DY262472

Overview
NameDY262472
Unique NameDY262472
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1329
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.867e-18
Identity = 63/194 (32.47%), Postives = 95/194 (48.97%), Query Frame = 3
Query:  105 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAV 686
            RA+ +  FGGPEVL+V+ +V VP  K ++VL++  A  INP++T +RSG    I  PLLP   G D++G V ++G  V +   G  VF     + + G YA+YA+ S+  +   P  +     +AI     TA RAL  +AR   G+                Q + A G  V  T G++   +V+       V
Sbjct:    9 RAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRI--PLLPYTPGTDVAGVVESIGNDVSAFKKGDRVFTT---STISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKVVLQNGAHEV 197          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_PONAB (Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.744e-18
Identity = 69/245 (28.16%), Postives = 119/245 (48.57%), Query Frame = 3
Query:  105 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDR-VLAAGAVQA-----VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 818
            RAV +  FGGPEVL+++ ++ VP  K ++ L++  A  +NP++T +RSG Y R   +PLLP   G D++G + AVG +  +   G  VF +   + + G YA+YA+ ++  +   P  +     +AI     TA+RAL  +A +  G+                Q + A G  V  T G++   + VL  GA +      V+Y  K  +   +   D +++ +      +  L+ L  GG  + +
Sbjct:    9 RAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSR---KPLLPYTPGSDVAGVIEAVGGNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDVIIEMLANVNLNK-DLSLLSHGGQVIVV 246          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.423e-17
Identity = 67/214 (31.31%), Postives = 105/214 (49.07%), Query Frame = 3
Query:  129 GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM-----SEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKDIELAIKG----KFDAVL 743
            GG   LE    V VP  K NEV ++  A S+NP+D +++ G  R       P I   D++GEV  VG+ V++   G +V   L      G  A++AV +E     +P  V  A+A+A+P A LTA +AL   A +      +                  Q +  +  HV+ATCG+++I+ V + GA + +DY + +   A+K     K+DAV+
Sbjct:   16 GGAAGLE-HVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLG-GGGLAEFAVATEKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLANAHVTATCGARNIEFVKSLGADEVLDYKTPE-GAALKSPSGKKYDAVV 226          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_PIG (Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.858e-17
Identity = 71/238 (29.83%), Postives = 112/238 (47.06%), Query Frame = 3
Query:  108 AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDR-VLAAGAVQA-----VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 803
            A+ + +FGGPEV++++ +V +P  K N+VL++  A  +NP+DT +RSG      +PLLP   G D++G V AVG  V S   G  VF     + + G YA+YA+ ++D +   P  +     +AI     TA  AL  +A +  G+                Q + A G  V  T G++     VL  GA +      V+Y  K  +   +   D +++ +         LN L  GG
Sbjct:   10 AIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHACGVNPVDTYIRSGTHN--MKPLLPYTPGLDVAGIVEAVGEHVSSFKKGDRVFTV---STLSGGYAEYALAADDTVYMLPEKLDFKQGAAIGIPYFTACLALLHSACVKAGEIVLIHGASGGVGIAACQIARAYGLKVLGTAGTEEGQNIVLQNGAHEVFNHREVNYIDKIKKSVGEKGIDVIIEMLANVNLSN-DLNLLSHGG 241          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_LAMGU (Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.427e-17
Identity = 71/241 (29.46%), Postives = 113/241 (46.89%), Query Frame = 3
Query:  105 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKDIEL-------AIKGKFDAVLDTIGAPETERLGLNFLKRGG 803
            RA+ +  FGGPEVL+++ +V VP  + ++VL++ +A  +NP+DT +RSG Y R   +P LP   G D++G + AVG  V +   G  VF     + V G YA+YA+ ++  +   P  +     +AI     TA+RAL  +A    G+                Q + A    V  T G++   RV+       V    +DI +         KG  D +++ +         LN L +GG
