DY262499

Overview
NameDY262499
Unique NameDY262499
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1240
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_YEAS7 (Autophagy-related protein 18 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG18 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.683e-18
Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888
            +++NQ   C + GTS GF+I+NCEPF + +  D  SGG+ IVEMLF  ++LALVG GD     P ++ I +  +   I E  F + + SVK+++ R+VV+L+ +
Sbjct:   11 INFNQTGTCISLGTSKGFKIFNCEPFGKFYSED--SGGYAIVEMLFSTSLLALVGIGDQPALSPRRLRIINTKKHSIICEVTFPTSILSVKMNKSRLVVLLQEQ 112          

HSP 2 Score: 27.335 bits (59), Expect = 2.683e-18
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKGAL 962
            IY+Y    ++LLH IET  N +G +
Sbjct:  113 IYIYDINTMRLLHTIETNPNPRGLM 137          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: HSV2_YARLI (SVP1-like protein 2 OS=Yarrowia lipolytica GN=HSV2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.295e-17
Identity = 43/114 (37.72%), Postives = 72/114 (63.16%), Query Frame = 1
Query:  547 SDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888
            + +++  +++ ++NQD  CFA   + GFR+Y  +P     +R+   GG  +++ML R N LA+VG G N ++P  K++IWDD +S+      F S V +V LSR +IVVVL+++
Sbjct:   10 ASMEDQPILNAAFNQDSACFAICHNRGFRVYVTDPMDLRVQREFDDGGIGVIQMLHRTNYLAVVGGGSNPKFPQNKLVIWDDLKSKPALSLEFLSPVLNVLLSRTKIVVVLQNK 123          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_KLULA (Autophagy-related protein 18 OS=Kluyveromyces lactis GN=ATG18 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.296e-17
Identity = 39/104 (37.50%), Postives = 66/104 (63.46%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888
            +++NQ+  C + GTS GF+I+NCEPF   ++ +   GG  IVEMLF  ++LA+VG GDN    P ++ + +  +   I E  F + + SVK+++ R+ V+L+ +
Sbjct:   10 INFNQNGSCISMGTSQGFKIFNCEPFGRFYQDE--EGGCGIVEMLFSTSLLAVVGMGDNPAMSPRRLRMLNTKRHSVICEVTFPTTILSVKMNKSRLAVLLQEQ 111          

HSP 2 Score: 30.8018 bits (68), Expect = 1.296e-17
Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKGAL 962
            IY+Y   N++LLH IET  N +G +
Sbjct:  112 IYIYDISNMRLLHTIETSMNAQGIM 136          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG21_PICAN (Autophagy-related protein 21 OS=Pichia angusta GN=ATG21 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.841e-17
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 1
Query:  568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879
            L S+S+NQDY C AAG    +++YNC+PF E F++    GG  +VEMLF  +++A+VG GD       K+ I +  +   I E  F + +  VK++R+R+VVVL
Sbjct:    3 LRSISFNQDYTCLAAGFDAAYKVYNCDPFGECFQK-ADDGGANLVEMLFSTSLIAVVGIGDKPANTMRKLKIINTKRKAVICELTFPTAILYVKMNRKRLVVVL 105          

HSP 2 Score: 24.2534 bits (51), Expect = 4.841e-17
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKGALL 965
            I+VY    +KLLH IE  A L   ++
Sbjct:  109 IFVYDVSCMKLLHSIEASAGLDDRII 134          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: HSV2_DEBHA (SVP1-like protein 2 OS=Debaryomyces hansenii GN=HSV2 PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 3.189e-16
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 1
Query:  559 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPF----KETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHRYM 894
            E++++++++NQD GCFA G   GF +YN  P     K  F  +    G   + ML R N LALVG G N ++   K++IWDD + +      F S V +V LSR RI+VVL+++ +
Sbjct:   15 ELQILNINFNQDQGCFAVGHEYGFLVYNTNPIDIRVKRNFNINGHGSGIAHITMLHRTNYLALVGGGKNPKFANNKLVIWDDLKRKNSLNLEFMSPVLNVLLSRIRIIVVLKNQVL 130          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_CRYNE (Autophagy-related protein 18 OS=Cryptococcus neoformans GN=ATG18 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.937e-16
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 1
Query:  565 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNS-QYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEH 885
            +L+S ++NQDY C A G   G+ I NC+PF +    +   G   IVEMLF  +++ALVGA +N     P K+ I +  +   I E  F + V +VK++R+R++VVLE+
Sbjct:   10 DLLSCNFNQDYSCIAVGHKKGYTILNCDPFGKVHSNN-DQGATGIVEMLFCTSLVALVGAAENQPSNSPRKLQIVNTKRQSTICELIFPTSVLAVKMNRKRLIVVLEN 116          

