DY262470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_SYNY3 (Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803) GN=ffh PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.348e-14 Identity = 57/204 (27.94%), Postives = 104/204 (50.98%), Query Frame = 2 Query: 386 MFQSIAGKANLDKADLEPALKALK--DRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTP-RRSIDILRD----------VHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQ 958 MF ++A + LE A K L+ D++ N+ E + E +AA + + + F I + Q A+ ++ + P ++ I I+ D V A+ ++ P K+T AK+A +L + K S +M A D +R A++QL+T +++ VP+F+ G + +P +A++ +++ G D VL+DTAGR+Q Sbjct: 1 MFDALADR-------LEDAWKKLRGQDKISESNIKEALQEVRRALLAADVNLQVVKGF--IKDVEQKALGADVISGVNPGQQFIKIVYDELVNLMGESNVPLAQAEQAPTVILMAGLQGTGKTTATAKLALYLRKQKRSALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKELGVDTVLIDTAGRLQ 195
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_SYNE7 (Signal sequence-binding protein OS=Synechococcus elongatus (strain PCC 7942) GN=ffh PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.427e-13 Identity = 46/187 (24.60%), Postives = 93/187 (49.73%), Query Frame = 2 Query: 398 IAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQ 958 + G+ + +++++ ALK ++ L+ +V + ++ V G ++ S R + + LV+++ V A+ + P K+T AK+A L + S ++ A D +R A++QL T +++ VP+FE G + +P +A++ +++ + G D V+VDTAGR+Q Sbjct: 16 LRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQVMGETH-------VPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQ 195
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_PONAB (Signal recognition particle 54 kDa protein OS=Pongo abelii GN=SRP54 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.748e-12 Identity = 46/192 (23.96%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 380 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952 +S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS ++Q A+ + LV+++ P V A + K K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++ ++++VDT+GR Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGR 194
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_MOUSE (Signal recognition particle 54 kDa protein OS=Mus musculus GN=Srp54 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 3.748e-12 Identity = 46/192 (23.96%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 380 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952 +S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS ++Q A+ + LV+++ P V A + K K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++ ++++VDT+GR Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGR 194
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_MACFA (Signal recognition particle 54 kDa protein OS=Macaca fascicularis GN=SRP54 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.748e-12 Identity = 46/192 (23.96%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 380 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952 +S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS ++Q A+ + LV+++ P V A + K K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++ ++++VDT+GR Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGR 194
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_HUMAN (Signal recognition particle 54 kDa protein OS=Homo sapiens GN=SRP54 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.748e-12 Identity = 46/192 (23.96%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 380 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952 +S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS ++Q A+ + LV+++ P V A + K K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++ ++++VDT+GR Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGR 194
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_CANFA (Signal recognition particle 54 kDa protein OS=Canis familiaris GN=SRP54 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.748e-12 Identity = 46/192 (23.96%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 380 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952 +S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS ++Q A+ + LV+++ P V A + K K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++ ++++VDT+GR Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGR 194
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_BOVIN (Signal recognition particle 54 kDa protein OS=Bos taurus GN=SRP54 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.748e-12 Identity = 46/192 (23.96%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 380 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952 +S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS ++Q A+ + LV+++ P V A + K K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++ ++++VDT+GR Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGR 194
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: FTSY_ECOLI (Cell division protein ftsY OS=Escherichia coli (strain K12) GN=ftsY PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.748e-12 Identity = 48/170 (28.24%), Postives = 80/170 (47.06%), Query Frame = 2 Query: 452 LKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGRMQD 961 L+++L+ +V E K+ ++ K+L + +++ M E L ++ P E + P+ K+T + K+A Q SVM+AA DTFR+ AVEQL+ +R +P+ + D A V +AIQ DV++ DTAGR+Q+ Sbjct: 231 LEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNV-----------EGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQN 389
BLAST of DY262470 vs. ExPASy Swiss-Prot
Match: SRP54_RAT (Signal recognition particle 54 kDa protein OS=Rattus norvegicus GN=Srp54 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.895e-12 Identity = 46/192 (23.96%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 380 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEGTRHGSDVVLVDTAGR 952 +S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS ++Q A+ + LV+++ P V A + K K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++ ++++VDT+GR Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGR 194 The following BLAST results are available for this feature:
BLAST of DY262470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262470 ID=DY262470; Name=DY262470; organism=Citrus clementina; type=EST; length=1266bpback to top |