Sbjct:    9 RAIRVSEFGGPEVLKLQSDVAVPIPEEHQVLIKVQACGVNPVDTYIRSGTYSR---KPRLPYTPGLDVAGLIEAVGERVSAFKKGDRVFTT---STVSGGYAEYALAADHTVYKLPGELDFQKGAAIGVPYFTAYRALLHSACAKAGESVLVHGASGGVGLAACQIARACCFKVLGTAGTEEGQRVVLQNGAHEVFNHREDINIDKIKKSVGEKG-IDVIIEMLANVNLSN-DLNLLSQGG 241          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 9.222e-17
Identity = 62/198 (31.31%), Postives = 102/198 (51.52%), Query Frame = 3
Query:  105 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDR-VLAAGAVQAVDY 692
            RA+ +  FGGPEVL+++ +V VP  + ++VL++  A  +NP++T +RSG Y R   +P LP   G D++G + +VG  V +   G  VF     + V G YA++A+ +++   P P ++     +A+     TA RAL  +AR   G+                Q + A G  V  T GS+   + VL  GA +  ++
Sbjct:    9 RAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSR---KPALPYTPGSDVAGIIESVGDGVSAFKKGDRVFCF---STVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNH 200          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: YBI2_SCHPO (Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe GN=SPBC16A3.02c PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.807e-16
Identity = 68/247 (27.53%), Postives = 113/247 (45.75%), Query Frame = 3
Query:  123 RFGGP-EVLEVRPNVEVP---DLKPNEVLVRTRAVSINPLDTRMRSGY---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGA-LHPTAVR--GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAVDYSSKDI--ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 827
            R G P +VL +   + +P   +L P +VLV   A SINPLD ++ + Y    +++F+  LP I G D +G V AVG+ V+  +  Q V+G    P A R  G+ A + V  + ++   P  V+  + +    A LTAW  L    ++  G +                 + A  C V+    ++++D   + GA   +DY   ++   LA  G +D V D +      R    F+K  G +  + G+
Sbjct:   19 RTGKPKDVLYLEKGLHIPNPAELGPYDVLVEVVATSINPLDYKLMNTYQMIAKALFK--LPNIPGYDFAGRVLAVGSEVKEFSATQRVWGCQSFPRAGRQGGSCATHIVTGDKDVWHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKVKPGTKLVIEGASGGVGTFAVALAKALECEVTTISSTENLDLCKSLGATHTLDYKKDNLVERLADLGPYDFVFDCVNDNVLYRASSKFVKPDGAFFGIGGD 263          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_PSEAE (Quinone oxidoreductase OS=Pseudomonas aeruginosa GN=qor PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.874e-15
Identity = 68/216 (31.48%), Postives = 101/216 (46.76%), Query Frame = 3
Query:  126 FGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-GAVQAVDYSSKDI-----ELAIKGKFDAVLDTIG 755
            +GGPEVLE R + +  +  P EV VR RA+ +N +DT  RSG   +   P LP  LG + +GEV AVG+ V    VG  V  A  P    G Y++  VL+E++L   P  +    A+A+    LT    L+    +  G+                Q++ A G  +  T  S    R+    GA + +DYS +++     EL    K   V D++G
Sbjct:   10 YGGPEVLEYR-DYQPAEPGPREVRVRNRAIGLNFIDTYYRSGLYPA---PGLPSGLGSEGAGEVEAVGSEVTRFKVGDRVAYATGPL---GAYSELHVLAEEKLVHLPDGIDFEQAAAVMLKGLTTQYLLRQTYELRGGETILFHAAAGGVGLFACQWAKALGVQLIGTVSSPEKARLARQHGAWETIDYSHENVARRVLELTDGKKCPVVYDSVG 218          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: CIPB_EMENI (Zinc-binding alcohol dehydrogenase domain-containing protein cipB OS=Emericella nidulans GN=cipB PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.351e-12
Identity = 62/212 (29.25%), Postives = 92/212 (43.40%), Query Frame = 3
Query:  165 EVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAVQAVDYSS----KDIELAIKGKFDA-VLDTIGAPET 767
            E P   P  NE+LV+  AV+INP+D  ++S   ++ +    P ILG+D++GEV  VG +V     G  V G     A +      +  Y +L  +  +  P  +++ DA+ +P    TA   L                          Q  VA+G  V  T   K+ D V   GA Q  DY S    +D+  A++GK  A  +D IG   T