HSP 2 Score: 27.7202 bits (60), Expect = 3.937e-16
Identity = 19/47 (40.43%), Postives = 22/47 (46.81%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKG--ALLSFS*SEYLRVGLPGSSTGN 1022
            IY+Y    +KLLH IET  N     AL S S   YL    P  S  +
Sbjct:  118 IYIYDISTMKLLHTIETGPNPNAVCALSSSSERSYLAYPSPVPSASS 164          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_ASHGO (Autophagy-related protein 18 OS=Ashbya gossypii GN=ATG18 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.452e-15
Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888
            +++NQ   C + GTS G +I+NC+PF   +  +   GG  IVEMLF  ++LA+VG GDN    P ++ I +  +   I E  F + + +VK++R R+VV+L+ +
Sbjct:   12 INFNQTGTCISMGTSEGLKIFNCDPFGRFYSDE--DGGCGIVEMLFSTSLLAVVGIGDNPSMSPRRLRILNTKRHSVICEVTFPTTILAVKMNRSRLVVLLQEQ 113          

HSP 2 Score: 26.9498 bits (58), Expect = 1.452e-15
Identity = 13/29 (44.83%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKGALLSFS 974
            IY+Y   +++LL+ IET +N +G L+S S
Sbjct:  114 IYIYDINSMRLLYTIETSSNPRG-LISMS 141          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_USTMA (Autophagy-related protein 18 OS=Ustilago maydis GN=ATG18 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.457e-15
Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGD---NSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882
            L+SV++NQD+ C A GT  G+ I NCEPF   +  +  +G   +VEMLF  +++ALV   D    S   P ++ I +  +   I E  F + +  VKL+R R+VVVLE
Sbjct:   14 LLSVNFNQDHSCIAVGTRDGYSITNCEPFGRVYTNN--AGPTSLVEMLFCTSLVALVATSDTDPKSNASPRRLQIVNTKRQSVICELLFPTAILGVKLNRRRLVVVLE 119          

