DY262489

Overview
NameDY262489
Unique NameDY262489
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1338
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1C_MOUSE (Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1)

HSP 1 Score: 549.28 bits (1414), Expect = 1.811e-156
Identity = 255/320 (79.69%), Postives = 290/320 (90.62%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+V+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.811e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1C_HUMAN (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1)

HSP 1 Score: 549.28 bits (1414), Expect = 1.811e-156
Identity = 255/320 (79.69%), Postives = 290/320 (90.62%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+V+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.811e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1C_CRIGR (Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1)

HSP 1 Score: 549.28 bits (1414), Expect = 1.811e-156
Identity = 255/320 (79.69%), Postives = 290/320 (90.62%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+V+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.811e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2)

HSP 1 Score: 552.362 bits (1422), Expect = 2.275e-156
Identity = 262/320 (81.88%), Postives = 288/320 (90.00%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIHIGQAG QVGNACWELYCLEHGI PDGQM SDK+VGGGDDAFNTFFSET +GKHVPRA++LDLEPTVIDE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDLCLDR+RKLAD C+GLQGFLVFH+V                 VDYGKKSKL F VYPSPQVST+VVEPYNSVLSTH LLEHTDV+ +LDNEAIYD+C++SLDI+RP+Y NLNRLV+QVISSLT SLRFDGALNVD+ EFQTNLVPYPRIHFML+SYAPVISAEKA+HEQLSV+E+TN+ FEPSSMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREIISIHIGQAGAQVGNACWELYCLEHGINPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIYLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLCLDRVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTAVVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKKSLDIDRPSYANLNRLVAQVISSLTTSLRFDGALNVDINEFQTNLVPYPRIHFMLASYAPVISAEKAFHEQLSVAELTNTVFEPSSMMAKCDPRHGKYMACCLMYR 320          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1A_RAT (Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1)

HSP 1 Score: 548.895 bits (1413), Expect = 2.363e-156
Identity = 255/320 (79.69%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 2.363e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1A_PANTR (Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1A PE=2 SV=1)

HSP 1 Score: 548.895 bits (1413), Expect = 2.363e-156
Identity = 255/320 (79.69%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 2.363e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1A_MOUSE (Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a PE=1 SV=1)

HSP 1 Score: 548.895 bits (1413), Expect = 2.363e-156
Identity = 255/320 (79.69%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 2.363e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1A_HUMAN (Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1)

HSP 1 Score: 548.895 bits (1413), Expect = 2.363e-156
Identity = 255/320 (79.69%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 2.363e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1A_CRIGR (Tubulin alpha-1A chain OS=Cricetulus griseus GN=TUBA1A PE=2 SV=1)

HSP 1 Score: 548.895 bits (1413), Expect = 2.363e-156
Identity = 255/320 (79.69%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 2.363e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 548.125 bits (1411), Expect = 4.025e-156
Identity = 269/320 (84.06%), Postives = 285/320 (89.06%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIH+GQAGIQ+GNACWEL+CLEHGIQPDGQM SDKT+GGGDDAFNTFFSETGA KHVPR VFLDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD CTGLQGFLVF++V                 VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDV+V+LDNEA+YDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYP +        P   AEKAYHEQLSV+EITNSAFEP+SMMAKCDPRHGKYMACCLMYR
Sbjct:    1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAEKHVPRCVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPSV-----IIRPSTPAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYR 315          

