DY262490

Overview
NameDY262490
Unique NameDY262490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1206
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY262490 vs. ExPASy Swiss-Prot
Match: HPPA_THETN (Pyrophosphate-energized proton pump OS=Thermoanaerobacter tengcongensis GN=hppA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.026e-11
Identity = 58/189 (30.69%), Postives = 88/189 (46.56%), Query Frame = 3 
Query:  246 KCAEIQNAISVGATSFLFPQYKYLSVVMGVFSTIIFL--FQGSVKGFSTKHEPCTYNTGIMCKPALVNAIFSTIAFLLGALTSTLSGFLGMKITTYANARTTLEARKGVSKAFITAFRARAVMGXXXXXXXXXXXYVSINLFKLY-----YDDDWEGLYESITGYDLSGSSMALFGRVGGGIYTKAVDV 791
            K  +I +AI  GA +FL  QYK ++ +  + + II +  + G +   S++              AL  A+    AF+ GA  S LSG++GM +   +N R    AR G+++A   A +  AV G           +    LF  Y      D+  +     I G+    S +ALF ++GGGIYTKA DV
Sbjct:   35 KMQQISDAIKEGAMAFLNRQYKTIASLALIVAVIIVVANYYGHLSEGSSQ--------------ALSFALHVGFAFITGAFCSALSGYIGMYMAVNSNIRAAAGARSGLNRALQIALKGGAVTG---LAVTALSLFGVATLFLAYGGLSGQDELIKEAPSLIVGFGFGASFVALFAQLGGGIYTKAADV 206
The following BLAST results are available for this feature:
BLAST of DY262490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
HPPA_THETN1.026e-1130.69Pyrophosphate-energized proton pump OS=Thermoanaer... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AE04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262490 ID=DY262490; Name=DY262490; organism=Citrus clementina; type=EST; length=1206bp
ATTTTCAAGAAACAAAGTGATCATCAATAGTGAGTTCATTTATGGAAATG
GCTTCATGGAGTGAGGGGCATACACAAGTTCTGACACCCGCAGCTGCTTT
TATAGGAATTGGTTTTGCTTTGATTCTGTGGGTATTGGTCTCAAAGGTTA
AGATCTCAAATGGAGCTGGTAGCAATGGCGATGATGATAGGTTGATTGAA
GAAGAAGAGGCAGAGGAGGGTGTTGATAGCCTTGAGGCTGCCATCAAGTG
TGCTGAAATTCAAAATGCCATTTCTGTTGGGGCAACATCATTTTTGTTTC
CACAGTACAAGTACCTCAGTGTGGTCATGGGCGTATTCAGCACCATCATC
TTCCTTTTCCAAGGTTCGGTTAAGGGCTTCAGCACCAAACATGAACCCTG
CACATACAACACAGGGATTATGTGCAAACCAGCTCTTGTAAATGCTATTT
TTAGCACCATTGCTTTCTTGCTCGGAGCCCTTACTTCAACCCTCTCAGGT
TTTCTTGGCATGAAGATCACAACCTATGCAAATGCCAGAACAACTTTAGA
AGCAAGGAAAGGAGTCAGCAAGGCTTTTATTACAGCTTTCCGAGCTCGTG
CAGTGATGGGCTTGCTCCTTGCTGCCAATTGCCTTTTGGTGTTGTATGTC
TCCATCAATTTATTCAAACTCTATTATGATGATGACTGGGAGGGACTTTA
TGAATCTATTACTGGTTATGATTTAAGTGGCTCCTCAATGGCACTCTTTG
GAAGAGTTGGGGGAGGTATATATACAAAAGCAGTTGATGTANGAAGCTGA
CCTTGTAGGAAAAGTTGAGAGAAATATTCCTGAAGACGATCCATGAAACC
CAGCGGTTATTGCTGACAATGTGGGCTACAATGTAGGAGAATCGCTGGGA
TGGGGTTTTGATCTTTTTGGATCATATGCAGTCATCCTGTGCAGCACTCT
ATGTTGCATTGGTATCATCCTTCAATATCAGCCATGTCCTATTCCCTGAT
CATAGCTCAAGGGGAATAGTGGTTTGCATGATTACACGCTTTTTGCTTCT
GACTGGTTTCAAATTAAAATCCCCTTTTGCTTTGGCCATAAAAATCCGTT
CTCCTCGAATTCCGGACCCAAAAACGGCCAAAAATTGGCACCCTTTCTTT
TTGGGTTGTCAAACTGGCCTTGGGGGGGCGGGACTTGGTAAATCCTCCAT
CCCCCC
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