DY262489

Overview
NameDY262489
Unique NameDY262489
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1338
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA_XENLA (Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2)

HSP 1 Score: 547.74 bits (1410), Expect = 5.253e-156
Identity = 254/320 (79.38%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+V++ITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 5.253e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRSIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA2_ELEIN (Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 547.74 bits (1410), Expect = 5.253e-156
Identity = 266/320 (83.12%), Postives = 286/320 (89.38%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG M SD ++G   DAFNTFFSETGAGKHVPRA+F+DLEPTVIDEV+TG YRQLFHPEQLIS KEDAANNFARGHYT+G+EIVD CLDRIRKLADNCTGLQGFLVF+AV                 VDYG+KSKLGFT+YPSPQ+ST+VVEPYNSVLSTHSL+EHTDV VLLDNEAIYDIC+RSLDIERPTYTNLNRL+SQVISSLT SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAP+IS EKAYHEQ SV EITNS FE SS+MAKCDPRHGKYMACCLMYR
Sbjct:    1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSLGVARDAFNTFFSETGAGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREIVDPCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAYHEQHSVPEITNSVFESSSVMAKCDPRHGKYMACCLMYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 5.253e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAVHSIKTKRTVQFVDWCPT-GFKCGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1D_BOVIN (Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=1 SV=1)

HSP 1 Score: 547.354 bits (1409), Expect = 6.856e-156
Identity = 252/320 (78.75%), Postives = 289/320 (90.31%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKE++DL LDRIRKLAD CTGLQGFL+FH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 6.856e-156
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1_DROME (Tubulin alpha-1 chain OS=Drosophila melanogaster GN=alphaTub84B PE=2 SV=1)

HSP 1 Score: 546.584 bits (1407), Expect = 1.168e-155
Identity = 254/320 (79.38%), Postives = 287/320 (89.69%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKTVGGGDD+FNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+FH+                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACC++YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.168e-155
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA3_RAT (Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 1.524e-155
Identity = 253/320 (79.06%), Postives = 288/320 (90.00%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+FH+                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACC++YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.524e-155
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA3_MOUSE (Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE=1 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 1.524e-155
Identity = 253/320 (79.06%), Postives = 288/320 (90.00%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+FH+                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACC++YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.524e-155
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA3_BOVIN (Tubulin alpha-3 chain OS=Bos taurus GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 1.524e-155
Identity = 253/320 (79.06%), Postives = 288/320 (90.00%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+FH+                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACC++YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.524e-155
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA3C_HUMAN (Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3)

HSP 1 Score: 546.199 bits (1406), Expect = 1.524e-155
Identity = 253/320 (79.06%), Postives = 288/320 (90.00%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+FH+                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACC++YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 1.524e-155
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1_PARLI (Tubulin alpha-1 chain OS=Paracentrotus lividus PE=2 SV=1)

HSP 1 Score: 545.043 bits (1403), Expect = 3.388e-155
Identity = 250/320 (78.12%), Postives = 288/320 (90.00%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYT+GKE++D+ LDRIRKLAD CTGLQGFL+FH+                  VDYGKKSKL F VYP+PQ+ST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+VSEITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 3.388e-155
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPP 360          
BLAST of DY262489 vs. ExPASy Swiss-Prot
Match: TBA1A_PIG (Tubulin alpha-1A chain OS=Sus scrofa GN=TUBA1A PE=1 SV=1)

HSP 1 Score: 544.658 bits (1402), Expect = 4.422e-155
Identity = 253/320 (79.06%), Postives = 287/320 (89.69%), Query Frame = 3
Query:   39 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 998
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGF VFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPR HF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YR
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320          

