DY262489

Overview
NameDY262489
Unique NameDY262489
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1338
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1)

HSP 1 Score: 561.992 bits (1447), Expect = 2.762e-160
Identity = 271/320 (84.69%), Postives = 290/320 (90.62%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIH+GQAGIQVGNACWEL+CLEHGIQPDGQM SDK     DDAFNTFFSETGAGKHVPR VF+DLEPTV+DEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKE++D+CLDRIRKLADNCTGLQGFL+F AV                 VDYGKKSKL F  +PSPQVST+VVEPYNSVLSTHSLLEHTDV+++LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV+SAEKAYHEQLSVSEITNSAFEP++MMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPSDKASRANDDAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAVGGGTGSGFGCLMLERLSVDYGKKSKLNFCCWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 2.762e-160
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTIQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_TRYBR (Tubulin alpha chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1)

HSP 1 Score: 561.222 bits (1445), Expect = 6.140e-160
Identity = 271/320 (84.69%), Postives = 290/320 (90.62%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE I IHIGQAG QVGNACWEL+CLEHGIQPDG M SDKT+G  DDAFNTFFSETGAGKHVPRAVFLDLEPTV+DEVRTG YRQLFHPEQLISGKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLV+HAV                 VDYGKKSKLG+TVYPSPQVST+VVEPYNSVLSTHSLLEHTDV+ +LDNEAIYD+ RR+LDIERPTYTNLNRL+ QV+SSLTASLRFDGALNVD+TEFQTNLVPYPRIHF+L+SYAPVISAEKAYHEQLSVSEI+N+ FEP+SMM KCDPRHGKYMACCLMYR
Sbjct:    1 MREAICIHIGQAGCQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYDLTRRNLDIERPTYTNLNRLIGQVVSSLTASLRFDGALNVDLTEFQTNLVPYPRIHFVLTSYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.1794 bits (56), Expect = 6.140e-160
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTIQFVDWSPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2)

HSP 1 Score: 555.829 bits (1431), Expect = 1.957e-158
Identity = 267/320 (83.44%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIH+GQAGIQVGNACWEL+CLEHGIQPDGQM  D+     DDAFNTFFSETGAGKHVPR VF+DLEPTV+DEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKE++D+CLDRIRKLADNCTGLQGFL+F AV                 VDYGKKSKL F  +PSPQVST+VVEPYNSVLSTHSLLEHTDV+++LDNEAIYDIC+++LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV+SAEKAYHEQLSVSEITNSAFEP++MMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPPDQAGRANDDAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAVGGGTGSGFGCLMLERLSVDYGKKSKLNFCCWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYDICKKNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.957e-158
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTIQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 556.214 bits (1432), Expect = 1.957e-158
Identity = 267/320 (83.44%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE I IHIGQAG QVGNACWEL+CLEHGIQPDG M SDKT+G  DDAFNTFFSETGAGKHVPRAVFLDLEPTV+DE+RTG YRQLFHPEQLISGKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLV+HAV                 VDYGKKSKLG+TVYPSPQVST+VVEPYNSVLSTHSLLEHTDV+ +LDNEAIYD+ R +LDIERPTYTNLNRL+ QV+S+LTASLRFDGALNVD+TEFQTNLVPYPRIHF+L++YAPVISAEKAYHEQLSVSEI+N+ FEP+SMM KCDPRHGKYMACCLMYR
Sbjct:    1 MREAICIHIGQAGCQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEIRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYDLTRANLDIERPTYTNLNRLIGQVVSALTASLRFDGALNVDLTEFQTNLVPYPRIHFVLTTYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.1794 bits (56), Expect = 1.957e-158
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVATIKTKRTIQFVDWSPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1)

HSP 1 Score: 555.444 bits (1430), Expect = 2.555e-158
Identity = 263/320 (82.19%), Postives = 290/320 (90.62%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE +SIHIGQAG QVGNACWELYCLEHGI+PDGQM SDK+VGGGDDAFNTFFSET +GKHVPRA+FLDLEPTVIDE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYT+GKE+VDLCLDR+RKLAD C+GLQGFLVFH+V                 VDYGKKSKL F VYPSPQVST+VVEPYNSVLSTH LLEHTDV+ +LDNEAIYD+C+RSLDIERP+Y NLNRLV+QVISSLT SLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAPVISAEKA+HEQLSV+E+TN+ F+PSSMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREILSIHIGQAGAQVGNACWELYCLEHGIKPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIFLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELVDLCLDRVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTAVVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKRSLDIERPSYANLNRLVAQVISSLTTSLRFDGALNVDITEFQTNLVPYPRIHFMLASYAPVISAEKAFHEQLSVAELTNTVFDPSSMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 2.555e-158
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVAVIKTKRTIQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 557.755 bits (1436), Expect = 5.416e-158
Identity = 281/380 (73.95%), Postives = 310/380 (81.58%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYRRRRGTKRCERSSGSNQD*EENPIRGTG-AQLGFRWGNKYPPPIGWFLWGGFWLRVQK-VC 1172
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQM SDKT+GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTG YRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFHA                  VDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD +  LDNEA+YD+CRR+LDIERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSV+EITNS FEP+ MM  CDPRHGKYMACCLMYR     K    +  + +   +  I+       GF+ G  Y PP    + GG   RVQ+ VC
Sbjct:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK--TKRTIQFVDWCPTGFKCGINYQPPT--VVPGGDLARVQRAVC 376          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1_ARATH (Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 551.977 bits (1421), Expect = 2.807e-157
Identity = 268/320 (83.75%), Postives = 285/320 (89.06%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG M SD TVG   DAFNTFFSET +G+HVPRAVFLDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIVD CL+R+RKLADNCTGLQGFLVF+AV                 VD+GKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTY+NLNRL+SQ ISSLT SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVIS+ KAYHEQ SV EIT S FEPS+MMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 2.807e-157
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNTAVAAIKAKRTIQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_TORMA (Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1)

