAACTGTAACTA
CTTTTTGTCCTGTCTTTATGAGTTCATTCACCTGACTAACTGGTATCTCT
CCTCCACTTTCGCTTCGCTGCAGCTGTTCATCAGATCACTTTGGTTTTCC
AAAGGAATCTCCGTAAACCAAACCACAATGTTGCTCAAATCCCAAGAACA
TCTCTCAGTTCTCAAAGTTATAATCATCACCGCACTTCTCATCATTTTCA
CTTCCTCCCTTTCTGTCTCCACCGACGTGGACGATTCCCTCGCTTACATC
TGGCCTTTGCCAGCGCAATTCACTTCCGGTAACGACACGCTCTCCGTTGA
CCCAGCTCTTTATCTCTCCGTTTCGGGAAAAGGGTCGGGCTCGAAGATTG
TTAAAGAAGCGTTCGAGAGATACAAAGCTATTATTTTCGAGCACGAAGTC
GAAGGGGTTAATTCCCATTCTGTGTTTAATAATTTTAGAAAGAGGAGATC
GTGGGGTTTTGATATTGGAACATTGAAGATTGTTGTTCATTCGGATAATG
AAGACTTGCAGCTTGGTGTTGATGAGAGTTACACTTTGTTGGTGGCTAAG
AATGAGGGGCTGTCAATTATTGGAGAGGCAACAATAGAGGCAAATACAGT
TTATGGTGCTCTGCGAGGATTGGAGACATTCAGCCAATTGTGTTCTTTTG
ACTATGATACTAAATCCGTACTAGTATATAAAGCACCGTGGTACATCCAA
GACAAACCAAGATTTGCATTTCGTGGCCTTCTGATTGATACATCAAGGCA
CTATTTACCAGTAGATGTCATTAAGCAGATAATTGAATCTATGTCATATG
CAAAACTTAATGTCCTTCATTGNCATATCATAGACGAGCAGTCATTTCCT
CTTGAAGTGCTTACATATCCAAATTTGTGGAAGGGCGCATATTCAAAGTG
GGAGCGCTACACGGGTTGAGGATGCCCATGAAAATTGTCGGTTTCGCCAG
AATGAGAAGGCATCATGTTATGGGCGAAATTAGATGTTCCTGGTCATTGC
CAATCATGGGGAACTTGATAACCTAACCTTTGGCCTTTTTCCATCTTGTA
AAAGACCCCTTGGATGTTTCCAAAAATTTTTATTTTTAAAATGATTTTCC
GGCTTTCTTACCAAATTTTAAAAAAATTTTTTCCCCTTTTGAACCTGTTT
TTCCCTTGGGGGGGGGGGAAAAGGAGGGAAAAAACCGGGAGTGGGGCGGG
GAACCCCCTTCCTTCCCCCACGGTTGAG
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