HSP 2 Score: 26.5646 bits (57), Expect = 4.422e-155
Identity = 17/40 (42.50%), Postives = 17/40 (42.50%), Query Frame = 1
Query: 1003 DVVPKDVNXXXXXXXXXXXXQFVGRVPNWGSGGGTNTHPP 1122
            DVVPKDVN            QFV   P  G   G N  PP
Sbjct:  322 DVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYEPP 360          
The following BLAST results are available for this feature:
BLAST of DY262489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 426
Match NameE-valueIdentityDescription
TBA_XENLA5.253e-15679.38Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2... [more]
TBA2_ELEIN5.253e-15683.13Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 ... [more]
TBA1D_BOVIN6.856e-15678.75Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=... [more]
TBA1_DROME1.168e-15579.38Tubulin alpha-1 chain OS=Drosophila melanogaster G... [more]
TBA3_RAT1.524e-15579.06Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba... [more]
TBA3_MOUSE1.524e-15579.06Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE... [more]
TBA3_BOVIN1.524e-15579.06Tubulin alpha-3 chain OS=Bos taurus GN=TUBA3 PE=2 ... [more]
TBA3C_HUMAN1.524e-15579.06Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C... [more]
TBA1_PARLI3.388e-15578.13Tubulin alpha-1 chain OS=Paracentrotus lividus PE=... [more]
TBA1A_PIG4.422e-15579.06Tubulin alpha-1A chain OS=Sus scrofa GN=TUBA1A PE=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AE03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262489 ID=DY262489; Name=DY262489; organism=Citrus clementina; type=EST; length=1338bp
CAATTCCCGACTCAAATCTCTAACAAAATCACACAAGAATGAGAGAATGC
ATCTCAATTCACATCGGCCAGGCCGGTATCCAGGTTGGTAATGCCTGCTG
GGAGCTCTATTGCCTCGAACATGGCATTCAGCCTGATGGGCAAATGTTAA
GTGACAAAACAGTCGGAGGCGGAGATGATGCTTTCAACACATTCTTCAGT
GAGACCGGCGCCGGAAAGCACGTGCCACGCGCCGTGTTTTTGGACCTTGA
ACCAACTGTAATCGATGAAGTGAGGACTGGCGCCTACCGTCAGTTATTTC
ACCCGGAGCAACTCATTAGCGGCAAAGAAGATGCTGCTAACAACTTTGCC
AGAGGTCACTACACAATTGGGAAAGAGATTGTGGATTTGTGCCTTGATAG
GATCAGGAAGTTAGCTGATAACTGTACCGGTCTACAAGGGTTCCTCGTGT
TCCACGCGGTTGGTGGAGGAACAGGATCCGGGCTCGGGTCTTTGCTCCTT
GAGAGGCTGTCTGTTGATTACGGCAAGAAATCGAAACTGGGATTTACCGT
TTACCCTTCACCTCAAGTTTCAACCTCAGTTGTTGAGCCTTACAACAGCG
TTTTGTCCACTCACTCTCTGTTAGAACACACTGACGTTTCTGTGTTGCTT
GACAATGAAGCAATCTACGATATTTGTCGCCGCTCACTCGATATCGAGAG
ACCCACTTATACCAATCTCAACAGACTTGTTTCTCAGGTGATTTCTTCAC
TAACGGCGTCTCTTCGTTTTGATGGAGCCTTAAACGTGGATGTGACAGAG
TTCCAAACAAATTTAGTCCCATACCCTCGGATTCACTTCATGCTTTCATC
ATATGCCCCTGTTATCTCAGCAGAGAAGGCCTACCACGAGCAACTATCAG
TGTCAGAAATCACAAACAGCGCATTTGAGCCCTCGTCAATGATGGCAAAA
TGTGACCCCCGCCATGGGAAATACATGGCATGTTGTTTGATGTACAGAAG
AAGACGTGGTACCAAAAGATGTGAACGCAGCAGTGGCAGCAATCAAGACT
AAGAAGAAAATCCAATTCGTGGGACGGGTGCCCAACTGGGGTTCAGGTGG
GGGAACAAATACCCACCCCCCATCGGGTGGTTCCTGTGGGGGGGATTTTG
GCTAAGGGTTCAAAAAGTCTGTGGGTTTAAAATTCAAAAACTAAAAAAAG
TTGGGGTGGAAGGGGTTTTCTCAAAAAATTTAATTAAAAAATTTTGAATT
TTGATTTTTTTCCCCAAAAAAAGGGGGGTTTGTTTGGTTCTTTTTTGTAT
TTGGGTGGGGGGAAAGGGGGGCGGGTGGGGGGAGAGAA
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