DY262489

Overview
NameDY262489
Unique NameDY262489
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1338
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1)

HSP 1 Score: 583.948 bits (1504), Expect = 7.057e-166
Identity = 298/380 (78.42%), Postives = 320/380 (84.21%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYRRRRGTKRCERSSGSNQD*EENPIRGTG-AQLGFRWGNKYPPPIGWFLWGGFWLRVQK-VC 1172
            MRE ISIHIGQAGIQVGNACWELYCLEHGIQPDGQM SDKT+GGGDDAFNTFFSETGAGKHVPR +FLDLEPTV+DEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF+AV                 VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDV+V+LDNEAIYDICRRSLDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKAYHEQLSV+EITN+AFEP+SMM KCDPRHGKYMACCLMYR     K    S  + +   +  I+       GF+ G  Y PP    + GG   +VQ+ VC
Sbjct:    1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNASVATIK--TKRTIQFVDWCPTGFKCGINYQPPT--VVPGGDLAKVQRAVC 376          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_TETTH (Tubulin alpha chain OS=Tetrahymena thermophila PE=1 SV=1)

HSP 1 Score: 579.711 bits (1493), Expect = 1.320e-165
Identity = 279/320 (87.19%), Postives = 298/320 (93.12%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIH+GQ GIQVGNACWEL+CLEHGIQPDGQM SDKT+GGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF++V                 VDYGKKSKLGFT+YPSPQVST+VVEPYNS+LSTHSLLEHTDV+V+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKAYHEQLSV+EITNSAFEP++MMAKCDPRHGKYMAC +MYR
Sbjct:    1 MREVISIHVGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.320e-165
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNASIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_EUPOC (Tubulin alpha chain OS=Euplotes octocarinatus PE=3 SV=1)

HSP 1 Score: 577.785 bits (1488), Expect = 6.526e-165
Identity = 279/320 (87.19%), Postives = 296/320 (92.50%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIHIGQ GIQVGNACW+L+CLEHGIQPDGQM SDKT+GGGDDAFNTFFSETGAGKHVPRAVFLDLEPTV DEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF+ FH+V                 VDYGKKSKL FT+YPSPQVST+VVEPYNSVLSTHSLLEHTDV+V+LDNEA+YDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV+EITNS+FEP+SMMAKCDPRHGKYMACC+MYR
Sbjct:    1 MREVISIHIGQGGIQVGNACWDLFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVCDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFIGFHSVGGGTGSGLGSLLLERLSVDYGKKSKLTFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSSFEPASMMAKCDPRHGKYMACCMMYR 320          

HSP 2 Score: 26.1794 bits (56), Expect = 6.526e-165
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTIQFVDWSPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_TETPY (Tubulin alpha chain OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 579.711 bits (1493), Expect = 8.518e-165
Identity = 279/320 (87.19%), Postives = 298/320 (93.12%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIH+GQ GIQVGNACWEL+CLEHGIQPDGQM SDKT+GGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF++V                 VDYGKKSKLGFT+YPSPQVST+VVEPYNS+LSTHSLLEHTDV+V+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKAYHEQLSV+EITNSAFEP++MMAKCDPRHGKYMAC +MYR
Sbjct:    1 MREVISIHVGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYR 320          

HSP 2 Score: 23.8682 bits (50), Expect = 8.518e-165
Identity = 16/39 (41.03%), Postives = 16/39 (41.03%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHP 1119
            DVVPKDVN            QFV   P  G   G N  P
Sbjct:  322 DVVPKDVNASIATIKTKRTIQFVDWCPT-GFKVGINYQP 359          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1_ORYSJ (Tubulin alpha-1 chain OS=Oryza sativa subsp. japonica GN=TUBA1 PE=1 SV=1)

HSP 1 Score: 573.548 bits (1477), Expect = 9.361e-164
Identity = 279/320 (87.19%), Postives = 293/320 (91.56%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG M SD TVG   DAFNTFFSETGAGKHVPRA+F+DLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVF+AV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 9.361e-164
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTVQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1)

HSP 1 Score: 573.163 bits (1476), Expect = 1.595e-163
Identity = 279/320 (87.19%), Postives = 295/320 (92.19%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIHIGQAG+QVGNACWELYCLEHGIQPDG M SDKT+G  DDAFNTFFSETGAGKHVPRAVFLDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF +V                 VDYGKKSKLGFTVYPSPQV+T+VVEPYNSVLSTH+LLEHTDV+V+LDNEAIYDICRRSLDI+RPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML SYAPVISAEKAYHEQLSV+EITNSAFEP+SMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREVISIHIGQAGVQVGNACWELYCLEHGIQPDGLMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSSVGGGTGSGLGALLLERLSVDYGKKSKLGFTVYPSPQVATAVVEPYNSVLSTHALLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLCSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.1794 bits (56), Expect = 1.595e-163
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTIQFVDWSPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_TOXGO (Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1)

HSP 1 Score: 571.237 bits (1471), Expect = 4.627e-163
Identity = 277/320 (86.56%), Postives = 294/320 (91.88%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIH+GQAGIQ+GNACWEL+CLEHGIQPDGQM SDKT+GGGDDAFNTFFSETGAGKHVPR VFLDLEPTV+DEVRTG YR LFHPEQLISGKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFL+F+AV                 VDYGKKSKL F  +PSPQVST+VVEPYNSVLSTHSLLEHTDV+V+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP+ISAEKAYHEQLSV+EITNSAFEP+SMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 4.627e-163
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTIQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_NEOCA (Tubulin alpha chain OS=Neospora caninum GN=TUBA PE=2 SV=1)