HSP 2 Score: 26.5646 bits (57), Expect = 4.025e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  317 DVVPKDVNAAVATIKTKRTIQFVDWCPT-GFKCGINYQPP 355          
The following BLAST results are available for this feature:
BLAST of DY262489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 426
Match NameE-valueIdentityDescription
TBA1C_MOUSE1.811e-15679.69Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c P... [more]
TBA1C_HUMAN1.811e-15679.69Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C P... [more]
TBA1C_CRIGR1.811e-15679.69Tubulin alpha-1C chain OS=Cricetulus griseus GN=TU... [more]
TBAN_PHYPO2.275e-15681.88Tubulin alpha-1B chain OS=Physarum polycephalum GN... [more]
TBA1A_RAT2.363e-15679.69Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tub... [more]
TBA1A_PANTR2.363e-15679.69Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1... [more]
TBA1A_MOUSE2.363e-15679.69Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a P... [more]
TBA1A_HUMAN2.363e-15679.69Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A P... [more]
TBA1A_CRIGR2.363e-15679.69Tubulin alpha-1A chain OS=Cricetulus griseus GN=TU... [more]
TBA1_STYLE4.025e-15684.06Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AE03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262489 ID=DY262489; Name=DY262489; organism=Citrus clementina; type=EST; length=1338bp
CAATTCCCGACTCAAATCTCTAACAAAATCACACAAGAATGAGAGAATGC
ATCTCAATTCACATCGGCCAGGCCGGTATCCAGGTTGGTAATGCCTGCTG
GGAGCTCTATTGCCTCGAACATGGCATTCAGCCTGATGGGCAAATGTTAA
GTGACAAAACAGTCGGAGGCGGAGATGATGCTTTCAACACATTCTTCAGT
GAGACCGGCGCCGGAAAGCACGTGCCACGCGCCGTGTTTTTGGACCTTGA
ACCAACTGTAATCGATGAAGTGAGGACTGGCGCCTACCGTCAGTTATTTC
ACCCGGAGCAACTCATTAGCGGCAAAGAAGATGCTGCTAACAACTTTGCC
AGAGGTCACTACACAATTGGGAAAGAGATTGTGGATTTGTGCCTTGATAG
GATCAGGAAGTTAGCTGATAACTGTACCGGTCTACAAGGGTTCCTCGTGT
TCCACGCGGTTGGTGGAGGAACAGGATCCGGGCTCGGGTCTTTGCTCCTT
GAGAGGCTGTCTGTTGATTACGGCAAGAAATCGAAACTGGGATTTACCGT
TTACCCTTCACCTCAAGTTTCAACCTCAGTTGTTGAGCCTTACAACAGCG
TTTTGTCCACTCACTCTCTGTTAGAACACACTGACGTTTCTGTGTTGCTT
GACAATGAAGCAATCTACGATATTTGTCGCCGCTCACTCGATATCGAGAG
ACCCACTTATACCAATCTCAACAGACTTGTTTCTCAGGTGATTTCTTCAC
TAACGGCGTCTCTTCGTTTTGATGGAGCCTTAAACGTGGATGTGACAGAG
TTCCAAACAAATTTAGTCCCATACCCTCGGATTCACTTCATGCTTTCATC
ATATGCCCCTGTTATCTCAGCAGAGAAGGCCTACCACGAGCAACTATCAG
TGTCAGAAATCACAAACAGCGCATTTGAGCCCTCGTCAATGATGGCAAAA
TGTGACCCCCGCCATGGGAAATACATGGCATGTTGTTTGATGTACAGAAG
AAGACGTGGTACCAAAAGATGTGAACGCAGCAGTGGCAGCAATCAAGACT
AAGAAGAAAATCCAATTCGTGGGACGGGTGCCCAACTGGGGTTCAGGTGG
GGGAACAAATACCCACCCCCCATCGGGTGGTTCCTGTGGGGGGGATTTTG
GCTAAGGGTTCAAAAAGTCTGTGGGTTTAAAATTCAAAAACTAAAAAAAG
TTGGGGTGGAAGGGGTTTTCTCAAAAAATTTAATTAAAAAATTTTGAATT
TTGATTTTTTTCCCCAAAAAAAGGGGGGTTTGTTTGGTTCTTTTTTGTAT
TTGGGTGGGGGGAAAGGGGGGCGGGTGGGGGGAGAGAA
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