HSP 1 Score: 551.592 bits (1420), Expect = 3.663e-157
Identity = 257/320 (80.31%), Postives = 290/320 (90.62%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVSEITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 3.663e-157
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRSIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1_PELFA (Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 553.903 bits (1426), Expect = 7.821e-157
Identity = 278/380 (73.16%), Postives = 311/380 (81.84%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYRRRRGTKRCERSSGSNQD*EENPIRGTG-AQLGFRWGNKYPPPIGWFLWGGFWLRVQK-VC 1172
            MRECISIHIGQAGIQVGNACWELYCLEHGIQP+GQM +D T GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTG+YRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVD+ LDRIRKL+DNCTGLQGFLVFHA                  VDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD +  LDNEA+YD+CRR+LDIERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSV+EITNS FEP+ MM KCDPRHGKYMACCLMYR     K    +  + +   +  I+       GF+ G  Y PP    + GG   RVQ+ VC
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPNGQMPADNTTGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGSYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDIVLDRIRKLSDNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK--TKRTIQFVDWCPTGFKCGINYQPPTA--VPGGDLARVQRAVC 376          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1)

HSP 1 Score: 550.436 bits (1417), Expect = 8.144e-157
Identity = 256/320 (80.00%), Postives = 290/320 (90.62%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 8.144e-157
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRSIQFVDWCPT-GFKVGINYQPP 360          
The following BLAST results are available for this feature:
BLAST of DY262489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 426
Match NameE-valueIdentityDescription
TBA_PLAFK2.762e-16084.69Tubulin alpha chain OS=Plasmodium falciparum (isol... [more]
TBA_TRYBR6.140e-16084.69Tubulin alpha chain OS=Trypanosoma brucei rhodesie... [more]
TBA_PLAYO1.957e-15883.44Tubulin alpha chain OS=Plasmodium yoelii yoelii GN... [more]
TBA_TRYCR1.957e-15883.44Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1[more]
TBAE_PHYPO2.555e-15882.19Tubulin alpha-2B chain OS=Physarum polycephalum GN... [more]
TBA2_PELFA5.416e-15873.95Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TU... [more]
TBA1_ARATH2.807e-15783.75Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=T... [more]
TBA_TORMA3.663e-15780.31Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1[more]
TBA1_PELFA7.821e-15773.16Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TU... [more]
TBA1B_RAT8.144e-15780.00Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tub... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AE03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262489 ID=DY262489; Name=DY262489; organism=Citrus clementina; type=EST; length=1338bp
CAATTCCCGACTCAAATCTCTAACAAAATCACACAAGAATGAGAGAATGC
ATCTCAATTCACATCGGCCAGGCCGGTATCCAGGTTGGTAATGCCTGCTG
GGAGCTCTATTGCCTCGAACATGGCATTCAGCCTGATGGGCAAATGTTAA
GTGACAAAACAGTCGGAGGCGGAGATGATGCTTTCAACACATTCTTCAGT
GAGACCGGCGCCGGAAAGCACGTGCCACGCGCCGTGTTTTTGGACCTTGA
ACCAACTGTAATCGATGAAGTGAGGACTGGCGCCTACCGTCAGTTATTTC
ACCCGGAGCAACTCATTAGCGGCAAAGAAGATGCTGCTAACAACTTTGCC
AGAGGTCACTACACAATTGGGAAAGAGATTGTGGATTTGTGCCTTGATAG
GATCAGGAAGTTAGCTGATAACTGTACCGGTCTACAAGGGTTCCTCGTGT
TCCACGCGGTTGGTGGAGGAACAGGATCCGGGCTCGGGTCTTTGCTCCTT
GAGAGGCTGTCTGTTGATTACGGCAAGAAATCGAAACTGGGATTTACCGT
TTACCCTTCACCTCAAGTTTCAACCTCAGTTGTTGAGCCTTACAACAGCG
TTTTGTCCACTCACTCTCTGTTAGAACACACTGACGTTTCTGTGTTGCTT
GACAATGAAGCAATCTACGATATTTGTCGCCGCTCACTCGATATCGAGAG
ACCCACTTATACCAATCTCAACAGACTTGTTTCTCAGGTGATTTCTTCAC
TAACGGCGTCTCTTCGTTTTGATGGAGCCTTAAACGTGGATGTGACAGAG
TTCCAAACAAATTTAGTCCCATACCCTCGGATTCACTTCATGCTTTCATC
ATATGCCCCTGTTATCTCAGCAGAGAAGGCCTACCACGAGCAACTATCAG
TGTCAGAAATCACAAACAGCGCATTTGAGCCCTCGTCAATGATGGCAAAA
TGTGACCCCCGCCATGGGAAATACATGGCATGTTGTTTGATGTACAGAAG
AAGACGTGGTACCAAAAGATGTGAACGCAGCAGTGGCAGCAATCAAGACT
AAGAAGAAAATCCAATTCGTGGGACGGGTGCCCAACTGGGGTTCAGGTGG
GGGAACAAATACCCACCCCCCATCGGGTGGTTCCTGTGGGGGGGATTTTG
GCTAAGGGTTCAAAAAGTCTGTGGGTTTAAAATTCAAAAACTAAAAAAAG
TTGGGGTGGAAGGGGTTTTCTCAAAAAATTTAATTAAAAAATTTTGAATT
TTGATTTTTTTCCCCAAAAAAAGGGGGGTTTGTTTGGTTCTTTTTTGTAT
TTGGGTGGGGGGAAAGGGGGGCGGGTGGGGGGAGAGAA
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