Sbjct:   24 EAPSYTPEENEILVKNHAVAINPVDGSLQS---KAWWPMNYPTILGQDVAGEVVQVGPNVARFQPGDRVVGHAVGMATKRLQDNAFQAYTILQTNMASQLPSEISYEDAAVLPLGLSTAASGL----------------FQDDVGSNAIQLGVAAGYEVFTTASPKNFDYVKELGASQVFDYHSATVAQDLVAALQGKTVAGAMDCIGFAAT 216          
BLAST of DY262472 vs. ExPASy Swiss-Prot
Match: QOR_ECOLI (Quinone oxidoreductase OS=Escherichia coli (strain K12) GN=qor PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.070e-12
Identity = 68/257 (26.46%), Postives = 116/257 (45.14%), Query Frame = 3
Query:  123 RFGGPEVLEVRPNVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCG-SKSIDRVLAAGAVQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGL 869
            + GGPEVL+    VE     P  NE+ V  +A+ IN +DT +RSG       P LP  LG + +G V+ VG+ V+ +  G  V   ++  +  G Y+    +  D+    P +++   A+A     LT +  L+    +   ++               Q++ A G  +  T G ++     L AGA Q ++Y  +D+     E+    K   V D++G    ER  L+ L+R G  ++    + A+    G+ LG+
Sbjct:    9 KHGGPEVLQA---VEFTPADPAENEIQVENKAIGINFIDTYIRSGL---YPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRV---VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWER-SLDCLQRRGLMVSFGNSSGAVT---GVNLGI 252          
The following BLAST results are available for this feature:
BLAST of DY262472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
QOR_CAVPO2.867e-1832.47Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ ... [more]
QOR_PONAB3.744e-1828.16Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=... [more]
QORH_ARATH1.423e-1731.31Putative quinone-oxidoreductase homolog, chloropla... [more]
QOR_PIG1.858e-1729.83Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 ... [more]
QOR_LAMGU2.427e-1729.46Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE... [more]
QOR_RAT9.222e-1731.31Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
YBI2_SCHPO7.807e-1627.53Zinc-type alcohol dehydrogenase-like protein C16A3... [more]
QOR_PSEAE3.874e-1531.48Quinone oxidoreductase OS=Pseudomonas aeruginosa G... [more]
CIPB_EMENI2.351e-1229.25Zinc-binding alcohol dehydrogenase domain-containi... [more]
QOR_ECOLI3.070e-1226.46Quinone oxidoreductase OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AC09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262472 ID=DY262472; Name=DY262472; organism=Citrus clementina; type=EST; length=1329bp
CCAAAACCAGAACCAAAATGCAAATCCTAAAAGCCCGCAAGAGTGCTAAC
GACTATTTGGTTAGTCCGTTACGGTTCGTGCGATTCCTGGTTACCACTAG
CTGCAGGGCAGTGGTGCTGCCGCGGTTTGGGGGGCCGGAGGTCCTGGAGG
TGCGGCCAAATGTGGAGGTTCCGGATCTCAAGCCCAATGAGGTCCTCGTT
CGTACCCGAGCTGTCTCTATCAATCCACTCGATACAAGAATGCGATCAGG
CTATGGTCGTTCGATATTTGAACCACTTCTACCTCTCATTTTGGGTCGCG
ATATTAGTGGTGAAGTTGCAGCTGTTGGAGCTTCAGTGAGGTCGCTGACT
GTCGGGCAAGAAGTGTTTGGTGCATTGCATCCAACTGCTGTGAGAGGCAC
TTATGCTGACTATGCTGTTCTGTCAGAAGATGAACTCACTCCAAAGCCAG
TATCGGTTACTCATGCGGATGCAAGTGCAATTCCTTTTGCTGCACTGACT
GCATGGCGTGCTCTAAAATGTGCTGCTAGGATGTCTGAGGGGCAAAGGTT
ATTAGTTCTGGGTGGTGGAGGAGCAGTAGGTTTTGCTGCAGTACAGTTTT
CAGTAGCTTCAGGGTGTCATGTTAGTGCTACTTGTGGAAGCAAAAGTATA
GATCGAGTACTGGCAGCTGGTGCTGTGCAAGCTGTTGACTATTCTTCTAA
GGACATTGAATTGGCAATAAAGGGGAAGTTTGATGCAGTTTTGGACACTA
TTGGTGCTCCAGAAACTGAAAGATTGGGCCTCAATTTTTTGAAGAGGGGT
GGACATTATATGACACTTCACGGCGAGACAGCAGCATTGGCTGATCATTA
TGGACTAGCACTCGGGCTGCCTATAGCTACAACTGTTCTACTGAAGAAAC
GGATGCAAACTTGGTATTCTTATGGAATAGACTATTCATACATATACATG
CGGGCTGATGCAGAANGGGTAGAGAAGATTCGCAAGCTATCTGAAACTGG
AAAACTCAAAATACCTGTTGAATAAAACATTCACATGACGCAAGTAAAAA
AAACTCATGAAGGCAAAAAAAAGAGGCTCATTCCCTGGTAAAAGTAGTTC
CGGGAATTTGATTGAAGATTGAAACTATTTAACCCAAAAATGCCTTCCAC
ATTTCTTTGCCAAGGGTTTGGAAGGGGCACCACCGGCCTCCTTTTGGGCC
CCTTTTACCCCCCTTAACCATTTTCACGGGTGTGTTTTCTTAAAAAAAAA
AGGGGTTTTTTTCCCTTGTGTTACAACAAAAACTAAAATATCCAACCTCC
CACAAAAAACCTCAGAAAAAAAAATTTTT
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