DY262489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_OCTVU (Tubulin alpha chain (Fragment) OS=Octopus vulgaris PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.250e-50 Identity = 86/109 (78.90%), Postives = 104/109 (95.41%), Query Frame = 3 Query: 672 ICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998 IC+R+LDIERP+YTNLNRL+SQV+SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAP+ISAEKAYHEQL+V+E+T++ FEP++ M KCDPRHGKYMACC++YR Sbjct: 1 ICKRNLDIERPSYTNLNRLISQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLAVAEVTSACFEPANQMVKCDPRHGKYMACCMLYR 109 HSP 2 Score: 26.5646 bits (57), Expect = 5.250e-50 Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1 Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122 DVVPKDVN QFV P G G N PP Sbjct: 111 DVVPKDVNAAIATIKTKRSIQFVDWCPT-GFKVGINYQPP 149
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBAA_PNECA (Tubulin alpha chain (Fragment) OS=Pneumocystis carinii GN=TUB-A PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 3.963e-47 Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 3 Query: 648 LDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998 +DNEAIYDICRR+L IERP YTNLNRL++ V+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L +YAPVISA KA HE SVSEITN+ FEP++ M KCDPR+GKYMA CL+YR Sbjct: 1 VDNEAIYDICRRNLGIERPGYTNLNRLIAHVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVTYAPVISAAKAVHEANSVSEITNACFEPNNQMVKCDPRNGKYMATCLLYR 117 HSP 2 Score: 21.9422 bits (45), Expect = 3.963e-47 Identity = 15/49 (30.61%), Postives = 24/49 (48.98%), Query Frame = 2 Query: 1046 RLRRKSNSWDGCPTGVQVGEQIPTPHRVVPVGGILAKGSKSLWV*NSKT 1192 R +R D CPTG ++G P V G LAK +++ + ++ T Sbjct: 133 RTKRTIQFVDWCPTGFKLGVCYQPPQHV--PHGDLAKVDRAVCMLSNTT 179
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.378e-44 Identity = 105/310 (33.87%), Postives = 170/310 (54.84%), Query Frame = 3 Query: 42 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVV-EPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHE------QLSVSEITNSAFEPSSMM 944 RE I++ +GQ G QVG+ W C EHGI DG++ T+GG D + FF + +++PRA+ LDLEP VI+ ++T R LF+PE + KE A NN+A G YT G+ + + LD I + A+ C L+GF + H++ Y KK ++V+P+ S+ VV +PYNS+L+ L H D V+LDN A+ I L + +P +N L++ V+++ T +LR+ G +N D+ +L+P PR HF+++ Y P ++AE A + + +V ++ +P ++M Sbjct: 3 REIINLQVGQCGNQVGSEFWRKLCQEHGIAKDGRLEDFATLGG--DRKDVFFYQADDEQYIPRAILLDLEPRVINGIQTSDLRNLFNPENIFISKEGGGAGNNWASG-YTQGEAVQETLLDMIDREAEYCDSLEGFNMCHSIAGGTGSGMGSYMLELISDRYSKKLIQTYSVFPNQSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERLHLHKPDVQQINSLIATVMAASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTP-LTAENAAGQVTSNIRKTTVLDVMRRLLQPKNIM 308
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 2.351e-44 Identity = 102/312 (32.69%), Postives = 166/312 (53.21%), Query Frame = 3 Query: 42 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV----ISAEKAYHEQLSVSEITNSAFEPSSMMAKCDP 959 RE I+I GQ G VG+ W+ CLEHGI DG + T GG D + FF ++ +++PRA+ LDLEP V++ +++G Y+ +++PE G++ A NN+ G Y G+ + + D I + AD L+GF+ H++ + KK ++V+P Q + VV PYNS+L+ L ++ D V+LDN A+ I L ++ P++ NRLVS V+S+ T +LR+ G ++ D+ +L+P PR HF+L+SY P I K + +V ++ +P + M +P Sbjct: 3 REIITIQAGQCGNNVGSQFWQQLCLEHGISQDGNLEEFATEGG--DRKDVFFYQSDDTRYIPRAILLDLEPRVLNGIQSGPYKNIYNPENFFIGQQGIGAGNNWGAG-YAAGEVVQEEVFDMIDREADGSDSLEGFMFLHSIAGGTGSGLGSFLLERMNDRFPKKLIQTYSVFPDTQAADVVVNPYNSLLAMRRLTQNADSVVVLDNAALSRIVADRLHVQEPSFQQTNRLVSTVMSASTTTLRYPGYMHNDLVGIIASLIPTPRSHFLLTSYTPFTGDNIDQAKTV-RKTTVLDVMRRLLQPKNRMVSINP 310
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 6.839e-44 Identity = 104/316 (32.91%), Postives = 171/316 (54.11%), Query Frame = 3 Query: 42 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV-ISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMA 980 RE I++ +GQ G Q+G+ W+ C EHGI G + ++ G D + FF ++ +VPRA+ LDLEP VID ++T Y L++ E + ++ A NN+A G Y G+ D D I + AD L+GFL+ H++ + KK ++V+P S+ VV+ YNSVL+ L+E+ D +V+LDN A++ I +L I++PT N LVS V+S+ T +LR+ G +N D+ +L+P P+ HF+++ Y P+ I + + SV ++ +P ++M + GKY++ Sbjct: 3 REIITLQVGQCGNQIGSEFWKQLCKEHGINAAGYL--EEFAKPGIDRKDVFFYQSDDDHYVPRALLLDLEPRVIDSIKTSEYSGLYNQENIFVAEKGTGAGNNWANG-YKQGESFYDDIFDMIDREADGSESLEGFLLTHSISGGTGSGMGSYILERLNDRFPKKIIQTYSVFPDD--SSVVVQQYNSVLTLKRLIENADSTVVLDNNALHRIVGENLRIDQPTMDQTNSLVSTVMSASTTTLRYPGYMNNDLVGMLASLIPTPKCHFLITGYTPLSIDRQTESVRKTSVLDVMRRLLQPQNIMVSAPTKTGKYIS 313