HSP 2 Score: 29.261 bits (64), Expect = 1.457e-15
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLAN 947
            IY+Y   N+KLLH IET  N
Sbjct:  122 IYIYDISNMKLLHTIETSPN 141          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_CANGA (Autophagy-related protein 18 OS=Candida glabrata GN=ATG18 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.067e-15
Identity = 51/152 (33.55%), Postives = 76/152 (50.00%), Query Frame = 1
Query:  562 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHRYMFIVXXXXXXXXXXXXXXXXXXXXXXXHNPSTSVLACPGPQR 1017
            + +  +++NQ   C + GTS GF I+NC PF + +  D  SGG+ IVEMLF  ++LALVG GD     P ++ I +  +   I E  F + + SVK++R RIVVVL+ +                             N  T++LA P P +
Sbjct:    6 VSIYYLNFNQTGTCISMGTSNGFLIFNCAPFGKFYSED--SGGYGIVEMLFSTSLLALVGIGDQPMLSPRRLRIINTKKHSIICEVTFPTKILSVKMNRSRIVVVLKEQIYIYDINNMRLLHTIEIAPNPEGLVALSCNTDTNLLAYPSPPK 155          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: WIPI4_XENLA (WD repeat domain phosphoinositide-interacting protein 4 OS=Xenopus laevis GN=wdr45 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.014e-15
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 1
Query:  583 WNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH---QSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888
            +NQD  CF      G RI+N EP  E    D +  G    VEML RCN+LALVG G N ++    V+IWDD    + + + EF F   V SV+L  ++IV+ L++R
Sbjct:   12 FNQDQSCFCCAMETGVRIFNIEPLMEKGHLDQEQVGSVGQVEMLHRCNLLALVGGGSNPKFSDISVLIWDDSRDGKDKLVLEFTFTKPVLSVRLRSDKIVIALKNR 117          
The following BLAST results are available for this feature:
BLAST of DY262499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ATG18_YEAS72.683e-1841.35Autophagy-related protein 18 OS=Saccharomyces cere... [more]
HSV2_YARLI1.295e-1737.72SVP1-like protein 2 OS=Yarrowia lipolytica GN=HSV2... [more]
ATG18_KLULA1.296e-1737.50Autophagy-related protein 18 OS=Kluyveromyces lact... [more]
ATG21_PICAN4.841e-1741.35Autophagy-related protein 21 OS=Pichia angusta GN=... [more]
HSV2_DEBHA3.189e-1638.79SVP1-like protein 2 OS=Debaryomyces hansenii GN=HS... [more]
ATG18_CRYNE3.937e-1639.81Autophagy-related protein 18 OS=Cryptococcus neofo... [more]
ATG18_ASHGO1.452e-1537.50Autophagy-related protein 18 OS=Ashbya gossypii GN... [more]
ATG18_USTMA1.457e-1539.81Autophagy-related protein 18 OS=Ustilago maydis GN... [more]
ATG18_CANGA2.067e-1533.55Autophagy-related protein 18 OS=Candida glabrata G... [more]
WIPI4_XENLA6.014e-1541.51WD repeat domain phosphoinositide-interacting prot... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AF01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262499 ID=DY262499; Name=DY262499; organism=Citrus clementina; type=EST; length=1240bp
CTCTCACAAAGCGAAAGAGAAAATTTGATCTGATGATCATTAATTTGATT
TCTCATATCACAGCATCAAGGTTAGTGTCTCTATTCGATTTCTGCTTTCT
GTACTCTTCGATTAAATCACTTTATTTGTTTGGAATTATATAATATAGTA
AGGAATCAGGAGGCCCGACTGATATTTTCACGATCGCAAATTTCCCGTTT
CTGATCATTGATCACTGGCTGCTGCCTGCTGGTGATTAGATGCATTAACT
CTACATGCTATGAGAGATACAGAAGTTTGCAGAATCTGTGGGAATTAGCG
TATTTGTATGACATTTCATAATATTGTGTGAATACAGGGGGTGCCACTGA
AATTATTCACAATCGAGAAGATTTTCATATTTGATTGCTGCTGCTGCTGC
TGCTGCTGCTGACCCTTTCTTCGTCCCACATGACTTCAACTGTTTCGACA
TCTCGAGAAATTCTTCCACCGGGCCCCTTTGGATCCCCCAATGCTGGGGC
TTCGGCTTCGGCTTTGGCTTCATTTGGCCACCCGCAAACGGGGTTCAGTG
ATGTTGACGAAATTGAGTTGATCTCTGTGTCTTGGAACCAGGACTATGGT
TGTTTTGCCGCTGGAACTAGTTGTGGGTTTCGAATTTATAATTGTGAGCC
GTTTAAGGAAACTTTTAGACGTGATTTGAAAAGTGGTGGGTTTAGGATTG
TTGAGATGTTGTTTCGTTGTAATATATTGGCACTCGTTGGTGCTGGGGAT
AATTCTCAGTATCCTCCTACTAAAGTTATTATTTGGGATGATCATCAGAG
CAGGTGCATTGGTGAGTTTGCGTTTAGGTCTGATGTTCGCTCTGTGAAAT
TGAGTAGGGAACGAATTGTGGTTGTTCTTGAGCATAGATATATGTTTATA
GTTTTGTTAATCTCAAGTTGCTTCATCAGATTGAGACTCTCGCGAATCTG
AAGGGGGCTTTGTTGTCTTTCTCATAATCCGAGTACCTCCGTGTTGGCTT
GCCCGGGTCCTCAACGGGGAACGGTTTCCATTTGACAATTTGGGGCTCAA
TATGAAAAAGCTAAAAAATGGCCCAGGATTTTCCAATGGGGTGCCTTTAC
CCTCAAATTGGAAGGGGCGGCTTTTTTGCCACCTGGCAAAAACCCAGGGG
GCCATTTTGTAAAAAAAAATTTTTAAACACCGGGGGGGAGGGGGACTCCC
CTTTGGCCAGAAAAGGTTCCAAAAAAAAGGGTGTGTAACA
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