HSP 1 Score: 571.237 bits (1471), Expect = 4.627e-163
Identity = 277/320 (86.56%), Postives = 294/320 (91.88%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIH+GQAGIQ+GNACWEL+CLEHGIQPDGQM SDKT+GGGDDAFNTFFSETGAGKHVPR VFLDLEPTV+DEVRTG YR LFHPEQLISGKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFL+F+AV                 VDYGKKSKL F  +PSPQVST+VVEPYNSVLSTHSLLEHTDV+V+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP+ISAEKAYHEQLSV+EITNSAFEP+SMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 4.627e-163
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTIQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 570.852 bits (1470), Expect = 6.039e-163
Identity = 277/320 (86.56%), Postives = 293/320 (91.56%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG M SD +VG   DAFNTFFSETG+GKHVPRA+F+DLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVF+AV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 6.039e-163
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTVQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 570.852 bits (1470), Expect = 6.039e-163
Identity = 277/320 (86.56%), Postives = 293/320 (91.56%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG M SD +VG   DAFNTFFSETG+GKHVPRA+F+DLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVF+AV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 6.039e-163
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTVQFVDWCPT-GFKCGINYQPP 360          
The following BLAST results are available for this feature:
BLAST of DY262489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 426
Match NameE-valueIdentityDescription
TBA1_CHLRE7.057e-16678.42Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii... [more]
TBA_TETTH1.320e-16587.19Tubulin alpha chain OS=Tetrahymena thermophila PE=... [more]
TBA_EUPOC6.526e-16587.19Tubulin alpha chain OS=Euplotes octocarinatus PE=3... [more]
TBA_TETPY8.518e-16587.19Tubulin alpha chain OS=Tetrahymena pyriformis PE=3... [more]
TBA1_ORYSJ9.361e-16487.19Tubulin alpha-1 chain OS=Oryza sativa subsp. japon... [more]
TBA1_NAEGR1.595e-16387.19Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=... [more]
TBA_TOXGO4.627e-16386.56Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1[more]
TBA_NEOCA4.627e-16386.56Tubulin alpha chain OS=Neospora caninum GN=TUBA PE... [more]
TBA6_MAIZE6.039e-16386.56Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV... [more]
TBA3_ELEIN6.039e-16386.56Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AE03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262489 ID=DY262489; Name=DY262489; organism=Citrus clementina; type=EST; length=1338bp
CAATTCCCGACTCAAATCTCTAACAAAATCACACAAGAATGAGAGAATGC
ATCTCAATTCACATCGGCCAGGCCGGTATCCAGGTTGGTAATGCCTGCTG
GGAGCTCTATTGCCTCGAACATGGCATTCAGCCTGATGGGCAAATGTTAA
GTGACAAAACAGTCGGAGGCGGAGATGATGCTTTCAACACATTCTTCAGT
GAGACCGGCGCCGGAAAGCACGTGCCACGCGCCGTGTTTTTGGACCTTGA
ACCAACTGTAATCGATGAAGTGAGGACTGGCGCCTACCGTCAGTTATTTC
ACCCGGAGCAACTCATTAGCGGCAAAGAAGATGCTGCTAACAACTTTGCC
AGAGGTCACTACACAATTGGGAAAGAGATTGTGGATTTGTGCCTTGATAG
GATCAGGAAGTTAGCTGATAACTGTACCGGTCTACAAGGGTTCCTCGTGT
TCCACGCGGTTGGTGGAGGAACAGGATCCGGGCTCGGGTCTTTGCTCCTT
GAGAGGCTGTCTGTTGATTACGGCAAGAAATCGAAACTGGGATTTACCGT
TTACCCTTCACCTCAAGTTTCAACCTCAGTTGTTGAGCCTTACAACAGCG
TTTTGTCCACTCACTCTCTGTTAGAACACACTGACGTTTCTGTGTTGCTT
GACAATGAAGCAATCTACGATATTTGTCGCCGCTCACTCGATATCGAGAG
ACCCACTTATACCAATCTCAACAGACTTGTTTCTCAGGTGATTTCTTCAC
TAACGGCGTCTCTTCGTTTTGATGGAGCCTTAAACGTGGATGTGACAGAG
TTCCAAACAAATTTAGTCCCATACCCTCGGATTCACTTCATGCTTTCATC
ATATGCCCCTGTTATCTCAGCAGAGAAGGCCTACCACGAGCAACTATCAG
TGTCAGAAATCACAAACAGCGCATTTGAGCCCTCGTCAATGATGGCAAAA
TGTGACCCCCGCCATGGGAAATACATGGCATGTTGTTTGATGTACAGAAG
AAGACGTGGTACCAAAAGATGTGAACGCAGCAGTGGCAGCAATCAAGACT
AAGAAGAAAATCCAATTCGTGGGACGGGTGCCCAACTGGGGTTCAGGTGG
GGGAACAAATACCCACCCCCCATCGGGTGGTTCCTGTGGGGGGGATTTTG
GCTAAGGGTTCAAAAAGTCTGTGGGTTTAAAATTCAAAAACTAAAAAAAG
TTGGGGTGGAAGGGGTTTTCTCAAAAAATTTAATTAAAAAATTTTGAATT
TTGATTTTTTTCCCCAAAAAAAGGGGGGTTTGTTTGGTTCTTTTTTGTAT
TTGGGTGGGGGGAAAGGGGGGCGGGTGGGGGGAGAGAA
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