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 2.599e-43 Identity = 105/312 (33.65%), Postives = 167/312 (53.53%), Query Frame = 3 Query: 42 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ-VSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS---AEKAYHEQLSVSEITNSAFEPSSMMAKCDP 959 RE I++ GQ G Q+G+ W+ CLEHGI PDG + S T G D + FF ++ +++PRA+ +DLEP V++ + + Y L++PE ++ K A NN+A G Y+ + I + +D I + AD L+GF + H++ Y KK ++V+P+ Q VS VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N+LVS V+S+ T +LR+ G +N D+ +L+P PR HF+L+SY P + E + +V ++ P + M +P Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGV--DRKDVFFYQSDDTRYIPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNP 311
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 5.790e-43 Identity = 100/311 (32.15%), Postives = 167/311 (53.70%), Query Frame = 3 Query: 42 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS--AEKAYH-EQLSVSEITNSAFEPSSMMAKCDP 959 RE +++ +GQ G Q+G W+ C EHGI +G + T GG D + FF + ++PRA+ +DLEP VI+ + Y L++PE + K+ A NN+A+G Y+ G+ I + ++ I + A+ L+GF+V H++ + KK ++V+P+ Q VV+PYNS+L+ L+ H D V+LDN A+ I L ++ P++ N+LVS VI++ T +LR+ G +N D+ +L+P PR HF+++SY P S +KA + +V ++ +P + M P Sbjct: 3 REIVTVQLGQCGNQMGAVYWQRLCAEHGISSEGILEEWATEGG--DRKDVFFYQADDEHYIPRAILVDLEPRVINNILASPYANLYNPENIFVSKDGGGAGNNWAQG-YSAGERIYEDIMEMIDREAEGSDSLEGFMVMHSIAGGTGSGLGSFLLERLNDKFPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPGYMNNDLVGIIASLIPTPRCHFLMTSYTPFTSDQIDKAKTIRRTTVLDVMRRLLQPKNRMVLTTP 310
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBG_NEUCR (Tubulin gamma chain OS=Neurospora crassa GN=tub-4 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 9.876e-43 Identity = 99/312 (31.73%), Postives = 168/312 (53.85%), Query Frame = 3 Query: 42 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP-SPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVI--SAEKAYH-EQLSVSEITNSAFEPSSMMAKCDP 959 RE I+I GQ G +G+ W+ CLEHGI DG + T GG D + FF ++ +++PR++ +DLEP VI+ ++TG YR +++PE GK A NN+ G+ T G+++ + ++ I + AD L+GF++ H++ + KK ++V+P + VV PYNS+L+ L ++ D V+LDN A+ I L ++ P++ N+LVS V+S+ T +LR+ G ++ D+ +L+P PR HF+++SY P E+A + +V ++ +P + M P Sbjct: 3 REIITIQAGQCGNSIGSQFWQQLCLEHGISQDGTIEDFATEGG--DRKDVFFYQSDDTRYIPRSILIDLEPRVINTIQTGPYRNIYNPENFYVGKSGLGAGNNWGDGYQT-GEQVHEEIMEMIEREADGSDSLEGFMMLHSIAGGTGSGLGSFLLERLNDRFPKKIIQTYSVFPDTTSAGDVVVHPYNSLLAMRRLTQNADSVVVLDNGALSHIAADRLHVQEPSFQQTNQLVSTVMSASTTTLRYPGYMHNDLVSILASLIPTPRCHFLMTSYTPFTGDQVEQAKTVRKTTVLDVMRRLLQPKNRMVSTVP 311
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 1.685e-42 Identity = 105/317 (33.12%), Postives = 173/317 (54.57%), Query Frame = 3 Query: 42 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYH--EQLSVSEITNSAFEPSSMMAKCDPRHGKYMA 980 RE I+ +GQ G Q+G W+ C+EHGI P+G +L D V G +D + FF + +VPRAV +DLEP VI+ ++ AY L++PE + K A NN+ RG YT +++ D L+ I + AD L+GF++ H++ Y KK ++V+P + VV+PYN +LS L + D V+LDN A+ I L I +PT++ +N +VS V+++ T +LR+ G +N D+ +LVP PR HF+++ Y P +S ++ ++ + +V ++ + ++M + G YM+ Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEG-ILEDFAVNG-EDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSAYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTP-LSLDQKFNSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMS 313
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.200e-42 Identity = 105/316 (33.23%), Postives = 170/316 (53.80%), Query Frame = 3 Query: 42 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK-AYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMA 980 RE I+ +GQ G Q+G W+ C+EHGI P+G +L D V G +D + FF + +VPRAV +DLEP VI+ ++ AY L++PE + K A NN+ RG YT +++ D L+ I + AD L+GF++ H++ Y KK ++V+P + VV+PYN +LS L + D V+LDN A+ I L I +PT++ +N +VS V+++ T +LR+ G +N D+ +LVP PR HF+++ Y P+ +K + +V ++ + ++M + G YM+ Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEG-ILEDFAVNG-EDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSAYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFTSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMS 313 The following BLAST results are available for this feature:
BLAST of DY262489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 426
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262489 ID=DY262489; Name=DY262489; organism=Citrus clementina; type=EST; length=1338bpback to top |